RNA–Protein interactions for RNA: ENST00000487172.1

PCOLCE-208, Transcript of procollagen C-endopeptidase enhancer, humanhuman

TSL 2

Gene PCOLCE, Length 686 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCOLCE-208ENST00000487172 A0A0G2JMZ2 1700 aa22.6■■□□□ 1.21
PCOLCE-208ENST00000487172 KLF18A0A0U1RQI7 1052 aa22.59■■□□□ 1.21
PCOLCE-208ENST00000487172 GPR25O00155 361 aa22.59■■□□□ 1.21
PCOLCE-208ENST00000487172 VWA5AO00534 786 aa22.59■■□□□ 1.21
PCOLCE-208ENST00000487172 ZBTB43O43298 467 aa22.59■■□□□ 1.21
PCOLCE-208ENST00000487172 KIF5BP33176 963 aa22.59■■□□□ 1.21
PCOLCE-208ENST00000487172 APOBRQ0VD83 1088 aa22.59■■□□□ 1.21
PCOLCE-208ENST00000487172 PPP2R5BQ15173 497 aa22.59■■□□□ 1.21
PCOLCE-208ENST00000487172 RABEP1Q15276 862 aa22.59■■□□□ 1.21
PCOLCE-208ENST00000487172 ANKRD1Q15327 319 aa22.59■■□□□ 1.21
PCOLCE-208ENST00000487172 FAM110CQ1W6H9 321 aa22.59■■□□□ 1.21
PCOLCE-208ENST00000487172 STAG2Q8N3U4 1231 aa22.59■■□□□ 1.21
PCOLCE-208ENST00000487172 FANCBQ8NB91 859 aa22.59■■□□□ 1.21
PCOLCE-208ENST00000487172 CTCFLQ8NI51 663 aaPredicted RBP22.59■■□□□ 1.21
PCOLCE-208ENST00000487172 KIFC2Q96AC6 838 aa22.59■■□□□ 1.21
PCOLCE-208ENST00000487172 MYL10Q9BUA6 226 aa22.59■■□□□ 1.21
PCOLCE-208ENST00000487172 CPA4Q9UI42 421 aa22.59■■□□□ 1.21
PCOLCE-208ENST00000487172 PRR12Q9ULL5 1215 aa22.59■■□□□ 1.21
PCOLCE-208ENST00000487172 GOLGA8HP0CJ92 632 aa22.58■■□□□ 1.21
PCOLCE-208ENST00000487172 SMARCA1P28370 1054 aa22.58■■□□□ 1.21
PCOLCE-208ENST00000487172 GNAQP50148 359 aa22.58■■□□□ 1.21
PCOLCE-208ENST00000487172 IKQ13123 557 aaPredicted RBP22.58■■□□□ 1.21
PCOLCE-208ENST00000487172 SYDE2Q5VT97 1194 aa22.58■■□□□ 1.21
PCOLCE-208ENST00000487172 REPS2Q8NFH8 660 aa22.58■■□□□ 1.21
PCOLCE-208ENST00000487172 ZNF274Q96GC6 653 aaPredicted RBP22.58■■□□□ 1.21
PCOLCE-208ENST00000487172 SLC38A10Q9HBR0 1119 aa22.58■■□□□ 1.21
PCOLCE-208ENST00000487172 TXNRD2Q9NNW7 524 aa22.58■■□□□ 1.21
PCOLCE-208ENST00000487172 KLRF2D3W0D1 207 aa22.57■■□□□ 1.2
PCOLCE-208ENST00000487172 ATP2A1O14983 1001 aa22.57■■□□□ 1.2
PCOLCE-208ENST00000487172 FOXN1O15353 648 aa22.57■■□□□ 1.2
PCOLCE-208ENST00000487172 ZBED4O75132 1171 aa22.57■■□□□ 1.2
PCOLCE-208ENST00000487172 CNMDO75829 334 aa22.57■■□□□ 1.2
PCOLCE-208ENST00000487172 MICU3Q86XE3 530 aa22.57■■□□□ 1.2
PCOLCE-208ENST00000487172 ANKRD13CQ8N6S4 541 aa22.57■■□□□ 1.2
PCOLCE-208ENST00000487172 GPRC5AQ8NFJ5 357 aa22.57■■□□□ 1.2
PCOLCE-208ENST00000487172 LZTS2Q9BRK4 669 aa22.57■■□□□ 1.2
PCOLCE-208ENST00000487172 RBM28Q9NW13 759 aaKnown RBP22.57■■□□□ 1.2
PCOLCE-208ENST00000487172 BTBD7Q9P203 1132 aa22.57■■□□□ 1.2
PCOLCE-208ENST00000487172 NID2Q14112 1375 aa22.56■■□□□ 1.2
PCOLCE-208ENST00000487172 SLC16A2P36021 539 aa22.56■■□□□ 1.2
PCOLCE-208ENST00000487172 CTCFP49711 727 aaPredicted RBP22.56■■□□□ 1.2
PCOLCE-208ENST00000487172 OAZ1P54368 228 aa22.56■■□□□ 1.2
PCOLCE-208ENST00000487172 AK2P54819 239 aa22.56■■□□□ 1.2
PCOLCE-208ENST00000487172 ERVK-9P63128 1117 aa22.56■■□□□ 1.2
PCOLCE-208ENST00000487172 ERVK-24P63145 666 aa22.56■■□□□ 1.2
PCOLCE-208ENST00000487172 SP3Q02447 781 aa22.56■■□□□ 1.2
PCOLCE-208ENST00000487172 Q3C1V9 767 aa22.56■■□□□ 1.2
PCOLCE-208ENST00000487172 PAGR1Q9BTK6 254 aa22.56■■□□□ 1.2
PCOLCE-208ENST00000487172 UBA5Q9GZZ9 404 aa22.56■■□□□ 1.2
PCOLCE-208ENST00000487172 RANBP17Q9H2T7 1088 aaKnown RBP22.56■■□□□ 1.2
PCOLCE-208ENST00000487172 HSPA8P11142 646 aaKnown RBP22.55■■□□□ 1.2
PCOLCE-208ENST00000487172 RXRAP19793 462 aa22.55■■□□□ 1.2
PCOLCE-208ENST00000487172 PDIA3P30101 505 aaKnown RBP22.55■■□□□ 1.2
PCOLCE-208ENST00000487172 TMEM132BQ14DG7 1078 aa22.55■■□□□ 1.2
PCOLCE-208ENST00000487172 SAMD1Q6SPF0 538 aaPredicted RBP22.55■■□□□ 1.2
PCOLCE-208ENST00000487172 RIOX1Q9H6W3 641 aa22.55■■□□□ 1.2
PCOLCE-208ENST00000487172 TSKSQ9UJT2 592 aa22.55■■□□□ 1.2
PCOLCE-208ENST00000487172 HPS5Q9UPZ3 1129 aa22.55■■□□□ 1.2
PCOLCE-208ENST00000487172 COL11A1P12107 1806 aaPredicted RBP22.54■■□□□ 1.2
PCOLCE-208ENST00000487172 FKTNO75072 461 aa22.54■■□□□ 1.2
PCOLCE-208ENST00000487172 RTN1Q16799 776 aa22.54■■□□□ 1.2
PCOLCE-208ENST00000487172 ADGRF4Q8IZF3 695 aa22.54■■□□□ 1.2
PCOLCE-208ENST00000487172 SPATC1LQ9H0A9 340 aa22.54■■□□□ 1.2
PCOLCE-208ENST00000487172 FAM217BQ9NTX9 383 aaPredicted RBP22.54■■□□□ 1.2
PCOLCE-208ENST00000487172 ZNF214Q9UL59 606 aaPredicted RBP22.54■■□□□ 1.2
PCOLCE-208ENST00000487172 CCDC196A0A1B0GTZ2 297 aa22.53■■□□□ 1.2
PCOLCE-208ENST00000487172 GOLGA8AA7E2F4 631 aa22.53■■□□□ 1.2
PCOLCE-208ENST00000487172 GOLGA8BA8MQT2 603 aa22.53■■□□□ 1.2
PCOLCE-208ENST00000487172 METAP2P50579 478 aaKnown RBP eCLIP22.53■■□□□ 1.2
PCOLCE-208ENST00000487172 CCNA1P78396 465 aa22.53■■□□□ 1.2
PCOLCE-208ENST00000487172 TMTC3Q6ZXV5 915 aa22.53■■□□□ 1.2
PCOLCE-208ENST00000487172 RAB11FIP4Q86YS3 637 aa22.53■■□□□ 1.2
PCOLCE-208ENST00000487172 CCDC144CPQ8IYA2 1237 aa22.53■■□□□ 1.2
PCOLCE-208ENST00000487172 ZNF296Q8WUU4 475 aaPredicted RBP22.53■■□□□ 1.2
PCOLCE-208ENST00000487172 MTMR8Q96EF0 704 aa22.53■■□□□ 1.2
PCOLCE-208ENST00000487172 SPZ1Q9BXG8 430 aa22.53■■□□□ 1.2
PCOLCE-208ENST00000487172 CPVLQ9H3G5 476 aa22.53■■□□□ 1.2
PCOLCE-208ENST00000487172 JMJD4Q9H9V9 463 aa22.53■■□□□ 1.2
PCOLCE-208ENST00000487172 PNMA2Q9UL42 364 aa22.53■■□□□ 1.2
PCOLCE-208ENST00000487172 NAP1L2Q9ULW6 460 aaPredicted RBP22.53■■□□□ 1.2
PCOLCE-208ENST00000487172 CTDP1Q9Y5B0 961 aaPredicted RBP22.53■■□□□ 1.2
PCOLCE-208ENST00000487172 ZNF536O15090 1300 aa22.53■■□□□ 1.2
PCOLCE-208ENST00000487172 CYTH3O43739 400 aa22.52■■□□□ 1.2
PCOLCE-208ENST00000487172 PEX10O60683 326 aa22.52■■□□□ 1.2
PCOLCE-208ENST00000487172 STAT3P40763 770 aa22.52■■□□□ 1.2
PCOLCE-208ENST00000487172 LACTBP83111 547 aaPredicted RBP22.52■■□□□ 1.2
PCOLCE-208ENST00000487172 NBPF11Q86T75 865 aa22.52■■□□□ 1.2
PCOLCE-208ENST00000487172 RIOX2Q8IUF8 465 aa22.52■■□□□ 1.2
PCOLCE-208ENST00000487172 SHCBP1Q8NEM2 672 aa22.52■■□□□ 1.2
PCOLCE-208ENST00000487172 TEX13BQ9BXU2 312 aa22.52■■□□□ 1.2
PCOLCE-208ENST00000487172 TPCN1Q9ULQ1 816 aa22.52■■□□□ 1.2
PCOLCE-208ENST00000487172 CEP350Q5VT06 3117 aa22.51■■□□□ 1.19
PCOLCE-208ENST00000487172 PLEKHA8P1O95397 391 aa22.51■■□□□ 1.19
PCOLCE-208ENST00000487172 SLC25A27O95847 323 aa22.51■■□□□ 1.19
PCOLCE-208ENST00000487172 CDC27P30260 824 aa22.51■■□□□ 1.19
PCOLCE-208ENST00000487172 SLC35G1Q2M3R5 365 aa22.51■■□□□ 1.19
PCOLCE-208ENST00000487172 SRBD1Q8N5C6 995 aaKnown RBP22.51■■□□□ 1.19
PCOLCE-208ENST00000487172 ERO1AQ96HE7 468 aa22.51■■□□□ 1.19
PCOLCE-208ENST00000487172 LARP6Q9BRS8 491 aaKnown RBP22.51■■□□□ 1.19
PCOLCE-208ENST00000487172 MOV10L1Q9BXT6 1211 aaKnown RBP22.51■■□□□ 1.19
Retrieved 100 of 20,778 RNA–protein pairs in 137.4 ms