RNA–Protein interactions for RNA: ENST00000497179.1

USP11-212, Transcript of ubiquitin specific peptidase 11, humanhuman

TSL 5

Gene USP11, Length 900 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP11-212ENST00000497179 GPCPD1Q9NPB8 672 aa16.87■□□□□ 0.29
USP11-212ENST00000497179 RBPJLQ9UBG7 517 aa16.87■□□□□ 0.29
USP11-212ENST00000497179 MAD2L2Q9UI95 211 aa16.87■□□□□ 0.29
USP11-212ENST00000497179 BRPF3Q9ULD4 1205 aa16.87■□□□□ 0.29
USP11-212ENST00000497179 RABGAP1Q9Y3P9 1069 aa16.87■□□□□ 0.29
USP11-212ENST00000497179 KLF18A0A0U1RQI7 1052 aa16.86■□□□□ 0.29
USP11-212ENST00000497179 PALM3A6NDB9 673 aaPredicted RBP16.86■□□□□ 0.29
USP11-212ENST00000497179 VWA5AO00534 786 aa16.86■□□□□ 0.29
USP11-212ENST00000497179 CNMDO75829 334 aa16.86■□□□□ 0.29
USP11-212ENST00000497179 FDX1P10109 184 aa16.86■□□□□ 0.29
USP11-212ENST00000497179 APOBRQ0VD83 1088 aa16.86■□□□□ 0.29
USP11-212ENST00000497179 IKQ13123 557 aaPredicted RBP16.86■□□□□ 0.29
USP11-212ENST00000497179 SYDE2Q5VT97 1194 aa16.86■□□□□ 0.29
USP11-212ENST00000497179 SYNE3Q6ZMZ3 975 aa16.86■□□□□ 0.29
USP11-212ENST00000497179 REPS2Q8NFH8 660 aa16.86■□□□□ 0.29
USP11-212ENST00000497179 NUP133Q8WUM0 1156 aa16.86■□□□□ 0.29
USP11-212ENST00000497179 KIFC2Q96AC6 838 aa16.86■□□□□ 0.29
USP11-212ENST00000497179 TXNRD2Q9NNW7 524 aa16.86■□□□□ 0.29
USP11-212ENST00000497179 PRR12Q9ULL5 1215 aa16.86■□□□□ 0.29
USP11-212ENST00000497179 NID2Q14112 1375 aa16.86■□□□□ 0.29
USP11-212ENST00000497179 ZBTB43O43298 467 aa16.85■□□□□ 0.29
USP11-212ENST00000497179 SLC16A2P36021 539 aa16.85■□□□□ 0.29
USP11-212ENST00000497179 CTCFP49711 727 aaPredicted RBP16.85■□□□□ 0.29
USP11-212ENST00000497179 NEK4P51957 841 aa16.85■□□□□ 0.29
USP11-212ENST00000497179 SAMD1Q6SPF0 538 aaPredicted RBP16.85■□□□□ 0.29
USP11-212ENST00000497179 MICU3Q86XE3 530 aa16.85■□□□□ 0.29
USP11-212ENST00000497179 STAG2Q8N3U4 1231 aa16.85■□□□□ 0.29
USP11-212ENST00000497179 ANKRD13CQ8N6S4 541 aa16.85■□□□□ 0.29
USP11-212ENST00000497179 CTCFLQ8NI51 663 aaPredicted RBP16.85■□□□□ 0.29
USP11-212ENST00000497179 PAGR1Q9BTK6 254 aa16.85■□□□□ 0.29
USP11-212ENST00000497179 SLC38A10Q9HBR0 1119 aa16.85■□□□□ 0.29
USP11-212ENST00000497179 BTBD7Q9P203 1132 aa16.85■□□□□ 0.29
USP11-212ENST00000497179 GOLGA8BA8MQT2 603 aa16.84■□□□□ 0.29
USP11-212ENST00000497179 KLRF2D3W0D1 207 aa16.84■□□□□ 0.29
USP11-212ENST00000497179 RXRAP19793 462 aa16.84■□□□□ 0.29
USP11-212ENST00000497179 KIF5BP33176 963 aa16.84■□□□□ 0.29
USP11-212ENST00000497179 ERVK-9P63128 1117 aa16.84■□□□□ 0.29
USP11-212ENST00000497179 ERVK-24P63145 666 aa16.84■□□□□ 0.29
USP11-212ENST00000497179 RABEP1Q15276 862 aa16.84■□□□□ 0.29
USP11-212ENST00000497179 RAB11FIP4Q86YS3 637 aa16.84■□□□□ 0.29
USP11-212ENST00000497179 GPRC5AQ8NFJ5 357 aa16.84■□□□□ 0.29
USP11-212ENST00000497179 CPVLQ9H3G5 476 aa16.84■□□□□ 0.29
USP11-212ENST00000497179 COL11A1P12107 1806 aaPredicted RBP16.84■□□□□ 0.29
USP11-212ENST00000497179 GOLGA8AA7E2F4 631 aa16.83■□□□□ 0.28
USP11-212ENST00000497179 PEX10O60683 326 aa16.83■□□□□ 0.28
USP11-212ENST00000497179 FKTNO75072 461 aa16.83■□□□□ 0.28
USP11-212ENST00000497179 ZBED4O75132 1171 aa16.83■□□□□ 0.28
USP11-212ENST00000497179 OAZ1P54368 228 aa16.83■□□□□ 0.28
USP11-212ENST00000497179 AK2P54819 239 aa16.83■□□□□ 0.28
USP11-212ENST00000497179 SP3Q02447 781 aa16.83■□□□□ 0.28
USP11-212ENST00000497179 TMEM132BQ14DG7 1078 aa16.83■□□□□ 0.28
USP11-212ENST00000497179 ANKRD1Q15327 319 aa16.83■□□□□ 0.28
USP11-212ENST00000497179 FANCBQ8NB91 859 aa16.83■□□□□ 0.28
USP11-212ENST00000497179 ZNF296Q8WUU4 475 aaPredicted RBP16.83■□□□□ 0.28
USP11-212ENST00000497179 UBA5Q9GZZ9 404 aa16.83■□□□□ 0.28
USP11-212ENST00000497179 RANBP17Q9H2T7 1088 aaKnown RBP16.83■□□□□ 0.28
USP11-212ENST00000497179 ZNF214Q9UL59 606 aaPredicted RBP16.83■□□□□ 0.28
USP11-212ENST00000497179 HPS5Q9UPZ3 1129 aa16.83■□□□□ 0.28
USP11-212ENST00000497179 ATP2A1O14983 1001 aa16.82■□□□□ 0.28
USP11-212ENST00000497179 GNAQP50148 359 aa16.82■□□□□ 0.28
USP11-212ENST00000497179 LACTBP83111 547 aaPredicted RBP16.82■□□□□ 0.28
USP11-212ENST00000497179 RTN1Q16799 776 aa16.82■□□□□ 0.28
USP11-212ENST00000497179 SLC35G1Q2M3R5 365 aa16.82■□□□□ 0.28
USP11-212ENST00000497179 TMTC3Q6ZXV5 915 aa16.82■□□□□ 0.28
USP11-212ENST00000497179 CCDC144CPQ8IYA2 1237 aa16.82■□□□□ 0.28
USP11-212ENST00000497179 IL27Q8NEV9 243 aa16.82■□□□□ 0.28
USP11-212ENST00000497179 ZNF274Q96GC6 653 aaPredicted RBP16.82■□□□□ 0.28
USP11-212ENST00000497179 LZTS2Q9BRK4 669 aa16.82■□□□□ 0.28
USP11-212ENST00000497179 SPATC1LQ9H0A9 340 aa16.82■□□□□ 0.28
USP11-212ENST00000497179 RBM28Q9NW13 759 aaKnown RBP16.82■□□□□ 0.28
USP11-212ENST00000497179 PLEKHA8P1O95397 391 aa16.81■□□□□ 0.28
USP11-212ENST00000497179 SMARCA1P28370 1054 aa16.81■□□□□ 0.28
USP11-212ENST00000497179 PDIA3P30101 505 aaKnown RBP16.81■□□□□ 0.28
USP11-212ENST00000497179 METAP2P50579 478 aaKnown RBP eCLIP16.81■□□□□ 0.28
USP11-212ENST00000497179 CCNA1P78396 465 aa16.81■□□□□ 0.28
USP11-212ENST00000497179 PPP2R5BQ15173 497 aa16.81■□□□□ 0.28
USP11-212ENST00000497179 Q3C1V9 767 aa16.81■□□□□ 0.28
USP11-212ENST00000497179 ADGRF4Q8IZF3 695 aa16.81■□□□□ 0.28
USP11-212ENST00000497179 SHCBP1Q8NEM2 672 aa16.81■□□□□ 0.28
USP11-212ENST00000497179 MTMR8Q96EF0 704 aa16.81■□□□□ 0.28
USP11-212ENST00000497179 ERO1AQ96HE7 468 aa16.81■□□□□ 0.28
USP11-212ENST00000497179 SPZ1Q9BXG8 430 aa16.81■□□□□ 0.28
USP11-212ENST00000497179 TEX13BQ9BXU2 312 aa16.81■□□□□ 0.28
USP11-212ENST00000497179 RIOX1Q9H6W3 641 aa16.81■□□□□ 0.28
USP11-212ENST00000497179 JMJD4Q9H9V9 463 aa16.81■□□□□ 0.28
USP11-212ENST00000497179 NAP1L2Q9ULW6 460 aaPredicted RBP16.81■□□□□ 0.28
USP11-212ENST00000497179 CTDP1Q9Y5B0 961 aaPredicted RBP16.81■□□□□ 0.28
USP11-212ENST00000497179 ZNF536O15090 1300 aa16.8■□□□□ 0.28
USP11-212ENST00000497179 CYTH3O43739 400 aa16.8■□□□□ 0.28
USP11-212ENST00000497179 LBX1P52954 281 aa16.8■□□□□ 0.28
USP11-212ENST00000497179 SNAP25P60880 206 aa16.8■□□□□ 0.28
USP11-212ENST00000497179 NBPF11Q86T75 865 aa16.8■□□□□ 0.28
USP11-212ENST00000497179 RIOX2Q8IUF8 465 aa16.8■□□□□ 0.28
USP11-212ENST00000497179 MOV10L1Q9BXT6 1211 aaKnown RBP16.8■□□□□ 0.28
USP11-212ENST00000497179 FAM217BQ9NTX9 383 aaPredicted RBP16.8■□□□□ 0.28
USP11-212ENST00000497179 TPCN1Q9ULQ1 816 aa16.8■□□□□ 0.28
USP11-212ENST00000497179 ZSWIM8A7E2V4 1837 aa16.8■□□□□ 0.28
USP11-212ENST00000497179 DHX16O60231 1041 aaKnown RBP16.79■□□□□ 0.28
USP11-212ENST00000497179 SLC25A27O95847 323 aa16.79■□□□□ 0.28
USP11-212ENST00000497179 ICAM1P05362 532 aa16.79■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms