RNA–Protein interactions for RNA: ENST00000498236.1

CDC42-205, Transcript of cell division cycle 42, humanhuman

TSL 5

Gene CDC42, Length 816 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42-205ENST00000498236 MMP14P50281 582 aa8.95□□□□□ -0.98
CDC42-205ENST00000498236 PKP1Q13835 747 aa8.95□□□□□ -0.98
CDC42-205ENST00000498236 ELOAQ14241 798 aaKnown RBP8.95□□□□□ -0.98
CDC42-205ENST00000498236 PPP2R5BQ15173 497 aa8.95□□□□□ -0.98
CDC42-205ENST00000498236 EML3Q32P44 896 aa8.95□□□□□ -0.98
CDC42-205ENST00000498236 TMEM67Q5HYA8 995 aa8.95□□□□□ -0.98
CDC42-205ENST00000498236 APOA5Q6Q788 366 aa8.95□□□□□ -0.98
CDC42-205ENST00000498236 LARGE2Q8N3Y3 721 aa8.95□□□□□ -0.98
CDC42-205ENST00000498236 GMLQ99445 158 aa8.95□□□□□ -0.98
CDC42-205ENST00000498236 ZNF287Q9HBT7 754 aa8.95□□□□□ -0.98
CDC42-205ENST00000498236 INCENPQ9NQS7 918 aa8.95□□□□□ -0.98
CDC42-205ENST00000498236 ZNRF3Q9ULT6 936 aa8.95□□□□□ -0.98
CDC42-205ENST00000498236 DOLKQ9UPQ8 538 aa8.95□□□□□ -0.98
CDC42-205ENST00000498236 KIF3AQ9Y496 699 aa8.95□□□□□ -0.98
CDC42-205ENST00000498236 FER1L6Q2WGJ9 1857 aa8.95□□□□□ -0.98
CDC42-205ENST00000498236 BAZ2AQ9UIF9 1905 aaKnown RBP8.95□□□□□ -0.98
CDC42-205ENST00000498236 NAV1Q8NEY1 1877 aa8.94□□□□□ -0.98
CDC42-205ENST00000498236 CDK5RAP2Q96SN8 1893 aa8.94□□□□□ -0.98
CDC42-205ENST00000498236 CYP2D7A0A087X1C5 515 aa8.94□□□□□ -0.98
CDC42-205ENST00000498236 ERICH2A1L162 156 aa8.94□□□□□ -0.98
CDC42-205ENST00000498236 FAM196BA6NMK8 535 aa8.94□□□□□ -0.98
CDC42-205ENST00000498236 GOLGA8BA8MQT2 603 aa8.94□□□□□ -0.98
CDC42-205ENST00000498236 ST8SIA5O15466 376 aa8.94□□□□□ -0.98
CDC42-205ENST00000498236 WDHD1O75717 1129 aaPredicted RBP8.94□□□□□ -0.98
CDC42-205ENST00000498236 CTDNEP1O95476 244 aa8.94□□□□□ -0.98
CDC42-205ENST00000498236 ZSCAN22P10073 491 aaPredicted RBP8.94□□□□□ -0.98
CDC42-205ENST00000498236 CYP2D6P10635 497 aa8.94□□□□□ -0.98
CDC42-205ENST00000498236 IARSP41252 1262 aaKnown RBP8.94□□□□□ -0.98
CDC42-205ENST00000498236 FOXC1Q12948 553 aa8.94□□□□□ -0.98
CDC42-205ENST00000498236 STK3Q13188 491 aa8.94□□□□□ -0.98
CDC42-205ENST00000498236 SEC23AQ15436 765 aa8.94□□□□□ -0.98
CDC42-205ENST00000498236 CCDC178Q5BJE1 867 aa8.94□□□□□ -0.98
CDC42-205ENST00000498236 C16orf86Q6ZW13 317 aa8.94□□□□□ -0.98
CDC42-205ENST00000498236 IQCA1Q86XH1 822 aa8.94□□□□□ -0.98
CDC42-205ENST00000498236 NSUN7Q8NE18 718 aaKnown RBP8.94□□□□□ -0.98
CDC42-205ENST00000498236 ANKS1AQ92625 1134 aa8.94□□□□□ -0.98
CDC42-205ENST00000498236 ZSCAN10Q96SZ4 725 aaPredicted RBP8.94□□□□□ -0.98
CDC42-205ENST00000498236 UBAC1Q9BSL1 405 aa8.94□□□□□ -0.98
CDC42-205ENST00000498236 MXD3Q9BW11 206 aa8.94□□□□□ -0.98
CDC42-205ENST00000498236 IDI2Q9BXS1 227 aa8.94□□□□□ -0.98
CDC42-205ENST00000498236 TAOK3Q9H2K8 898 aa8.94□□□□□ -0.98
CDC42-205ENST00000498236 ZNF277Q9NRM2 450 aaPredicted RBP8.94□□□□□ -0.98
CDC42-205ENST00000498236 TCP11L1Q9NUJ3 509 aa8.94□□□□□ -0.98
CDC42-205ENST00000498236 COL4A5P29400 1685 aa8.94□□□□□ -0.98
CDC42-205ENST00000498236 PTPDC1A2A3K4 754 aa8.93□□□□□ -0.98
CDC42-205ENST00000498236 CCDC69A6NI79 296 aa8.93□□□□□ -0.98
CDC42-205ENST00000498236 ESPNB1AK53 854 aa8.93□□□□□ -0.98
CDC42-205ENST00000498236 F8W031 263 aaPredicted RBP8.93□□□□□ -0.98
CDC42-205ENST00000498236 SMIM22K7EJ46 135 aa8.93□□□□□ -0.98
CDC42-205ENST00000498236 ZBTB43O43298 467 aa8.93□□□□□ -0.98
CDC42-205ENST00000498236 CDKL5O76039 1030 aa8.93□□□□□ -0.98
CDC42-205ENST00000498236 BAG4O95429 457 aaKnown RBP8.93□□□□□ -0.98
CDC42-205ENST00000498236 POLR3DP05423 398 aaPredicted RBP8.93□□□□□ -0.98
CDC42-205ENST00000498236 RASA1P20936 1047 aa8.93□□□□□ -0.98
CDC42-205ENST00000498236 METAP2P50579 478 aaKnown RBP eCLIP8.93□□□□□ -0.98
CDC42-205ENST00000498236 SKOR1P84550 965 aa8.93□□□□□ -0.98
CDC42-205ENST00000498236 WTAPQ15007 396 aa8.93□□□□□ -0.98
CDC42-205ENST00000498236 RRP12Q5JTH9 1297 aaKnown RBP8.93□□□□□ -0.98
CDC42-205ENST00000498236 LARP1BQ659C4 914 aaKnown RBP8.93□□□□□ -0.98
CDC42-205ENST00000498236 CDC42EP5Q6NZY7 148 aa8.93□□□□□ -0.98
CDC42-205ENST00000498236 SYNE3Q6ZMZ3 975 aa8.93□□□□□ -0.98
CDC42-205ENST00000498236 TTC6Q86TZ1 520 aa8.93□□□□□ -0.98
CDC42-205ENST00000498236 KIAA0825Q8IV33 1275 aa8.93□□□□□ -0.98
CDC42-205ENST00000498236 MAPKAPK5Q8IW41 473 aa8.93□□□□□ -0.98
CDC42-205ENST00000498236 NIM1KQ8IY84 436 aa8.93□□□□□ -0.98
CDC42-205ENST00000498236 ENAHQ8N8S7 591 aaPredicted RBP8.93□□□□□ -0.98
CDC42-205ENST00000498236 AGBL3Q8NEM8 1001 aa8.93□□□□□ -0.98
CDC42-205ENST00000498236 SPON1Q9HCB6 807 aa8.93□□□□□ -0.98
CDC42-205ENST00000498236 TOMM22Q9NS69 142 aa8.93□□□□□ -0.98
CDC42-205ENST00000498236 USP40Q9NVE5 1235 aa8.93□□□□□ -0.98
CDC42-205ENST00000498236 PKD2L1Q9P0L9 805 aa8.93□□□□□ -0.98
CDC42-205ENST00000498236 MTMR6Q9Y217 621 aa8.93□□□□□ -0.98
CDC42-205ENST00000498236 NOD1Q9Y239 953 aa8.93□□□□□ -0.98
CDC42-205ENST00000498236 ATP6V1DQ9Y5K8 247 aa8.93□□□□□ -0.98
CDC42-205ENST00000498236 SLC12A7Q9Y666 1083 aa8.93□□□□□ -0.98
CDC42-205ENST00000498236 COL2A1P02458 1487 aaPredicted RBP8.93□□□□□ -0.98
CDC42-205ENST00000498236 ARFGEF1Q9Y6D6 1849 aa8.92□□□□□ -0.98
CDC42-205ENST00000498236 TNKSO95271 1327 aa8.92□□□□□ -0.98
CDC42-205ENST00000498236 CCDC196A0A1B0GTZ2 297 aa8.92□□□□□ -0.98
CDC42-205ENST00000498236 TMEM88BA6NKF7 163 aa8.92□□□□□ -0.98
CDC42-205ENST00000498236 USP17L15C9J2P7 530 aa8.92□□□□□ -0.98
CDC42-205ENST00000498236 USP17L10C9JJH3 530 aa8.92□□□□□ -0.98
CDC42-205ENST00000498236 USP17L13C9JLJ4 530 aa8.92□□□□□ -0.98
CDC42-205ENST00000498236 USP17L11C9JVI0 530 aa8.92□□□□□ -0.98
CDC42-205ENST00000498236 USP17L18D6R9N7 530 aa8.92□□□□□ -0.98
CDC42-205ENST00000498236 USP17L22D6RA61 530 aa8.92□□□□□ -0.98
CDC42-205ENST00000498236 USP17L17D6RBQ6 530 aa8.92□□□□□ -0.98
CDC42-205ENST00000498236 USP17L19D6RCP7 530 aa8.92□□□□□ -0.98
CDC42-205ENST00000498236 USP17L20D6RJB6 530 aa8.92□□□□□ -0.98
CDC42-205ENST00000498236 GOLGA6L22H0YM25 854 aa8.92□□□□□ -0.98
CDC42-205ENST00000498236 NFKBIEO00221 500 aa8.92□□□□□ -0.98
CDC42-205ENST00000498236 PSMD14O00487 310 aa8.92□□□□□ -0.98
CDC42-205ENST00000498236 RANBP6O60518 1105 aaKnown RBP8.92□□□□□ -0.98
CDC42-205ENST00000498236 JAK2O60674 1132 aa8.92□□□□□ -0.98
CDC42-205ENST00000498236 CALM1P0DP23 149 aa8.92□□□□□ -0.98
CDC42-205ENST00000498236 CALM2P0DP24 149 aa8.92□□□□□ -0.98
CDC42-205ENST00000498236 CALM3P0DP25 149 aa8.92□□□□□ -0.98
CDC42-205ENST00000498236 SCNN1DP51172 638 aa8.92□□□□□ -0.98
CDC42-205ENST00000498236 PLCD1P51178 756 aa8.92□□□□□ -0.98
CDC42-205ENST00000498236 CCT2P78371 535 aaKnown RBP8.92□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 62.5 ms