RNA–Protein interactions for RNA: ENST00000514755.5

UBE2D3-232, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 4

Gene UBE2D3, Length 593 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-232ENST00000514755 CATSPERGQ6ZRH7 1159 aa13.11□□□□□ -0.31
UBE2D3-232ENST00000514755 TICAM2Q86XR7 235 aa13.11□□□□□ -0.31
UBE2D3-232ENST00000514755 SPICE1Q8N0Z3 855 aa13.11□□□□□ -0.31
UBE2D3-232ENST00000514755 RPAP3Q9H6T3 665 aaPredicted RBP13.11□□□□□ -0.31
UBE2D3-232ENST00000514755 DIAPH3Q9NSV4 1193 aa13.11□□□□□ -0.31
UBE2D3-232ENST00000514755 DDX52Q9Y2R4 599 aaKnown RBP eCLIP13.11□□□□□ -0.311e-8■□□□□ 9.1
UBE2D3-232ENST00000514755 TMX2Q9Y320 296 aa13.11□□□□□ -0.31
UBE2D3-232ENST00000514755 PTCH2Q9Y6C5 1203 aa13.11□□□□□ -0.31
UBE2D3-232ENST00000514755 IGKV6D-41A0A0C4DH26 115 aa13.1□□□□□ -0.31
UBE2D3-232ENST00000514755 FMNL1O95466 1100 aaPredicted RBP13.1□□□□□ -0.31
UBE2D3-232ENST00000514755 HAND2P61296 217 aa13.1□□□□□ -0.31
UBE2D3-232ENST00000514755 KIF22Q14807 665 aa13.1□□□□□ -0.31
UBE2D3-232ENST00000514755 ALX1Q15699 326 aa13.1□□□□□ -0.31
UBE2D3-232ENST00000514755 FAM110CQ1W6H9 321 aa13.1□□□□□ -0.31
UBE2D3-232ENST00000514755 Q3C1V9 767 aa13.1□□□□□ -0.31
UBE2D3-232ENST00000514755 SWT1Q5T5J6 900 aaKnown RBP13.1□□□□□ -0.31
UBE2D3-232ENST00000514755 CENPQQ7L2Z9 268 aaPredicted RBP13.1□□□□□ -0.31
UBE2D3-232ENST00000514755 ZNF444Q8N0Y2 327 aaPredicted RBP13.1□□□□□ -0.31
UBE2D3-232ENST00000514755 KANSL2Q9H9L4 492 aa13.1□□□□□ -0.31
UBE2D3-232ENST00000514755 ARHGEF10LQ9HCE6 1279 aa13.1□□□□□ -0.31
UBE2D3-232ENST00000514755 RBPJLQ9UBG7 517 aa13.1□□□□□ -0.31
UBE2D3-232ENST00000514755 GABRQQ9UN88 632 aa13.1□□□□□ -0.31
UBE2D3-232ENST00000514755 RLFQ13129 1914 aa13.09□□□□□ -0.31
UBE2D3-232ENST00000514755 USP17L15C9J2P7 530 aa13.09□□□□□ -0.31
UBE2D3-232ENST00000514755 USP17L13C9JLJ4 530 aa13.09□□□□□ -0.31
UBE2D3-232ENST00000514755 USP17L11C9JVI0 530 aa13.09□□□□□ -0.31
UBE2D3-232ENST00000514755 USP17L18D6R9N7 530 aa13.09□□□□□ -0.31
UBE2D3-232ENST00000514755 USP17L22D6RA61 530 aa13.09□□□□□ -0.31
UBE2D3-232ENST00000514755 USP17L17D6RBQ6 530 aa13.09□□□□□ -0.31
UBE2D3-232ENST00000514755 USP17L19D6RCP7 530 aa13.09□□□□□ -0.31
UBE2D3-232ENST00000514755 USP17L20D6RJB6 530 aa13.09□□□□□ -0.31
