RNA–Protein interactions for RNA: ENST00000503427.5

HMGXB3-202, Transcript of HMG-box containing 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene HMGXB3, Length 5,275 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB3-202ENST00000503427 PEX26Q7Z412 305 aa17.88■□□□□ 0.45
HMGXB3-202ENST00000503427 FANCLQ9NW38 375 aa17.88■□□□□ 0.45
HMGXB3-202ENST00000503427 PNMA2Q9UL42 364 aa17.88■□□□□ 0.45
HMGXB3-202ENST00000503427 IVNS1ABPQ9Y6Y0 642 aa17.88■□□□□ 0.45
HMGXB3-202ENST00000503427 PPEF1O14829 653 aaPredicted RBP17.88■□□□□ 0.45
HMGXB3-202ENST00000503427 MYCLP12524 364 aaPredicted RBP17.88■□□□□ 0.45
HMGXB3-202ENST00000503427 ADD2P35612 726 aa17.88■□□□□ 0.45
HMGXB3-202ENST00000503427 PPFIBP2Q8ND30 876 aa17.88■□□□□ 0.45
HMGXB3-202ENST00000503427 PSMB7Q99436 277 aa17.88■□□□□ 0.45
HMGXB3-202ENST00000503427 KLRF2D3W0D1 207 aa17.87■□□□□ 0.45
HMGXB3-202ENST00000503427 ERFEQ4G0M1 354 aa17.87■□□□□ 0.45
HMGXB3-202ENST00000503427 NSMFQ6X4W1 530 aa17.87■□□□□ 0.45
HMGXB3-202ENST00000503427 SIRT2Q8IXJ6 389 aa17.87■□□□□ 0.45
HMGXB3-202ENST00000503427 TSC1Q92574 1164 aa17.87■□□□□ 0.45
HMGXB3-202ENST00000503427 AS3MTQ9HBK9 375 aa17.87■□□□□ 0.45
HMGXB3-202ENST00000503427 BCRP11274 1271 aa17.87■□□□□ 0.45
HMGXB3-202ENST00000503427 BRDTQ58F21 947 aaPredicted RBP17.87■□□□□ 0.45
HMGXB3-202ENST00000503427 SPATA1Q5VX52 437 aa17.87■□□□□ 0.45
HMGXB3-202ENST00000503427 KIAA0825Q8IV33 1275 aa17.87■□□□□ 0.45
HMGXB3-202ENST00000503427 CCDC17Q96LX7 622 aa17.87■□□□□ 0.45
HMGXB3-202ENST00000503427 TRIM31Q9BZY9 425 aa17.87■□□□□ 0.45
HMGXB3-202ENST00000503427 KDM3AQ9Y4C1 1321 aa17.87■□□□□ 0.45
HMGXB3-202ENST00000503427 CD2BP2O95400 341 aaKnown RBP17.87■□□□□ 0.45
HMGXB3-202ENST00000503427 NELFCDQ8IXH7 590 aa17.87■□□□□ 0.45
HMGXB3-202ENST00000503427 HAUS4Q9H6D7 363 aa17.87■□□□□ 0.45
HMGXB3-202ENST00000503427 SEC31BQ9NQW1 1179 aa17.87■□□□□ 0.45
HMGXB3-202ENST00000503427 SDAD1Q9NVU7 687 aaKnown RBP eCLIP17.87■□□□□ 0.45
HMGXB3-202ENST00000503427 ABCA6Q8N139 1617 aa17.87■□□□□ 0.45
HMGXB3-202ENST00000503427 PALLDQ8WX93 1383 aa17.87■□□□□ 0.45
HMGXB3-202ENST00000503427 CYP21A2P08686 494 aa17.87■□□□□ 0.45
HMGXB3-202ENST00000503427 CERKLQ49MI3 558 aaPredicted RBP17.87■□□□□ 0.45
HMGXB3-202ENST00000503427 DCAF15Q66K64 600 aa17.87■□□□□ 0.45
HMGXB3-202ENST00000503427 KRT27Q7Z3Y8 459 aa17.87■□□□□ 0.45
HMGXB3-202ENST00000503427 AGTPBP1Q9UPW5 1226 aa17.87■□□□□ 0.45
HMGXB3-202ENST00000503427 E9PCH4 1651 aa17.87■□□□□ 0.45
HMGXB3-202ENST00000503427 DOK7Q18PE1 504 aa17.86■□□□□ 0.45
HMGXB3-202ENST00000503427 KCNG1Q9UIX4 513 aa17.86■□□□□ 0.45
HMGXB3-202ENST00000503427 TNS3Q68CZ2 1445 aa17.86■□□□□ 0.45
HMGXB3-202ENST00000503427 EXOC3O60645 756 aa17.86■□□□□ 0.45
HMGXB3-202ENST00000503427 CABS1Q96KC9 395 aa17.86■□□□□ 0.45
HMGXB3-202ENST00000503427 DESI2Q9BSY9 194 aa17.86■□□□□ 0.45
HMGXB3-202ENST00000503427 TBC1D7Q9P0N9 293 aa17.86■□□□□ 0.45
HMGXB3-202ENST00000503427 PNPLA6Q8IY17 1366 aa17.86■□□□□ 0.45
HMGXB3-202ENST00000503427 GTPBP6O43824 516 aaPredicted RBP17.86■□□□□ 0.45
HMGXB3-202ENST00000503427 CHAMP1Q96JM3 812 aa17.86■□□□□ 0.45
HMGXB3-202ENST00000503427 FYB2Q5VWT5 728 aa17.86■□□□□ 0.45
HMGXB3-202ENST00000503427 MYCT1Q8N699 235 aa17.86■□□□□ 0.45
HMGXB3-202ENST00000503427 QRICH2Q9H0J4 1663 aa17.86■□□□□ 0.45
HMGXB3-202ENST00000503427 BTBD18B2RXH4 712 aa17.85■□□□□ 0.45
HMGXB3-202ENST00000503427 STRN3Q13033 797 aa17.85■□□□□ 0.45
HMGXB3-202ENST00000503427 ZNF354CQ86Y25 554 aa17.85■□□□□ 0.45
HMGXB3-202ENST00000503427 TRIM37O94972 964 aa17.85■□□□□ 0.45
HMGXB3-202ENST00000503427 ATP11AP98196 1134 aa17.85■□□□□ 0.45
HMGXB3-202ENST00000503427 PPIL4Q8WUA2 492 aaKnown RBP eCLIP17.85■□□□□ 0.45
HMGXB3-202ENST00000503427 MRPL44Q9H9J2 332 aaKnown RBP17.85■□□□□ 0.45
HMGXB3-202ENST00000503427 NLRC4Q9NPP4 1024 aa17.85■□□□□ 0.45
HMGXB3-202ENST00000503427 ASIC3Q9UHC3 531 aa17.85■□□□□ 0.45
HMGXB3-202ENST00000503427 CLIC4Q9Y696 253 aa17.85■□□□□ 0.45
HMGXB3-202ENST00000503427 BCORL1Q5H9F3 1711 aa17.85■□□□□ 0.45
HMGXB3-202ENST00000503427 GCNT3O95395 438 aa17.85■□□□□ 0.45
HMGXB3-202ENST00000503427 SCNN1DP51172 638 aa17.85■□□□□ 0.45
HMGXB3-202ENST00000503427 PLCB1Q9NQ66 1216 aa17.85■□□□□ 0.45
HMGXB3-202ENST00000503427 NOP56O00567 594 aaKnown RBP17.85■□□□□ 0.45
HMGXB3-202ENST00000503427 PSTPIP2Q9H939 334 aa17.85■□□□□ 0.45
HMGXB3-202ENST00000503427 BIN2Q9UBW5 565 aaPredicted RBP17.85■□□□□ 0.45
HMGXB3-202ENST00000503427 PYCARDQ9ULZ3 195 aa17.85■□□□□ 0.45
HMGXB3-202ENST00000503427 CEP152O94986 1710 aa17.85■□□□□ 0.45
HMGXB3-202ENST00000503427 SLC39A14Q15043 492 aa17.85■□□□□ 0.45
HMGXB3-202ENST00000503427 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP17.84■□□□□ 0.45
HMGXB3-202ENST00000503427 CFAP157Q5JU67 520 aa17.84■□□□□ 0.45
HMGXB3-202ENST00000503427 STMN2Q93045 179 aa17.84■□□□□ 0.45
HMGXB3-202ENST00000503427 DDX41Q9UJV9 622 aaKnown RBP17.84■□□□□ 0.45
HMGXB3-202ENST00000503427 HYOU1Q9Y4L1 999 aa17.84■□□□□ 0.45
HMGXB3-202ENST00000503427 SASH1O94885 1247 aa17.84■□□□□ 0.45
HMGXB3-202ENST00000503427 ICA1Q05084 483 aa17.84■□□□□ 0.45
HMGXB3-202ENST00000503427 MYOCDQ8IZQ8 938 aa17.84■□□□□ 0.45
HMGXB3-202ENST00000503427 TTLL11Q8NHH1 800 aa17.84■□□□□ 0.45
HMGXB3-202ENST00000503427 KIFC2Q96AC6 838 aa17.84■□□□□ 0.45
HMGXB3-202ENST00000503427 RAB17Q9H0T7 212 aa17.84■□□□□ 0.45
HMGXB3-202ENST00000503427 PPP6R2O75170 966 aa17.84■□□□□ 0.45
HMGXB3-202ENST00000503427 CCDC110Q8TBZ0 833 aa17.84■□□□□ 0.45
HMGXB3-202ENST00000503427 PSMD1Q99460 953 aa17.84■□□□□ 0.45
HMGXB3-202ENST00000503427 BCS1LQ9Y276 419 aa17.84■□□□□ 0.45
HMGXB3-202ENST00000503427 PPFIA4O75335 1185 aa17.84■□□□□ 0.45
HMGXB3-202ENST00000503427 ERCC3P19447 782 aa17.84■□□□□ 0.45
HMGXB3-202ENST00000503427 MAP7D1Q3KQU3 841 aa17.84■□□□□ 0.45
HMGXB3-202ENST00000503427 ZNF589Q86UQ0 364 aaPredicted RBP17.84■□□□□ 0.45
HMGXB3-202ENST00000503427 AXIN2Q9Y2T1 843 aa17.84■□□□□ 0.45
HMGXB3-202ENST00000503427 MRPL11Q9Y3B7 192 aaKnown RBP17.84■□□□□ 0.45
HMGXB3-202ENST00000503427 ZNF827Q17R98 1081 aa17.83■□□□□ 0.45
HMGXB3-202ENST00000503427 NEK8Q86SG6 692 aa17.83■□□□□ 0.45
HMGXB3-202ENST00000503427 CLIC6Q96NY7 704 aa17.83■□□□□ 0.45
HMGXB3-202ENST00000503427 RNF26Q9BY78 433 aaPredicted RBP17.83■□□□□ 0.45
HMGXB3-202ENST00000503427 POLR3EQ9NVU0 708 aa17.83■□□□□ 0.45
HMGXB3-202ENST00000503427 A0A1B0GUA9 196 aa17.83■□□□□ 0.44
HMGXB3-202ENST00000503427 IRX3P78415 501 aaPredicted RBP17.83■□□□□ 0.44
HMGXB3-202ENST00000503427 UAP1Q16222 522 aaPredicted RBP17.83■□□□□ 0.44
HMGXB3-202ENST00000503427 ZSCAN26Q16670 478 aa17.83■□□□□ 0.44
HMGXB3-202ENST00000503427 APOA5Q6Q788 366 aa17.83■□□□□ 0.44
HMGXB3-202ENST00000503427 CMTR1Q8N1G2 835 aaKnown RBP17.83■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms