RNA–Protein interactions for RNA: ENST00000475639.5

U2AF1-209, Transcript of U2 small nuclear RNA auxiliary factor 1, humanhuman

TSL 1 (best)

Gene U2AF1, Length 4,694 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1-209ENST00000475639 KCNH5Q8NCM2 988 aa12.71□□□□□ -0.38
U2AF1-209ENST00000475639 MICAL1Q8TDZ2 1067 aa12.71□□□□□ -0.38
U2AF1-209ENST00000475639 KRT23Q9C075 422 aa12.71□□□□□ -0.38
U2AF1-209ENST00000475639 C19orf44Q9H6X5 657 aa12.71□□□□□ -0.38
U2AF1-209ENST00000475639 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP12.71□□□□□ -0.38
U2AF1-209ENST00000475639 SPOPO43791 374 aa12.7□□□□□ -0.38
U2AF1-209ENST00000475639 CCT6AP40227 531 aaKnown RBP12.7□□□□□ -0.38
U2AF1-209ENST00000475639 PPFIA1Q13136 1202 aa12.7□□□□□ -0.38
U2AF1-209ENST00000475639 EDC4Q6P2E9 1401 aaKnown RBP12.7□□□□□ -0.38
U2AF1-209ENST00000475639 POGZQ7Z3K3 1410 aa12.7□□□□□ -0.38
U2AF1-209ENST00000475639 ATXN2Q99700 1313 aaKnown RBP12.7□□□□□ -0.38
U2AF1-209ENST00000475639 GNGT1P63211 74 aa12.7□□□□□ -0.38
U2AF1-209ENST00000475639 PNOCQ13519 176 aa12.7□□□□□ -0.38
U2AF1-209ENST00000475639 TMCO4Q5TGY1 634 aa12.7□□□□□ -0.38
U2AF1-209ENST00000475639 UQCRFS1P1P0C7P4 283 aa12.7□□□□□ -0.38
U2AF1-209ENST00000475639 RASSF2P50749 326 aa12.7□□□□□ -0.38
U2AF1-209ENST00000475639 ITIH3Q06033 890 aa12.7□□□□□ -0.38
U2AF1-209ENST00000475639 TEX13AQ9BXU3 409 aaPredicted RBP12.7□□□□□ -0.38
U2AF1-209ENST00000475639 ZC3H6P61129 1189 aaKnown RBP12.7□□□□□ -0.38
U2AF1-209ENST00000475639 TBC1D8BQ0IIM8 1120 aa12.7□□□□□ -0.38
U2AF1-209ENST00000475639 RTN1Q16799 776 aa12.7□□□□□ -0.38
U2AF1-209ENST00000475639 RTN2O75298 545 aa12.69□□□□□ -0.38
U2AF1-209ENST00000475639 DNAJC8O75937 253 aaPredicted RBP12.69□□□□□ -0.38
U2AF1-209ENST00000475639 RBBP5Q15291 538 aaKnown RBP12.69□□□□□ -0.38
U2AF1-209ENST00000475639 HVCN1Q96D96 273 aa12.69□□□□□ -0.38
U2AF1-209ENST00000475639 GBP5Q96PP8 586 aa12.69□□□□□ -0.38
U2AF1-209ENST00000475639 CNNM2Q9H8M5 875 aa12.69□□□□□ -0.38
U2AF1-209ENST00000475639 POLR3EQ9NVU0 708 aa12.69□□□□□ -0.38
U2AF1-209ENST00000475639 CACNA1FO60840 1977 aa12.69□□□□□ -0.38
U2AF1-209ENST00000475639 KLHL33A6NCF5 533 aa12.69□□□□□ -0.38
U2AF1-209ENST00000475639 BMP6P22004 513 aa12.69□□□□□ -0.38
U2AF1-209ENST00000475639 UBXN1Q04323 297 aa12.69□□□□□ -0.38
U2AF1-209ENST00000475639 CRYMQ14894 314 aa12.69□□□□□ -0.38
U2AF1-209ENST00000475639 HHATQ5VTY9 493 aa12.69□□□□□ -0.38
U2AF1-209ENST00000475639 OTUD7BQ6GQQ9 843 aa12.69□□□□□ -0.38
U2AF1-209ENST00000475639 NAPGQ99747 312 aaPredicted RBP12.69□□□□□ -0.38
U2AF1-209ENST00000475639 TRIM6Q9C030 488 aaPredicted RBP12.69□□□□□ -0.38
U2AF1-209ENST00000475639 MEFVO15553 781 aaPredicted RBP12.69□□□□□ -0.38
U2AF1-209ENST00000475639 AMPD2Q01433 879 aa12.69□□□□□ -0.38
U2AF1-209ENST00000475639 GSPT2Q8IYD1 628 aaKnown RBP12.69□□□□□ -0.38
U2AF1-209ENST00000475639 RNF10Q8N5U6 811 aaKnown RBP12.69□□□□□ -0.38
U2AF1-209ENST00000475639 KLC4Q9NSK0 619 aa12.69□□□□□ -0.38
U2AF1-209ENST00000475639 PA2G4Q9UQ80 394 aaKnown RBP12.69□□□□□ -0.38
U2AF1-209ENST00000475639 CARMIL3Q8ND23 1372 aa12.69□□□□□ -0.38
U2AF1-209ENST00000475639 ARAP3Q8WWN8 1544 aa12.68□□□□□ -0.38
U2AF1-209ENST00000475639 USP14P54578 494 aa12.68□□□□□ -0.38
U2AF1-209ENST00000475639 ACTN3Q08043 901 aaPredicted RBP12.68□□□□□ -0.38
U2AF1-209ENST00000475639 AMOTQ4VCS5 1084 aa12.68□□□□□ -0.38
U2AF1-209ENST00000475639 SH3GL2Q99962 352 aa12.68□□□□□ -0.38
U2AF1-209ENST00000475639 HAUS8Q9BT25 410 aa12.68□□□□□ -0.38
U2AF1-209ENST00000475639 CYP21A2P08686 494 aa12.68□□□□□ -0.38
U2AF1-209ENST00000475639 MYBL2P10244 700 aa12.68□□□□□ -0.38
U2AF1-209ENST00000475639 CMA1P23946 247 aa12.68□□□□□ -0.38
U2AF1-209ENST00000475639 PPP1R2P41236 205 aa12.68□□□□□ -0.38
U2AF1-209ENST00000475639 MTHFSDQ2M296 383 aaKnown RBP12.68□□□□□ -0.38
U2AF1-209ENST00000475639 VWA3BQ502W6 1294 aa12.68□□□□□ -0.38
U2AF1-209ENST00000475639 ERCC6L2Q5T890 1561 aa12.68□□□□□ -0.38
U2AF1-209ENST00000475639 SIGLEC1Q9BZZ2 1709 aa12.68□□□□□ -0.38
U2AF1-209ENST00000475639 SPDYE3A6NKU9 549 aa12.68□□□□□ -0.38
U2AF1-209ENST00000475639 IRX1P78414 480 aaPredicted RBP12.68□□□□□ -0.38
U2AF1-209ENST00000475639 C8orf74Q6P047 294 aa12.68□□□□□ -0.38
U2AF1-209ENST00000475639 RASGRP2Q7LDG7 609 aa12.68□□□□□ -0.38
U2AF1-209ENST00000475639 CPS1P31327 1500 aa12.68□□□□□ -0.38
U2AF1-209ENST00000475639 ZMYND10O75800 440 aa12.68□□□□□ -0.38
U2AF1-209ENST00000475639 STK10O94804 968 aaKnown RBP12.68□□□□□ -0.38
U2AF1-209ENST00000475639 CCNHP51946 323 aaPredicted RBP12.68□□□□□ -0.38
U2AF1-209ENST00000475639 FOXP4Q8IVH2 680 aaPredicted RBP12.68□□□□□ -0.38
U2AF1-209ENST00000475639 PANX2Q96RD6 677 aa12.68□□□□□ -0.38
U2AF1-209ENST00000475639 TSGA10Q9BZW7 698 aa12.68□□□□□ -0.38
U2AF1-209ENST00000475639 XAB2Q9HCS7 855 aaKnown RBP12.68□□□□□ -0.38
U2AF1-209ENST00000475639 AGTPBP1Q9UPW5 1226 aa12.68□□□□□ -0.38
U2AF1-209ENST00000475639 I3L4J1 428 aa12.67□□□□□ -0.38
U2AF1-209ENST00000475639 FDPSP14324 419 aaKnown RBP12.67□□□□□ -0.38
U2AF1-209ENST00000475639 ZNF18P17022 549 aa12.67□□□□□ -0.38
U2AF1-209ENST00000475639 NAPAP54920 295 aa12.67□□□□□ -0.38
U2AF1-209ENST00000475639 GSTO1P78417 241 aa12.67□□□□□ -0.38
U2AF1-209ENST00000475639 IFIT1BQ5T764 474 aaKnown RBP12.67□□□□□ -0.38
U2AF1-209ENST00000475639 STOX1Q6ZVD7 989 aa12.67□□□□□ -0.38
U2AF1-209ENST00000475639 NOX5Q96PH1 765 aa12.67□□□□□ -0.38
U2AF1-209ENST00000475639 TLR7Q9NYK1 1049 aaKnown RBP12.67□□□□□ -0.38
U2AF1-209ENST00000475639 CCDC61Q9Y6R9 512 aa12.67□□□□□ -0.38
U2AF1-209ENST00000475639 AKR1B15C9JRZ8 316 aaPredicted RBP12.67□□□□□ -0.38
U2AF1-209ENST00000475639 RASSF9O75901 435 aa12.67□□□□□ -0.38
U2AF1-209ENST00000475639 TSPY3P0CV98 308 aa12.67□□□□□ -0.38
U2AF1-209ENST00000475639 TSPY8P0CW00 308 aa12.67□□□□□ -0.38
U2AF1-209ENST00000475639 RPS6KA2Q15349 733 aa12.67□□□□□ -0.38
U2AF1-209ENST00000475639 CCDC65Q8IXS2 484 aa12.67□□□□□ -0.38
U2AF1-209ENST00000475639 DDX20Q9UHI6 824 aaKnown RBP12.67□□□□□ -0.38
U2AF1-209ENST00000475639 RIMS1Q86UR5 1692 aaKnown RBP12.67□□□□□ -0.38
U2AF1-209ENST00000475639 BAIAP2L1Q9UHR4 511 aa12.67□□□□□ -0.38
U2AF1-209ENST00000475639 FRMD3A2A2Y4 597 aa12.67□□□□□ -0.38
U2AF1-209ENST00000475639 SPECC1L-ADORA2AF8WAN1 911 aa12.67□□□□□ -0.38
U2AF1-209ENST00000475639 MARCKSP29966 332 aaPredicted RBP12.67□□□□□ -0.38
U2AF1-209ENST00000475639 INPP1P49441 399 aa12.67□□□□□ -0.38
U2AF1-209ENST00000475639 CCDC125Q86Z20 511 aa12.67□□□□□ -0.38
U2AF1-209ENST00000475639 KIFAP3Q92845 792 aa12.67□□□□□ -0.38
U2AF1-209ENST00000475639 BAG5Q9UL15 447 aa12.67□□□□□ -0.38
U2AF1-209ENST00000475639 RAPGEF1Q13905 1077 aa12.66□□□□□ -0.38
U2AF1-209ENST00000475639 HEATR3Q7Z4Q2 680 aa12.66□□□□□ -0.38
U2AF1-209ENST00000475639 KIRREL3Q8IZU9 778 aa12.66□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms