RNA–Protein interactions for RNA: ENST00000481040.1

COPA-203, Transcript of coatomer protein complex subunit alpha, humanhuman

TSL 3

Gene COPA, Length 578 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPA-203ENST00000481040 LOC101059915A0A1B0GWI6 518 aaPredicted RBP6.98□□□□□ -1.29
COPA-203ENST00000481040 E2F8A0AVK6 867 aa6.98□□□□□ -1.29
COPA-203ENST00000481040 SPDYE3A6NKU9 549 aa6.98□□□□□ -1.29
COPA-203ENST00000481040 CREB3O43889 395 aa6.98□□□□□ -1.29
COPA-203ENST00000481040 KPNA6O60684 536 aa6.98□□□□□ -1.29
COPA-203ENST00000481040 PPM1BO75688 479 aa6.98□□□□□ -1.29
COPA-203ENST00000481040 MYL1P05976 194 aa6.98□□□□□ -1.29
COPA-203ENST00000481040 NLRP12P59046 1061 aa6.98□□□□□ -1.29
COPA-203ENST00000481040 ID3Q02535 119 aa6.98□□□□□ -1.29
COPA-203ENST00000481040 OS9Q13438 667 aaPredicted RBP6.98□□□□□ -1.29
COPA-203ENST00000481040 FOXD4L6Q3SYB3 417 aaPredicted RBP6.98□□□□□ -1.29
COPA-203ENST00000481040 NKAPLQ5M9Q1 402 aa6.98□□□□□ -1.29
COPA-203ENST00000481040 FOXD4L3Q6VB84 417 aaPredicted RBP6.98□□□□□ -1.29
COPA-203ENST00000481040 ILDR2Q71H61 639 aa6.98□□□□□ -1.29
COPA-203ENST00000481040 PASD1Q8IV76 773 aa6.98□□□□□ -1.29
COPA-203ENST00000481040 CHMP4CQ96CF2 233 aa6.98□□□□□ -1.29
COPA-203ENST00000481040 HOOK2Q96ED9 719 aa6.98□□□□□ -1.29
COPA-203ENST00000481040 DPH2Q9BQC3 489 aaPredicted RBP6.98□□□□□ -1.29
COPA-203ENST00000481040 YIPF4Q9BSR8 244 aa6.98□□□□□ -1.29
COPA-203ENST00000481040 TRIM8Q9BZR9 551 aa6.98□□□□□ -1.29
COPA-203ENST00000481040 FBRSQ9HAH7 460 aa6.98□□□□□ -1.29
COPA-203ENST00000481040 ZNF451Q9Y4E5 1061 aa6.98□□□□□ -1.29
COPA-203ENST00000481040 COMMD10Q9Y6G5 202 aa6.98□□□□□ -1.29
COPA-203ENST00000481040 SYNGAP1Q96PV0 1343 aa6.98□□□□□ -1.29
COPA-203ENST00000481040 TM4SF5O14894 197 aa6.97□□□□□ -1.29
COPA-203ENST00000481040 DLX3O60479 287 aa6.97□□□□□ -1.29
COPA-203ENST00000481040 DLGAP3O95886 979 aa6.97□□□□□ -1.29
COPA-203ENST00000481040 NTF4P34130 210 aa6.97□□□□□ -1.29
COPA-203ENST00000481040 IGFALSP35858 605 aa6.97□□□□□ -1.29
COPA-203ENST00000481040 AFF1P51825 1210 aaKnown RBP6.97□□□□□ -1.29
COPA-203ENST00000481040 ANKRD39Q53RE8 183 aa6.97□□□□□ -1.29
COPA-203ENST00000481040 TSHZ1Q6ZSZ6 1077 aa6.97□□□□□ -1.29
COPA-203ENST00000481040 ZBTB46Q86UZ6 589 aa6.97□□□□□ -1.29
COPA-203ENST00000481040 USP7Q93009 1102 aa6.97□□□□□ -1.29
COPA-203ENST00000481040 SCLYQ96I15 445 aa6.97□□□□□ -1.29
COPA-203ENST00000481040 ZNF512BQ96KM6 892 aaPredicted RBP6.97□□□□□ -1.29
COPA-203ENST00000481040 TTC1Q99614 292 aa6.97□□□□□ -1.29
COPA-203ENST00000481040 RTFDC1Q9BY42 306 aaPredicted RBP6.97□□□□□ -1.29
COPA-203ENST00000481040 RAD18Q9NS91 495 aa6.97□□□□□ -1.29
COPA-203ENST00000481040 WHRNQ9P202 907 aa6.97□□□□□ -1.29
COPA-203ENST00000481040 AKT3Q9Y243 479 aa6.97□□□□□ -1.29
COPA-203ENST00000481040 BLACEA4D250 179 aa6.96□□□□□ -1.3
COPA-203ENST00000481040 TMPRSS2O15393 492 aa6.96□□□□□ -1.3
COPA-203ENST00000481040 JMJD7P0C870 316 aa6.96□□□□□ -1.3
COPA-203ENST00000481040 CD247P20963 164 aa6.96□□□□□ -1.3
COPA-203ENST00000481040 FLT3P36888 993 aa6.96□□□□□ -1.3
COPA-203ENST00000481040 TMPRSS15P98073 1019 aa6.96□□□□□ -1.3
COPA-203ENST00000481040 NKG7Q16617 165 aa6.96□□□□□ -1.3
COPA-203ENST00000481040 CFAP100Q494V2 611 aa6.96□□□□□ -1.3
COPA-203ENST00000481040 PRRT3Q5FWE3 981 aa6.96□□□□□ -1.3
COPA-203ENST00000481040 SYCP2LQ5T4T6 812 aa6.96□□□□□ -1.3
COPA-203ENST00000481040 PPP4R4Q6NUP7 873 aa6.96□□□□□ -1.3
COPA-203ENST00000481040 TRIM59Q8IWR1 403 aa6.96□□□□□ -1.3
COPA-203ENST00000481040 TCEAL8Q8IYN2 117 aa6.96□□□□□ -1.3
COPA-203ENST00000481040 CYB5D2Q8WUJ1 264 aa6.96□□□□□ -1.3
COPA-203ENST00000481040 BTN2A2Q8WVV5 523 aa6.96□□□□□ -1.3
COPA-203ENST00000481040 PTPRN2Q92932 1015 aa6.96□□□□□ -1.3
COPA-203ENST00000481040 SLC39A13Q96H72 371 aa6.96□□□□□ -1.3
COPA-203ENST00000481040 RCC1LQ96I51 464 aaKnown RBP6.96□□□□□ -1.3
COPA-203ENST00000481040 CAMKK2Q96RR4 588 aa6.96□□□□□ -1.3
COPA-203ENST00000481040 MKRN2Q9H000 416 aaKnown RBP6.96□□□□□ -1.3
COPA-203ENST00000481040 IFT22Q9H7X7 185 aa6.96□□□□□ -1.3
COPA-203ENST00000481040 PRDM16Q9HAZ2 1276 aa6.96□□□□□ -1.3
COPA-203ENST00000481040 TRHDEQ9UKU6 1024 aa6.96□□□□□ -1.3
COPA-203ENST00000481040 PPP1R9AQ9ULJ8 1098 aa6.96□□□□□ -1.3
COPA-203ENST00000481040 EMC9Q9Y3B6 208 aa6.96□□□□□ -1.3
COPA-203ENST00000481040 DDX3YO15523 660 aaKnown RBP6.95□□□□□ -1.3
COPA-203ENST00000481040 MLC1Q15049 377 aa6.95□□□□□ -1.3
COPA-203ENST00000481040 FAM102BQ5T8I3 360 aa6.95□□□□□ -1.3
COPA-203ENST00000481040 CDCA2Q69YH5 1023 aaPredicted RBP6.95□□□□□ -1.3
COPA-203ENST00000481040 NXNQ6DKJ4 435 aa6.95□□□□□ -1.3
COPA-203ENST00000481040 POMZP3Q6PJE2 187 aa6.95□□□□□ -1.3
COPA-203ENST00000481040 UBE2R2Q712K3 238 aaPredicted RBP6.95□□□□□ -1.3
COPA-203ENST00000481040 WFDC8Q8IUA0 241 aa6.95□□□□□ -1.3
COPA-203ENST00000481040 CRACR2BQ8N4Y2 399 aaPredicted RBP6.95□□□□□ -1.3
COPA-203ENST00000481040 CNTD1Q8N815 330 aa6.95□□□□□ -1.3
COPA-203ENST00000481040 GALNT11Q8NCW6 608 aa6.95□□□□□ -1.3
COPA-203ENST00000481040 RNF214Q8ND24 703 aa6.95□□□□□ -1.3
COPA-203ENST00000481040 PI4K2BQ8TCG2 481 aa6.95□□□□□ -1.3
COPA-203ENST00000481040 COG1Q8WTW3 980 aa6.95□□□□□ -1.3
COPA-203ENST00000481040 MAGEB10Q96LZ2 347 aaPredicted RBP6.95□□□□□ -1.3
COPA-203ENST00000481040 MPHOSPH6Q99547 160 aaKnown RBP6.95□□□□□ -1.3
COPA-203ENST00000481040 CRIM1Q9NZV1 1036 aa6.95□□□□□ -1.3
COPA-203ENST00000481040 ZNF180Q9UJW8 692 aa6.95□□□□□ -1.3
COPA-203ENST00000481040 NOB1Q9ULX3 412 aaKnown RBP6.95□□□□□ -1.3
COPA-203ENST00000481040 SPEF1Q9Y4P9 236 aa6.95□□□□□ -1.3
COPA-203ENST00000481040 A0A0A0MRY4 1105 aa6.94□□□□□ -1.3
COPA-203ENST00000481040 TCRBV16S1A1N1A0A5B0 115 aa6.94□□□□□ -1.3
COPA-203ENST00000481040 NEMP1O14524 444 aa6.94□□□□□ -1.3
COPA-203ENST00000481040 GABRDO14764 452 aa6.94□□□□□ -1.3
COPA-203ENST00000481040 ZEB2O60315 1214 aa6.94□□□□□ -1.3
COPA-203ENST00000481040 LILRB5O75023 590 aa6.94□□□□□ -1.3
COPA-203ENST00000481040 ADAM11O75078 769 aa6.94□□□□□ -1.3
COPA-203ENST00000481040 APBA3O96018 575 aa6.94□□□□□ -1.3
COPA-203ENST00000481040 CST3P01034 146 aaPredicted RBP6.94□□□□□ -1.3
COPA-203ENST00000481040 BPIP17213 487 aa6.94□□□□□ -1.3
COPA-203ENST00000481040 CAP2P40123 477 aa6.94□□□□□ -1.3
COPA-203ENST00000481040 TRIM28Q13263 835 aaKnown RBP6.94□□□□□ -1.3
COPA-203ENST00000481040 SLBPQ14493 270 aaKnown RBP eCLIP6.94□□□□□ -1.3
COPA-203ENST00000481040 SETDB1Q15047 1291 aa6.94□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 882.1 ms