UBE2D3-232ENST00000514755 CNMDO75829 334 aa13.09□□□□□ -0.31
UBE2D3-232ENST00000514755 GCLCP48506 637 aaPredicted RBP13.09□□□□□ -0.31
UBE2D3-232ENST00000514755 USP17L24Q0WX57 530 aa13.09□□□□□ -0.31
UBE2D3-232ENST00000514755 DOCK3Q8IZD9 2030 aa13.09□□□□□ -0.31
UBE2D3-232ENST00000514755 CEP95Q96GE4 821 aa13.09□□□□□ -0.31
UBE2D3-232ENST00000514755 VCPKMTQ9H867 229 aa13.09□□□□□ -0.31
UBE2D3-232ENST00000514755 ANAPC4Q9UJX5 808 aa13.09□□□□□ -0.31
UBE2D3-232ENST00000514755 HTTP42858 3142 aa13.09□□□□□ -0.31
UBE2D3-232ENST00000514755 HIP1O00291 1037 aa13.08□□□□□ -0.32
UBE2D3-232ENST00000514755 CHMLP26374 656 aa13.08□□□□□ -0.32
UBE2D3-232ENST00000514755 FCGRTP55899 365 aa13.08□□□□□ -0.32
UBE2D3-232ENST00000514755 TFAP4Q01664 338 aa13.08□□□□□ -0.32
UBE2D3-232ENST00000514755 PRKCZQ05513 592 aa13.08□□□□□ -0.32
UBE2D3-232ENST00000514755 PDE4BQ07343 736 aa13.08□□□□□ -0.32
UBE2D3-232ENST00000514755 NEDD1Q8NHV4 660 aa13.08□□□□□ -0.32
UBE2D3-232ENST00000514755 PAGR1Q9BTK6 254 aa13.08□□□□□ -0.32
UBE2D3-232ENST00000514755 MORF4L1Q9UBU8 362 aa13.08□□□□□ -0.32
UBE2D3-232ENST00000514755 SRRDQ9UH36 339 aa13.08□□□□□ -0.32
UBE2D3-232ENST00000514755 ZMYM6O95789 1325 aa13.08□□□□□ -0.32
UBE2D3-232ENST00000514755 MYPNQ86TC9 1320 aa13.08□□□□□ -0.32
UBE2D3-232ENST00000514755 PLIN4Q96Q06 1357 aa13.07□□□□□ -0.32
UBE2D3-232ENST00000514755 PARP14Q460N5 1801 aa13.07□□□□□ -0.32
UBE2D3-232ENST00000514755 RAD21O60216 631 aa13.07□□□□□ -0.32
UBE2D3-232ENST00000514755 NMT2O60551 498 aa13.07□□□□□ -0.32
UBE2D3-232ENST00000514755 SLC3A2P08195 630 aaKnown RBP13.07□□□□□ -0.32
UBE2D3-232ENST00000514755 FGRP09769 529 aa13.07□□□□□ -0.32
UBE2D3-232ENST00000514755 TSPY3P0CV98 308 aa13.07□□□□□ -0.32
UBE2D3-232ENST00000514755 TSPY8P0CW00 308 aa13.07□□□□□ -0.32
UBE2D3-232ENST00000514755 SOX10P56693 466 aa13.07□□□□□ -0.32
UBE2D3-232ENST00000514755 TBC1D10CQ8IV04 446 aa13.07□□□□□ -0.32
UBE2D3-232ENST00000514755 LRRC47Q8N1G4 583 aaKnown RBP13.07□□□□□ -0.32
UBE2D3-232ENST00000514755 SH3TC2Q8TF17 1288 aa13.07□□□□□ -0.32
UBE2D3-232ENST00000514755 PORCNQ9H237 461 aa13.07□□□□□ -0.32
UBE2D3-232ENST00000514755 ZNF287Q9HBT7 754 aa13.07□□□□□ -0.32
UBE2D3-232ENST00000514755 IL17RBQ9NRM6 502 aa13.07□□□□□ -0.32
UBE2D3-232ENST00000514755 MTMR4Q9NYA4 1195 aa13.07□□□□□ -0.32
UBE2D3-232ENST00000514755 BTBD7Q9P203 1132 aa13.07□□□□□ -0.32
UBE2D3-232ENST00000514755 NYAP2Q9P242 653 aa13.07□□□□□ -0.32
UBE2D3-232ENST00000514755 CLIP2Q9UDT6 1046 aa13.07□□□□□ -0.32
UBE2D3-232ENST00000514755 MYH4Q9Y623 1939 aa13.07□□□□□ -0.32
UBE2D3-232ENST00000514755 TNPO2O14787 897 aaKnown RBP13.06□□□□□ -0.32
UBE2D3-232ENST00000514755 GNRH1P01148 92 aa13.06□□□□□ -0.32
UBE2D3-232ENST00000514755 SSTR3P32745 418 aaPredicted RBP13.06□□□□□ -0.32
UBE2D3-232ENST00000514755 ERVK-9P63128 1117 aa13.06□□□□□ -0.32
UBE2D3-232ENST00000514755 ERVK-24P63145 666 aa13.06□□□□□ -0.32
UBE2D3-232ENST00000514755 ARHGEF6Q15052 776 aa13.06□□□□□ -0.32
UBE2D3-232ENST00000514755 RRP12Q5JTH9 1297 aaKnown RBP13.06□□□□□ -0.32
UBE2D3-232ENST00000514755 FAM83BQ5T0W9 1011 aa13.06□□□□□ -0.32
UBE2D3-232ENST00000514755 LPAR1Q92633 364 aa13.06□□□□□ -0.32
UBE2D3-232ENST00000514755 CCDC136Q96JN2 1154 aa13.06□□□□□ -0.32
UBE2D3-232ENST00000514755 NUP88Q99567 741 aaPredicted RBP13.06□□□□□ -0.32
UBE2D3-232ENST00000514755 TANGO6Q9C0B7 1094 aa13.06□□□□□ -0.32
UBE2D3-232ENST00000514755 SH2D4AQ9H788 454 aa13.06□□□□□ -0.32
UBE2D3-232ENST00000514755 FBXO28Q9NVF7 368 aa13.06□□□□□ -0.32
UBE2D3-232ENST00000514755 PLXNB2O15031 1838 aa13.06□□□□□ -0.32
UBE2D3-232ENST00000514755 CENPFP49454 3210 aa13.05□□□□□ -0.32
UBE2D3-232ENST00000514755 A0A0G2JMZ2 1700 aa13.05□□□□□ -0.32
UBE2D3-232ENST00000514755 LAMA4Q16363 1823 aa13.05□□□□□ -0.32
UBE2D3-232ENST00000514755 TSPY2A6NKD2 308 aa13.05□□□□□ -0.32
UBE2D3-232ENST00000514755 F5H6K3 240 aa13.05□□□□□ -0.32
UBE2D3-232ENST00000514755 WDR46O15213 610 aaKnown RBP13.05□□□□□ -0.32
UBE2D3-232ENST00000514755 ORC4O43929 436 aa13.05□□□□□ -0.32
UBE2D3-232ENST00000514755 RANBP6O60518 1105 aaKnown RBP13.05□□□□□ -0.32
UBE2D3-232ENST00000514755 NDUFB10O96000 172 aa13.05□□□□□ -0.32
UBE2D3-232ENST00000514755 MYCP01106 439 aaPredicted RBP13.05□□□□□ -0.32
UBE2D3-232ENST00000514755 FLT3LGP49771 235 aa13.05□□□□□ -0.32
UBE2D3-232ENST00000514755 MFAP1P55081 439 aaKnown RBP13.05□□□□□ -0.32
UBE2D3-232ENST00000514755 PTH1RQ03431 593 aa13.05□□□□□ -0.32
UBE2D3-232ENST00000514755 KLRC3Q07444 240 aa13.05□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 57.1 ms