RNA–Protein interactions for RNA: ENST00000493829.5

USP39-218, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 2

Gene USP39, Length 1,660 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-218ENST00000493829 FLOT1O75955 427 aa22.46■■□□□ 1.19
USP39-218ENST00000493829 FDPSP14324 419 aaKnown RBP22.46■■□□□ 1.19
USP39-218ENST00000493829 AKAP17AQ02040 695 aaKnown RBP22.46■■□□□ 1.19
USP39-218ENST00000493829 SYDE2Q5VT97 1194 aa22.46■■□□□ 1.19
USP39-218ENST00000493829 FAM184AQ8NB25 1140 aa22.46■■□□□ 1.19
USP39-218ENST00000493829 AIFM3Q96NN9 605 aa22.46■■□□□ 1.19
USP39-218ENST00000493829 BAZ2BQ9UIF8 2168 aaKnown RBP22.46■■□□□ 1.19
USP39-218ENST00000493829 PIGSQ96S52 555 aa22.46■■□□□ 1.19
USP39-218ENST00000493829 SPZ1Q9BXG8 430 aa22.46■■□□□ 1.19
USP39-218ENST00000493829 FEM1BQ9UK73 627 aa22.46■■□□□ 1.19
USP39-218ENST00000493829 PARP14Q460N5 1801 aa22.45■■□□□ 1.18
USP39-218ENST00000493829 CCL15-CCL14A0A0B4J2E2 113 aa22.45■■□□□ 1.18
USP39-218ENST00000493829 ZBTB48P10074 688 aaPredicted RBP22.45■■□□□ 1.18
USP39-218ENST00000493829 APLP1P51693 650 aa22.45■■□□□ 1.18
USP39-218ENST00000493829 MOGSQ13724 837 aa22.45■■□□□ 1.18
USP39-218ENST00000493829 CCL15Q16663 113 aa22.45■■□□□ 1.18
USP39-218ENST00000493829 PROCA1Q8NCQ7 364 aaPredicted RBP22.45■■□□□ 1.18
USP39-218ENST00000493829 RNF26Q9BY78 433 aaPredicted RBP22.45■■□□□ 1.18
USP39-218ENST00000493829 JMJD4Q9H9V9 463 aa22.45■■□□□ 1.18
USP39-218ENST00000493829 PRR12Q9ULL5 1215 aa22.45■■□□□ 1.18
USP39-218ENST00000493829 STK36Q9NRP7 1315 aa22.44■■□□□ 1.18
USP39-218ENST00000493829 SLC10A3P09131 477 aa22.44■■□□□ 1.18
USP39-218ENST00000493829 GTF2A2P52657 109 aa22.44■■□□□ 1.18
USP39-218ENST00000493829 HMGN5P82970 282 aaKnown RBP22.44■■□□□ 1.18
USP39-218ENST00000493829 RRP36Q96EU6 259 aaKnown RBP22.44■■□□□ 1.18
USP39-218ENST00000493829 SLF1Q9BQI6 1058 aa22.44■■□□□ 1.18
USP39-218ENST00000493829 CDC37Q16543 378 aaPredicted RBP22.43■■□□□ 1.18
USP39-218ENST00000493829 CYP4F22Q6NT55 531 aa22.43■■□□□ 1.18
USP39-218ENST00000493829 FAM160B2Q86V87 743 aa22.43■■□□□ 1.18
USP39-218ENST00000493829 CHURC1Q8WUH1 139 aa22.43■■□□□ 1.18
USP39-218ENST00000493829 GPKOWQ92917 476 aaPredicted RBP eCLIP22.43■■□□□ 1.18
USP39-218ENST00000493829 MS4A4AQ96JQ5 239 aa22.43■■□□□ 1.18
USP39-218ENST00000493829 RIOX1Q9H6W3 641 aa22.43■■□□□ 1.18
USP39-218ENST00000493829 SEC63Q9UGP8 760 aaKnown RBP22.43■■□□□ 1.18
USP39-218ENST00000493829 AGTPBP1Q9UPW5 1226 aa22.43■■□□□ 1.18
USP39-218ENST00000493829 USP17L15C9J2P7 530 aa22.42■■□□□ 1.18
USP39-218ENST00000493829 USP17L13C9JLJ4 530 aa22.42■■□□□ 1.18
USP39-218ENST00000493829 USP17L11C9JVI0 530 aa22.42■■□□□ 1.18
USP39-218ENST00000493829 USP17L18D6R9N7 530 aa22.42■■□□□ 1.18
USP39-218ENST00000493829 USP17L22D6RA61 530 aa22.42■■□□□ 1.18
USP39-218ENST00000493829 USP17L17D6RBQ6 530 aa22.42■■□□□ 1.18
USP39-218ENST00000493829 USP17L19D6RCP7 530 aa22.42■■□□□ 1.18
USP39-218ENST00000493829 USP17L20D6RJB6 530 aa22.42■■□□□ 1.18
USP39-218ENST00000493829 PRPF3O43395 683 aaKnown RBP22.42■■□□□ 1.18
USP39-218ENST00000493829 CETPP11597 493 aa22.42■■□□□ 1.18
USP39-218ENST00000493829 TAL1P17542 331 aaPredicted RBP22.42■■□□□ 1.18
USP39-218ENST00000493829 USP17L24Q0WX57 530 aa22.42■■□□□ 1.18
USP39-218ENST00000493829 BTNL9Q6UXG8 535 aa22.42■■□□□ 1.18
USP39-218ENST00000493829 FASTKD5Q7L8L6 764 aaKnown RBP22.42■■□□□ 1.18
USP39-218ENST00000493829 BRI3BPQ8WY22 251 aa22.42■■□□□ 1.18
USP39-218ENST00000493829 ALG1Q9BT22 464 aa22.42■■□□□ 1.18
USP39-218ENST00000493829 CREBZFQ9NS37 354 aa22.42■■□□□ 1.18
USP39-218ENST00000493829 GJB4Q9NTQ9 266 aa22.42■■□□□ 1.18
USP39-218ENST00000493829 DEXIO95424 95 aa22.42■■□□□ 1.18
USP39-218ENST00000493829 HTRA3P83110 453 aa22.42■■□□□ 1.18
USP39-218ENST00000493829 PKN1Q16512 942 aa22.42■■□□□ 1.18
USP39-218ENST00000493829 CCDC174Q6PII3 467 aa22.42■■□□□ 1.18
USP39-218ENST00000493829 CATSPERGQ6ZRH7 1159 aa22.42■■□□□ 1.18
USP39-218ENST00000493829 HEATR3Q7Z4Q2 680 aa22.42■■□□□ 1.18
USP39-218ENST00000493829 FAM155AB1AL88 458 aaPredicted RBP22.41■■□□□ 1.18
USP39-218ENST00000493829 GUCY1B3Q02153 619 aa22.41■■□□□ 1.18
USP39-218ENST00000493829 GPAT2Q6NUI2 795 aa22.41■■□□□ 1.18
USP39-218ENST00000493829 ATG4CQ96DT6 458 aa22.41■■□□□ 1.18
USP39-218ENST00000493829 PPP1R9AQ9ULJ8 1098 aa22.41■■□□□ 1.18
USP39-218ENST00000493829 RLFQ13129 1914 aa22.41■■□□□ 1.18
USP39-218ENST00000493829 SMARCA1P28370 1054 aa22.4■■□□□ 1.18
USP39-218ENST00000493829 IRX3P78415 501 aaPredicted RBP22.4■■□□□ 1.18
USP39-218ENST00000493829 QRICH1Q2TAL8 776 aa22.4■■□□□ 1.18
USP39-218ENST00000493829 PPP1R11O60927 126 aaPredicted RBP22.39■■□□□ 1.18
USP39-218ENST00000493829 SCG2P13521 617 aa22.39■■□□□ 1.18
USP39-218ENST00000493829 PFKFB3Q16875 520 aaPredicted RBP22.39■■□□□ 1.18
USP39-218ENST00000493829 OTUD7BQ6GQQ9 843 aa22.39■■□□□ 1.18
USP39-218ENST00000493829 PRPF38AQ8NAV1 312 aaKnown RBP22.39■■□□□ 1.18
USP39-218ENST00000493829 CCDC102AQ96A19 550 aa22.39■■□□□ 1.18
USP39-218ENST00000493829 VPS54Q9P1Q0 977 aa22.39■■□□□ 1.18
USP39-218ENST00000493829 BTBD19C9JJ37 291 aa22.39■■□□□ 1.17
USP39-218ENST00000493829 ZBTB5O15062 677 aa22.39■■□□□ 1.17
USP39-218ENST00000493829 PLA2G6O60733 806 aa22.39■■□□□ 1.17
USP39-218ENST00000493829 USH1GQ495M9 461 aa22.39■■□□□ 1.17
USP39-218ENST00000493829 WWC2Q6AWC2 1192 aa22.39■■□□□ 1.17
USP39-218ENST00000493829 WASF1Q92558 559 aa22.39■■□□□ 1.17
USP39-218ENST00000493829 HHIPL1Q96JK4 782 aa22.39■■□□□ 1.17
USP39-218ENST00000493829 ASCC2Q9H1I8 757 aaPredicted RBP22.39■■□□□ 1.17
USP39-218ENST00000493829 KIF3AQ9Y496 699 aa22.39■■□□□ 1.17
USP39-218ENST00000493829 COL11A1P12107 1806 aaPredicted RBP22.38■■□□□ 1.17
USP39-218ENST00000493829 VPS37CA5D8V6 355 aaPredicted RBP22.38■■□□□ 1.17
USP39-218ENST00000493829 SPDYE16A6NNV3 312 aaPredicted RBP22.38■■□□□ 1.17
USP39-218ENST00000493829 PDHXO00330 501 aa22.38■■□□□ 1.17
USP39-218ENST00000493829 PKP1Q13835 747 aa22.38■■□□□ 1.17
USP39-218ENST00000493829 COG2Q14746 738 aa22.38■■□□□ 1.17
USP39-218ENST00000493829 LARP1BQ659C4 914 aaKnown RBP22.38■■□□□ 1.17
USP39-218ENST00000493829 FAM43AQ8N2R8 423 aa22.38■■□□□ 1.17
USP39-218ENST00000493829 MTMR8Q96EF0 704 aa22.38■■□□□ 1.17
USP39-218ENST00000493829 C8orf76Q96K31 380 aa22.38■■□□□ 1.17
USP39-218ENST00000493829 ZIC5Q96T25 663 aa22.38■■□□□ 1.17
USP39-218ENST00000493829 RANBP17Q9H2T7 1088 aaKnown RBP22.38■■□□□ 1.17
USP39-218ENST00000493829 CWC22Q9HCG8 908 aaKnown RBP22.38■■□□□ 1.17
USP39-218ENST00000493829 RBM27Q9P2N5 1060 aaKnown RBP22.38■■□□□ 1.17
USP39-218ENST00000493829 CTDP1Q9Y5B0 961 aaPredicted RBP22.38■■□□□ 1.17
USP39-218ENST00000493829 PNMA6FA0A0J9YX94 578 aa22.37■■□□□ 1.17
Retrieved 100 of 20,778 RNA–protein pairs in 57.8 ms