RNA–Protein interactions for RNA: ENST00000518279.5

TNPO1-211, Transcript of transportin 1, humanhuman

TSL 4

Gene TNPO1, Length 563 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNPO1-211ENST00000518279 CHD9Q3L8U1 2897 aa20.17■□□□□ 0.82
TNPO1-211ENST00000518279 CLTBP09497 229 aa20.17■□□□□ 0.82
TNPO1-211ENST00000518279 TSHZ3Q63HK5 1081 aa20.17■□□□□ 0.82
TNPO1-211ENST00000518279 AMOTL1Q8IY63 956 aa20.17■□□□□ 0.82
TNPO1-211ENST00000518279 MAFAQ8NHW3 353 aaPredicted RBP20.17■□□□□ 0.82
TNPO1-211ENST00000518279 NUP88Q99567 741 aaPredicted RBP20.17■□□□□ 0.82
TNPO1-211ENST00000518279 GOPCQ9HD26 462 aa20.17■□□□□ 0.82
TNPO1-211ENST00000518279 TACC3Q9Y6A5 838 aa20.17■□□□□ 0.82
TNPO1-211ENST00000518279 ROBO3Q96MS0 1386 aa20.17■□□□□ 0.82
TNPO1-211ENST00000518279 PQBP1O60828 265 aaKnown RBP20.16■□□□□ 0.82
TNPO1-211ENST00000518279 ADAMTS4O75173 837 aa20.16■□□□□ 0.82
TNPO1-211ENST00000518279 KIAA0355O15063 1070 aa20.15■□□□□ 0.82
TNPO1-211ENST00000518279 AKR1A1P14550 325 aa20.15■□□□□ 0.82
TNPO1-211ENST00000518279 ZSCAN25Q6NSZ9 544 aa20.15■□□□□ 0.82
TNPO1-211ENST00000518279 STK11IPQ8N1F8 1099 aa20.15■□□□□ 0.82
TNPO1-211ENST00000518279 DDRGK1Q96HY6 314 aa20.15■□□□□ 0.82
TNPO1-211ENST00000518279 GPATCH3Q96I76 525 aa20.15■□□□□ 0.82
TNPO1-211ENST00000518279 RIPK3Q9Y572 518 aa20.15■□□□□ 0.82
TNPO1-211ENST00000518279 SYNRGQ9UMZ2 1314 aa20.14■□□□□ 0.81
TNPO1-211ENST00000518279 SNAI1O95863 264 aaPredicted RBP20.14■□□□□ 0.81
TNPO1-211ENST00000518279 RAG1P15918 1043 aa20.14■□□□□ 0.81
TNPO1-211ENST00000518279 RASA1P20936 1047 aa20.14■□□□□ 0.81
TNPO1-211ENST00000518279 FAAP100Q0VG06 881 aa20.14■□□□□ 0.81
TNPO1-211ENST00000518279 KBTBD3Q8NAB2 608 aa20.14■□□□□ 0.81
TNPO1-211ENST00000518279 RNPC3Q96LT9 517 aaKnown RBP20.14■□□□□ 0.81
TNPO1-211ENST00000518279 SLF1Q9BQI6 1058 aa20.14■□□□□ 0.81
TNPO1-211ENST00000518279 CNPY2Q9Y2B0 182 aa20.14■□□□□ 0.81
TNPO1-211ENST00000518279 COPB2P35606 906 aa20.13■□□□□ 0.81
TNPO1-211ENST00000518279 ACLYP53396 1101 aa20.13■□□□□ 0.81
TNPO1-211ENST00000518279 IRX5P78411 483 aaPredicted RBP20.13■□□□□ 0.81
TNPO1-211ENST00000518279 SNRNP48Q6IEG0 339 aaKnown RBP20.13■□□□□ 0.81
TNPO1-211ENST00000518279 OTUD7AQ8TE49 926 aaPredicted RBP20.13■□□□□ 0.81
TNPO1-211ENST00000518279 STRBPQ96SI9 672 aaKnown RBP20.13■□□□□ 0.81
TNPO1-211ENST00000518279 TEX13BQ9BXU2 312 aa20.13■□□□□ 0.81
TNPO1-211ENST00000518279 TMEM39AQ9NV64 488 aa20.13■□□□□ 0.81
TNPO1-211ENST00000518279 ARPP21Q9UBL0 812 aaPredicted RBP20.13■□□□□ 0.81
TNPO1-211ENST00000518279 TTC41PQ6P2S7 1318 aa20.12■□□□□ 0.81
TNPO1-211ENST00000518279 DNAJC25-GNG10A0A024R161 153 aa20.12■□□□□ 0.81
TNPO1-211ENST00000518279 MYADML2A6NDP7 307 aa20.12■□□□□ 0.81
TNPO1-211ENST00000518279 GSG1L2A8MUP6 293 aa20.12■□□□□ 0.81
TNPO1-211ENST00000518279 F5H6K3 240 aa20.12■□□□□ 0.81
TNPO1-211ENST00000518279 FPGSQ05932 587 aa20.12■□□□□ 0.81
TNPO1-211ENST00000518279 KLRC3Q07444 240 aa20.12■□□□□ 0.81
TNPO1-211ENST00000518279 CCSAPQ6IQ19 270 aaPredicted RBP20.12■□□□□ 0.81
TNPO1-211ENST00000518279 ANKRD33Q7Z3H0 272 aa20.12■□□□□ 0.81
TNPO1-211ENST00000518279 KLHDC9Q8NEP7 349 aa20.12■□□□□ 0.81
TNPO1-211ENST00000518279 PI4K2BQ8TCG2 481 aa20.12■□□□□ 0.81
TNPO1-211ENST00000518279 TSEN34Q9BSV6 310 aaKnown RBP20.12■□□□□ 0.81
TNPO1-211ENST00000518279 SYNGAP1Q96PV0 1343 aa20.11■□□□□ 0.81
TNPO1-211ENST00000518279 ADCY6O43306 1168 aa20.11■□□□□ 0.81
TNPO1-211ENST00000518279 NDUFB10O96000 172 aa20.11■□□□□ 0.81
TNPO1-211ENST00000518279 FOSL2P15408 326 aa20.11■□□□□ 0.81
TNPO1-211ENST00000518279 KCNA10Q16322 511 aa20.11■□□□□ 0.81
TNPO1-211ENST00000518279 SBK1Q52WX2 424 aa20.11■□□□□ 0.81
TNPO1-211ENST00000518279 MAMDC4Q6UXC1 1216 aa20.11■□□□□ 0.81
TNPO1-211ENST00000518279 TOX2Q96NM4 488 aa20.11■□□□□ 0.81
TNPO1-211ENST00000518279 STARD7Q9NQZ5 370 aa20.11■□□□□ 0.81
TNPO1-211ENST00000518279 NYAP2Q9P242 653 aa20.11■□□□□ 0.81
TNPO1-211ENST00000518279 ZHX1Q9UKY1 873 aaPredicted RBP20.11■□□□□ 0.81
TNPO1-211ENST00000518279 FAM184BQ9ULE4 1060 aa20.11■□□□□ 0.81
TNPO1-211ENST00000518279 SALL3Q9BXA9 1300 aa20.1■□□□□ 0.81
TNPO1-211ENST00000518279 SLC4A3P48751 1232 aa20.1■□□□□ 0.81
TNPO1-211ENST00000518279 MSL3Q8N5Y2 521 aaKnown RBP20.1■□□□□ 0.81
TNPO1-211ENST00000518279 OSBP2Q969R2 916 aa20.1■□□□□ 0.81
TNPO1-211ENST00000518279 DDX11Q96FC9 970 aa20.1■□□□□ 0.81
TNPO1-211ENST00000518279 FGD4Q96M96 766 aa20.1■□□□□ 0.81
TNPO1-211ENST00000518279 MCM3APO60318 1980 aa20.09■□□□□ 0.81
TNPO1-211ENST00000518279 IGKV6D-41A0A0C4DH26 115 aa20.09■□□□□ 0.81
TNPO1-211ENST00000518279 MOXD2PA6NHM9 499 aa20.09■□□□□ 0.81
TNPO1-211ENST00000518279 MINDY4BA8MYZ0 360 aa20.09■□□□□ 0.81
TNPO1-211ENST00000518279 RNF113AO15541 343 aaKnown RBP20.09■□□□□ 0.81
TNPO1-211ENST00000518279 HDAC1Q13547 482 aaPredicted RBP20.09■□□□□ 0.81
TNPO1-211ENST00000518279 GRIN2CQ14957 1233 aa20.09■□□□□ 0.81
TNPO1-211ENST00000518279 CPXCR1Q8N123 301 aa20.09■□□□□ 0.81
TNPO1-211ENST00000518279 PRPF38AQ8NAV1 312 aaKnown RBP20.09■□□□□ 0.81
TNPO1-211ENST00000518279 NUP133Q8WUM0 1156 aa20.09■□□□□ 0.81
TNPO1-211ENST00000518279 APPBP2Q92624 585 aa20.09■□□□□ 0.81
TNPO1-211ENST00000518279 MKNK2Q9HBH9 465 aa20.09■□□□□ 0.81
TNPO1-211ENST00000518279 RAVER2Q9HCJ3 691 aaKnown RBP20.09■□□□□ 0.81
TNPO1-211ENST00000518279 CLIP2Q9UDT6 1046 aa20.09■□□□□ 0.81
TNPO1-211ENST00000518279 CHD7Q9P2D1 2997 aa20.09■□□□□ 0.81
TNPO1-211ENST00000518279 MYH4Q9Y623 1939 aa20.08■□□□□ 0.81
TNPO1-211ENST00000518279 TMEM265A0A087WTH1 108 aa20.08■□□□□ 0.81
TNPO1-211ENST00000518279 DCDC2CA8MYV0 355 aa20.08■□□□□ 0.81
TNPO1-211ENST00000518279 ATP2A1O14983 1001 aa20.08■□□□□ 0.81
TNPO1-211ENST00000518279 DUSP11O75319 330 aaKnown RBP20.08■□□□□ 0.81
TNPO1-211ENST00000518279 ACVR2BQ13705 512 aa20.08■□□□□ 0.81
TNPO1-211ENST00000518279 EPB41L4AQ9HCS5 686 aaPredicted RBP20.08■□□□□ 0.81
TNPO1-211ENST00000518279 TBX21Q9UL17 535 aa20.08■□□□□ 0.81
TNPO1-211ENST00000518279 ERC2O15083 957 aa20.07■□□□□ 0.8
TNPO1-211ENST00000518279 PRDM1O75626 825 aa20.07■□□□□ 0.8
TNPO1-211ENST00000518279 TIMP1P01033 207 aa20.07■□□□□ 0.8
TNPO1-211ENST00000518279 ZFYP08048 801 aaPredicted RBP20.07■□□□□ 0.8
TNPO1-211ENST00000518279 MX1P20591 662 aa20.07■□□□□ 0.8
TNPO1-211ENST00000518279 DNAJB2P25686 324 aa20.07■□□□□ 0.8
TNPO1-211ENST00000518279 C16orf59Q7L2K0 433 aa20.07■□□□□ 0.8
TNPO1-211ENST00000518279 KIFC2Q96AC6 838 aa20.07■□□□□ 0.8
TNPO1-211ENST00000518279 BUD13Q9BRD0 619 aaKnown RBP eCLIP20.07■□□□□ 0.81e-6■■□□□ 13.4
TNPO1-211ENST00000518279 SLC38A10Q9HBR0 1119 aa20.07■□□□□ 0.8
TNPO1-211ENST00000518279 CDKN2AIPQ9NXV6 580 aaPredicted RBP20.07■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms