RNA–Protein interactions for RNA: ENST00000488834.5

SSR1-209, Transcript of signal sequence receptor subunit 1, humanhuman

TSL 4

Gene SSR1, Length 585 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR1-209ENST00000488834 ADCY4Q8NFM4 1077 aa6.26□□□□□ -1.41
SSR1-209ENST00000488834 FGD4Q96M96 766 aa6.26□□□□□ -1.41
SSR1-209ENST00000488834 NOL6Q9H6R4 1146 aaKnown RBP6.26□□□□□ -1.41
SSR1-209ENST00000488834 PRR13Q9NZ81 148 aa6.26□□□□□ -1.41
SSR1-209ENST00000488834 WHRNQ9P202 907 aa6.26□□□□□ -1.41
SSR1-209ENST00000488834 ZMYM5Q9UJ78 669 aa6.26□□□□□ -1.41
SSR1-209ENST00000488834 TMEM59LQ9UK28 342 aa6.26□□□□□ -1.41
SSR1-209ENST00000488834 SF3B6Q9Y3B4 125 aaKnown RBP6.26□□□□□ -1.41
SSR1-209ENST00000488834 DNAJC25-GNG10A0A024R161 153 aa6.25□□□□□ -1.41
SSR1-209ENST00000488834 U2SURPO15042 1029 aaKnown RBP6.25□□□□□ -1.41
SSR1-209ENST00000488834 SHOXO15266 292 aa6.25□□□□□ -1.41
SSR1-209ENST00000488834 GSNP06396 782 aa6.25□□□□□ -1.41
SSR1-209ENST00000488834 ZNF445P59923 1031 aa6.25□□□□□ -1.41
SSR1-209ENST00000488834 DUSP4Q13115 394 aa6.25□□□□□ -1.41
SSR1-209ENST00000488834 PPP2R5DQ14738 602 aa6.25□□□□□ -1.41
SSR1-209ENST00000488834 CRTC3Q6UUV7 619 aa6.25□□□□□ -1.41
SSR1-209ENST00000488834 WAPLQ7Z5K2 1190 aa6.25□□□□□ -1.41
SSR1-209ENST00000488834 FIBCD1Q8N539 461 aa6.25□□□□□ -1.41
SSR1-209ENST00000488834 LINC00116Q8NCU8 138 aa6.25□□□□□ -1.41
SSR1-209ENST00000488834 HNRNPLLQ8WVV9 542 aaKnown RBP6.25□□□□□ -1.41
SSR1-209ENST00000488834 KLHL6Q8WZ60 621 aa6.25□□□□□ -1.41
SSR1-209ENST00000488834 ZDHHC15Q96MV8 337 aa6.25□□□□□ -1.41
SSR1-209ENST00000488834 CDADC1Q9BWV3 514 aa6.25□□□□□ -1.41
SSR1-209ENST00000488834 FHOD1Q9Y613 1164 aa6.25□□□□□ -1.41
SSR1-209ENST00000488834 ANKRD34BA5PLL1 514 aa6.24□□□□□ -1.41
SSR1-209ENST00000488834 CBFA2T2O43439 604 aa6.24□□□□□ -1.41
SSR1-209ENST00000488834 ENDOUP21128 410 aaKnown RBP6.24□□□□□ -1.41
SSR1-209ENST00000488834 RALGPS1Q5JS13 557 aa6.24□□□□□ -1.41
SSR1-209ENST00000488834 FAM178BQ8IXR5 827 aa6.24□□□□□ -1.41
SSR1-209ENST00000488834 USHBP1Q8N6Y0 703 aa6.24□□□□□ -1.41
SSR1-209ENST00000488834 APBA2Q99767 749 aa6.24□□□□□ -1.41
SSR1-209ENST00000488834 ADAMTS10Q9H324 1103 aa6.24□□□□□ -1.41
SSR1-209ENST00000488834 H0Y8X5 98 aa6.23□□□□□ -1.41
SSR1-209ENST00000488834 TAL1P17542 331 aaPredicted RBP6.23□□□□□ -1.41
SSR1-209ENST00000488834 BMP8BP34820 402 aa6.23□□□□□ -1.41
SSR1-209ENST00000488834 GDNFP39905 211 aa6.23□□□□□ -1.41
SSR1-209ENST00000488834 AFMP43652 599 aa6.23□□□□□ -1.41
SSR1-209ENST00000488834 TEKQ02763 1124 aa6.23□□□□□ -1.41
SSR1-209ENST00000488834 CBLL1Q75N03 491 aa6.23□□□□□ -1.41
SSR1-209ENST00000488834 ATG4DQ86TL0 474 aaPredicted RBP6.23□□□□□ -1.41
SSR1-209ENST00000488834 OXR1Q8N573 874 aa6.23□□□□□ -1.41
SSR1-209ENST00000488834 NAT16Q8N8M0 369 aa6.23□□□□□ -1.41
SSR1-209ENST00000488834 KLHL25Q9H0H3 589 aa6.23□□□□□ -1.41
SSR1-209ENST00000488834 ST7Q9NRC1 585 aa6.23□□□□□ -1.41
SSR1-209ENST00000488834 LRP2BPQ9P2M1 347 aa6.23□□□□□ -1.41
SSR1-209ENST00000488834 CTNND2Q9UQB3 1225 aa6.23□□□□□ -1.41
SSR1-209ENST00000488834 DIS3Q9Y2L1 958 aaKnown RBP6.23□□□□□ -1.41
SSR1-209ENST00000488834 A0A087WZG4 1122 aa6.22□□□□□ -1.41
SSR1-209ENST00000488834 B2RBV5 119 aa6.22□□□□□ -1.41
SSR1-209ENST00000488834 NOP56O00567 594 aaKnown RBP6.22□□□□□ -1.41
SSR1-209ENST00000488834 CD3EP07766 207 aa6.22□□□□□ -1.41
SSR1-209ENST00000488834 CTSKP43235 329 aa6.22□□□□□ -1.41
SSR1-209ENST00000488834 NOP2P46087 812 aaKnown RBP6.22□□□□□ -1.41
SSR1-209ENST00000488834 POU4F1Q01851 419 aa6.22□□□□□ -1.41
SSR1-209ENST00000488834 CRACR2BQ8N4Y2 399 aaPredicted RBP6.22□□□□□ -1.41
SSR1-209ENST00000488834 GSTM1P09488 218 aa6.21□□□□□ -1.42
SSR1-209ENST00000488834 ZGLP1P0C6A0 271 aa6.21□□□□□ -1.42
SSR1-209ENST00000488834 VAV1P15498 845 aa6.21□□□□□ -1.42
SSR1-209ENST00000488834 JUNBP17275 347 aaPredicted RBP6.21□□□□□ -1.42
SSR1-209ENST00000488834 ZNF143P52747 638 aaPredicted RBP6.21□□□□□ -1.42
SSR1-209ENST00000488834 SLC14A2Q15849 920 aa6.21□□□□□ -1.42
SSR1-209ENST00000488834 KCNMB1Q16558 191 aa6.21□□□□□ -1.42
SSR1-209ENST00000488834 SV2CQ496J9 727 aa6.21□□□□□ -1.42
SSR1-209ENST00000488834 EEPD1Q7L9B9 569 aa6.21□□□□□ -1.42
SSR1-209ENST00000488834 SPPL2CQ8IUH8 684 aa6.21□□□□□ -1.42
SSR1-209ENST00000488834 PDZD8Q8NEN9 1154 aa6.21□□□□□ -1.42
SSR1-209ENST00000488834 FLAD1Q8NFF5 587 aa6.21□□□□□ -1.42
SSR1-209ENST00000488834 MYLIPQ8WY64 445 aa6.21□□□□□ -1.42
SSR1-209ENST00000488834 KIRREL1Q96J84 757 aa6.21□□□□□ -1.42
SSR1-209ENST00000488834 HIRIP3Q9BW71 556 aaPredicted RBP6.21□□□□□ -1.42
SSR1-209ENST00000488834 AKT3Q9Y243 479 aa6.21□□□□□ -1.42
SSR1-209ENST00000488834 FITM1A5D6W6 292 aa6.2□□□□□ -1.42
SSR1-209ENST00000488834 AGRPO00253 132 aa6.2□□□□□ -1.42
SSR1-209ENST00000488834 ZNF205O95201 554 aa6.2□□□□□ -1.42
SSR1-209ENST00000488834 AMPD2Q01433 879 aa6.2□□□□□ -1.42
SSR1-209ENST00000488834 CHRNEQ04844 493 aa6.2□□□□□ -1.42
SSR1-209ENST00000488834 DDR2Q16832 855 aa6.2□□□□□ -1.42
SSR1-209ENST00000488834 POMZP3Q6PJE2 187 aa6.2□□□□□ -1.42
SSR1-209ENST00000488834 ZPBP2Q6X784 338 aa6.2□□□□□ -1.42
SSR1-209ENST00000488834 ANKS4BQ8N8V4 417 aa6.2□□□□□ -1.42
SSR1-209ENST00000488834 ABHD4Q8TB40 342 aa6.2□□□□□ -1.42
SSR1-209ENST00000488834 SREK1Q8WXA9 508 aaKnown RBP6.2□□□□□ -1.42
SSR1-209ENST00000488834 ASIC4Q96FT7 647 aa6.2□□□□□ -1.42
SSR1-209ENST00000488834 FCRL2Q96LA5 508 aaPredicted RBP6.2□□□□□ -1.42
SSR1-209ENST00000488834 AP5S1Q9NUS5 200 aa6.2□□□□□ -1.42
SSR1-209ENST00000488834 CGGBP1Q9UFW8 167 aaPredicted RBP6.2□□□□□ -1.42
SSR1-209ENST00000488834 CCDC85CA6NKD9 419 aa6.19□□□□□ -1.42
SSR1-209ENST00000488834 SUSD5O60279 629 aa6.19□□□□□ -1.42
SSR1-209ENST00000488834 USP2O75604 605 aaPredicted RBP6.19□□□□□ -1.42
SSR1-209ENST00000488834 GJB6O95452 261 aa6.19□□□□□ -1.42
SSR1-209ENST00000488834 RAB33AQ14088 237 aa6.19□□□□□ -1.42
SSR1-209ENST00000488834 DPY19L1Q2PZI1 675 aa6.19□□□□□ -1.42
SSR1-209ENST00000488834 TMEM67Q5HYA8 995 aa6.19□□□□□ -1.42
SSR1-209ENST00000488834 CEP128Q6ZU80 1094 aa6.19□□□□□ -1.42
SSR1-209ENST00000488834 ZSWIM9Q86XI8 627 aa6.19□□□□□ -1.42
SSR1-209ENST00000488834 CELF2-AS1Q8N7Q2 184 aa6.19□□□□□ -1.42
SSR1-209ENST00000488834 BVESQ8NE79 360 aa6.19□□□□□ -1.42
SSR1-209ENST00000488834 MICAL1Q8TDZ2 1067 aa6.19□□□□□ -1.42
SSR1-209ENST00000488834 FAM168AQ92567 244 aa6.19□□□□□ -1.42
SSR1-209ENST00000488834 APEX2Q9UBZ4 518 aa6.19□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms