RNA–Protein interactions for RNA: ENST00000490278.1

CD46-216, Transcript of CD46 molecule, humanhuman

TSL 2

Gene CD46, Length 747 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD46-216ENST00000490278 SEMA3GQ9NS98 782 aa5.91□□□□□ -1.46
CD46-216ENST00000490278 BSDC1Q9NW68 430 aaPredicted RBP5.91□□□□□ -1.46
CD46-216ENST00000490278 ZSWIM5Q9P217 1185 aa5.91□□□□□ -1.46
CD46-216ENST00000490278 LRP2BPQ9P2M1 347 aa5.91□□□□□ -1.46
CD46-216ENST00000490278 PFDN2Q9UHV9 154 aa5.91□□□□□ -1.46
CD46-216ENST00000490278 MEIS1O00470 390 aa5.9□□□□□ -1.46
CD46-216ENST00000490278 NOP56O00567 594 aaKnown RBP5.9□□□□□ -1.46
CD46-216ENST00000490278 TPP2P29144 1249 aaPredicted RBP5.9□□□□□ -1.46
CD46-216ENST00000490278 PRKCQQ04759 706 aa5.9□□□□□ -1.46
CD46-216ENST00000490278 ARTNQ5T4W7 220 aa5.9□□□□□ -1.46
CD46-216ENST00000490278 LRRC47Q8N1G4 583 aaKnown RBP5.9□□□□□ -1.46
CD46-216ENST00000490278 ARHGEF39Q8N4T4 335 aa5.9□□□□□ -1.46
CD46-216ENST00000490278 LRRN4CLQ8ND94 238 aa5.9□□□□□ -1.46
CD46-216ENST00000490278 ASB11Q8WXH4 323 aa5.9□□□□□ -1.46
CD46-216ENST00000490278 MISP3Q96FF7 219 aa5.9□□□□□ -1.46
CD46-216ENST00000490278 SGSM3Q96HU1 749 aa5.9□□□□□ -1.46
CD46-216ENST00000490278 ZFP64Q9NPA5 681 aa5.9□□□□□ -1.46
CD46-216ENST00000490278 CGGBP1Q9UFW8 167 aaPredicted RBP5.9□□□□□ -1.46
CD46-216ENST00000490278 ZMYM5Q9UJ78 669 aa5.9□□□□□ -1.46
CD46-216ENST00000490278 VAV3Q9UKW4 847 aa5.9□□□□□ -1.46
CD46-216ENST00000490278 MINPP1Q9UNW1 487 aa5.9□□□□□ -1.46
CD46-216ENST00000490278 AKT3Q9Y243 479 aa5.9□□□□□ -1.46
CD46-216ENST00000490278 SF3B6Q9Y3B4 125 aaKnown RBP5.9□□□□□ -1.46
CD46-216ENST00000490278 PITPNM2Q9BZ72 1349 aa5.9□□□□□ -1.47
CD46-216ENST00000490278 GSNP06396 782 aa5.89□□□□□ -1.47
CD46-216ENST00000490278 ITGAVP06756 1048 aa5.89□□□□□ -1.47
CD46-216ENST00000490278 SSRP1Q08945 709 aaKnown RBP5.89□□□□□ -1.47
CD46-216ENST00000490278 PPP2R5DQ14738 602 aa5.89□□□□□ -1.47
CD46-216ENST00000490278 AOC3Q16853 763 aa5.89□□□□□ -1.47
CD46-216ENST00000490278 GAB4Q2WGN9 574 aa5.89□□□□□ -1.47
CD46-216ENST00000490278 GIMAP6Q6P9H5 292 aa5.89□□□□□ -1.47
CD46-216ENST00000490278 POMZP3Q6PJE2 187 aa5.89□□□□□ -1.47
CD46-216ENST00000490278 TCTN2Q96GX1 697 aa5.89□□□□□ -1.47
CD46-216ENST00000490278 SPATA9Q9BWV2 254 aa5.89□□□□□ -1.47
CD46-216ENST00000490278 EMC9Q9Y3B6 208 aa5.89□□□□□ -1.47
CD46-216ENST00000490278 KDM2BQ8NHM5 1336 aa5.89□□□□□ -1.47
CD46-216ENST00000490278 WASH4PA8MWX3 477 aa5.88□□□□□ -1.47
CD46-216ENST00000490278 H0Y8X5 98 aa5.88□□□□□ -1.47
CD46-216ENST00000490278 DIAPH1O60610 1272 aaKnown RBP5.88□□□□□ -1.47
CD46-216ENST00000490278 CTSKP43235 329 aa5.88□□□□□ -1.47
CD46-216ENST00000490278 CD97P48960 835 aa5.88□□□□□ -1.47
CD46-216ENST00000490278 GRB10Q13322 594 aa5.88□□□□□ -1.47
CD46-216ENST00000490278 CWF19L1Q69YN2 538 aaKnown RBP5.88□□□□□ -1.47
CD46-216ENST00000490278 CRTC3Q6UUV7 619 aa5.88□□□□□ -1.47
CD46-216ENST00000490278 TMPRSS7Q7RTY8 843 aa5.88□□□□□ -1.47
CD46-216ENST00000490278 ZNF227Q86WZ6 799 aa5.88□□□□□ -1.47
CD46-216ENST00000490278 STK11IPQ8N1F8 1099 aa5.88□□□□□ -1.47
CD46-216ENST00000490278 LILRB2Q8N423 598 aa5.88□□□□□ -1.47
CD46-216ENST00000490278 ZDHHC15Q96MV8 337 aa5.88□□□□□ -1.47
CD46-216ENST00000490278 CWC22Q9HCG8 908 aaKnown RBP5.88□□□□□ -1.47
CD46-216ENST00000490278 ATP13A1Q9HD20 1204 aa5.88□□□□□ -1.47
CD46-216ENST00000490278 DUSP13Q9UII6 198 aa5.88□□□□□ -1.47
CD46-216ENST00000490278 A0A1W2PQU0 124 aa5.87□□□□□ -1.47
CD46-216ENST00000490278 TLDC2A0PJX2 215 aa5.87□□□□□ -1.47
CD46-216ENST00000490278 MED26O95402 600 aa5.87□□□□□ -1.47
CD46-216ENST00000490278 SSTR4P31391 388 aa5.87□□□□□ -1.47
CD46-216ENST00000490278 BMP8BP34820 402 aa5.87□□□□□ -1.47
CD46-216ENST00000490278 PCBP3P57721 371 aaKnown RBP5.87□□□□□ -1.47
CD46-216ENST00000490278 HSP90AA2PQ14568 343 aaPredicted RBP5.87□□□□□ -1.47
CD46-216ENST00000490278 DTX1Q86Y01 620 aa5.87□□□□□ -1.47
CD46-216ENST00000490278 CREG2Q8IUH2 290 aa5.87□□□□□ -1.47
CD46-216ENST00000490278 TRIM59Q8IWR1 403 aa5.87□□□□□ -1.47
CD46-216ENST00000490278 USHBP1Q8N6Y0 703 aa5.87□□□□□ -1.47
CD46-216ENST00000490278 LINC00116Q8NCU8 138 aa5.87□□□□□ -1.47
CD46-216ENST00000490278 THAP3Q8WTV1 239 aaPredicted RBP5.87□□□□□ -1.47
CD46-216ENST00000490278 BCL7CQ8WUZ0 217 aaPredicted RBP5.87□□□□□ -1.47
CD46-216ENST00000490278 MRGPRX3Q96LB0 322 aa5.87□□□□□ -1.47
CD46-216ENST00000490278 LGR4Q9BXB1 951 aa5.87□□□□□ -1.47
CD46-216ENST00000490278 GOLGA2P5Q9HBQ8 144 aa5.87□□□□□ -1.47
CD46-216ENST00000490278 SLC5A6Q9Y289 635 aa5.87□□□□□ -1.47
CD46-216ENST00000490278 TMA7Q9Y2S6 64 aaKnown RBP5.87□□□□□ -1.47
CD46-216ENST00000490278 TBX22Q9Y458 520 aa5.87□□□□□ -1.47
CD46-216ENST00000490278 SSU72P8A0A1W2PR75 194 aa5.86□□□□□ -1.47
CD46-216ENST00000490278 ADCY3O60266 1144 aa5.86□□□□□ -1.47
CD46-216ENST00000490278 KCNH1O95259 989 aa5.86□□□□□ -1.47
CD46-216ENST00000490278 PRNPP04156 253 aa5.86□□□□□ -1.47
CD46-216ENST00000490278 SPINK2P20155 84 aa5.86□□□□□ -1.47
CD46-216ENST00000490278 LTKP29376 864 aa5.86□□□□□ -1.47
CD46-216ENST00000490278 NOP2P46087 812 aaKnown RBP5.86□□□□□ -1.47
CD46-216ENST00000490278 PPP2R2AP63151 447 aa5.86□□□□□ -1.47
CD46-216ENST00000490278 AMPD2Q01433 879 aa5.86□□□□□ -1.47
CD46-216ENST00000490278 POU4F1Q01851 419 aa5.86□□□□□ -1.47
CD46-216ENST00000490278 BNIP3Q12983 259 aa5.86□□□□□ -1.47
CD46-216ENST00000490278 IKZF1Q13422 519 aa5.86□□□□□ -1.47
CD46-216ENST00000490278 RNF111Q6ZNA4 994 aa5.86□□□□□ -1.47
CD46-216ENST00000490278 JAZF1Q86VZ6 243 aa5.86□□□□□ -1.47
CD46-216ENST00000490278 SH3TC2Q8TF17 1288 aa5.86□□□□□ -1.47
CD46-216ENST00000490278 AARSD1Q9BTE6 412 aaKnown RBP5.86□□□□□ -1.47
CD46-216ENST00000490278 TCFL5Q9UL49 500 aa5.86□□□□□ -1.47
CD46-216ENST00000490278 MRPL42Q9Y6G3 142 aaKnown RBP5.86□□□□□ -1.47
CD46-216ENST00000490278 TRAV20A0A0B4J274 112 aa5.85□□□□□ -1.47
CD46-216ENST00000490278 KIAA1324LA8MWY0 1029 aaPredicted RBP5.85□□□□□ -1.47
CD46-216ENST00000490278 TBX1O43435 398 aa5.85□□□□□ -1.47
CD46-216ENST00000490278 VAMP4O75379 141 aa5.85□□□□□ -1.47
CD46-216ENST00000490278 ESR1P03372 595 aa5.85□□□□□ -1.47
CD46-216ENST00000490278 SYPP08247 313 aa5.85□□□□□ -1.47
CD46-216ENST00000490278 VAV1P15498 845 aa5.85□□□□□ -1.47
CD46-216ENST00000490278 EGR3Q06889 387 aa5.85□□□□□ -1.47
CD46-216ENST00000490278 LONRF2Q1L5Z9 754 aa5.85□□□□□ -1.47
CD46-216ENST00000490278 C2orf27AQ580R0 203 aa5.85□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms