RNA–Protein interactions for RNA: ENST00000467378.1

USP11-205, Transcript of ubiquitin specific peptidase 11, humanhuman

TSL 3

Gene USP11, Length 696 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP11-205ENST00000467378 ZYXQ15942 572 aaKnown RBP22.51■■□□□ 1.19
USP11-205ENST00000467378 MYLIPQ8WY64 445 aa22.51■■□□□ 1.19
USP11-205ENST00000467378 SYMPKQ92797 1274 aaKnown RBP22.51■■□□□ 1.19
USP11-205ENST00000467378 FEZ1Q99689 392 aa22.51■■□□□ 1.19
USP11-205ENST00000467378 TXNRD2Q9NNW7 524 aa22.51■■□□□ 1.19
USP11-205ENST00000467378 TMOD4Q9NZQ9 345 aa22.51■■□□□ 1.19
USP11-205ENST00000467378 CLIP2Q9UDT6 1046 aa22.51■■□□□ 1.19
USP11-205ENST00000467378 VCANP13611 3396 aa22.5■■□□□ 1.19
USP11-205ENST00000467378 TTLL1O95922 423 aa22.5■■□□□ 1.19
USP11-205ENST00000467378 MAPK4P31152 587 aa22.5■■□□□ 1.19
USP11-205ENST00000467378 ATP2B2Q01814 1243 aa22.5■■□□□ 1.19
USP11-205ENST00000467378 KCNB2Q92953 911 aa22.5■■□□□ 1.19
USP11-205ENST00000467378 USP26Q9BXU7 913 aa22.5■■□□□ 1.19
USP11-205ENST00000467378 HSPA4P34932 840 aa22.49■■□□□ 1.19
USP11-205ENST00000467378 HERVK_113P62684 666 aa22.49■■□□□ 1.19
USP11-205ENST00000467378 TSGA10IPQ3SY00 556 aa22.49■■□□□ 1.19
USP11-205ENST00000467378 KIAA1755Q5JYT7 1200 aa22.49■■□□□ 1.19
USP11-205ENST00000467378 RNF20Q5VTR2 975 aa22.49■■□□□ 1.19
USP11-205ENST00000467378 NCOA7Q8NI08 942 aa22.49■■□□□ 1.19
USP11-205ENST00000467378 SH2D4AQ9H788 454 aa22.49■■□□□ 1.19
USP11-205ENST00000467378 VCPKMTQ9H867 229 aa22.49■■□□□ 1.19
USP11-205ENST00000467378 CWC22Q9HCG8 908 aaKnown RBP22.49■■□□□ 1.19
USP11-205ENST00000467378 TRDNQ13061 729 aa22.48■■□□□ 1.19
USP11-205ENST00000467378 SHHQ15465 462 aa22.48■■□□□ 1.19
USP11-205ENST00000467378 C8orf34Q49A92 452 aa22.48■■□□□ 1.19
USP11-205ENST00000467378 PPP4R3BQ5MIZ7 849 aa22.48■■□□□ 1.19
USP11-205ENST00000467378 CYB5R4Q7L1T6 521 aa22.48■■□□□ 1.19
USP11-205ENST00000467378 GPR142Q7Z601 462 aa22.48■■□□□ 1.19
USP11-205ENST00000467378 RASEFQ8IZ41 740 aa22.48■■□□□ 1.19
USP11-205ENST00000467378 USP6NLQ92738 828 aa22.48■■□□□ 1.19
USP11-205ENST00000467378 APBA2Q99767 749 aa22.48■■□□□ 1.19
USP11-205ENST00000467378 ZKSCAN3Q9BRR0 538 aa22.48■■□□□ 1.19
USP11-205ENST00000467378 PAGR1Q9BTK6 254 aa22.48■■□□□ 1.19
USP11-205ENST00000467378 RLFQ13129 1914 aa22.48■■□□□ 1.19
USP11-205ENST00000467378 PARP14Q460N5 1801 aa22.47■■□□□ 1.19
USP11-205ENST00000467378 FOSL2P15408 326 aa22.47■■□□□ 1.19
USP11-205ENST00000467378 COL9A1P20849 921 aa22.47■■□□□ 1.19
USP11-205ENST00000467378 HOXA7P31268 230 aaPredicted RBP22.47■■□□□ 1.19
USP11-205ENST00000467378 Q3C1V9 767 aa22.47■■□□□ 1.19
USP11-205ENST00000467378 RCSD1Q6JBY9 416 aa22.47■■□□□ 1.19
USP11-205ENST00000467378 PLEKHH3Q7Z736 793 aa22.47■■□□□ 1.19
USP11-205ENST00000467378 TTC14Q96N46 770 aa22.47■■□□□ 1.19
USP11-205ENST00000467378 PORCNQ9H237 461 aa22.47■■□□□ 1.19
USP11-205ENST00000467378 RBPJLQ9UBG7 517 aa22.47■■□□□ 1.19
USP11-205ENST00000467378 SYNPO2Q9UMS6 1093 aa22.47■■□□□ 1.19
USP11-205ENST00000467378 SPTBN5Q9NRC6 3674 aaKnown RBP22.47■■□□□ 1.19
USP11-205ENST00000467378 SEC24BO95487 1268 aa22.46■■□□□ 1.19
USP11-205ENST00000467378 VCAM1P19320 739 aa22.46■■□□□ 1.19
USP11-205ENST00000467378 RTP1P59025 263 aa22.46■■□□□ 1.19
USP11-205ENST00000467378 ERVK-9P63128 1117 aa22.46■■□□□ 1.19
USP11-205ENST00000467378 ERVK-24P63145 666 aa22.46■■□□□ 1.19
USP11-205ENST00000467378 MORN1Q5T089 497 aa22.46■■□□□ 1.19
USP11-205ENST00000467378 IQCA1Q86XH1 822 aa22.46■■□□□ 1.19
USP11-205ENST00000467378 MB21D2Q8IYB1 491 aaPredicted RBP22.46■■□□□ 1.19
USP11-205ENST00000467378 STX8Q9UNK0 236 aa22.46■■□□□ 1.19
USP11-205ENST00000467378 TTC28Q96AY4 2481 aa22.46■■□□□ 1.19
USP11-205ENST00000467378 F5H6K3 240 aa22.45■■□□□ 1.18
USP11-205ENST00000467378 CNGA1P29973 690 aa22.45■■□□□ 1.18
USP11-205ENST00000467378 KLRC3Q07444 240 aa22.45■■□□□ 1.18
USP11-205ENST00000467378 CCDC178Q5BJE1 867 aa22.45■■□□□ 1.18
USP11-205ENST00000467378 C9orf50Q5SZB4 431 aa22.45■■□□□ 1.18
USP11-205ENST00000467378 MFSD14CQ5VZR4 134 aa22.45■■□□□ 1.18
USP11-205ENST00000467378 RALYLQ86SE5 291 aaKnown RBP22.45■■□□□ 1.18
USP11-205ENST00000467378 DGKHQ86XP1 1220 aa22.45■■□□□ 1.18
USP11-205ENST00000467378 ANKS1AQ92625 1134 aa22.45■■□□□ 1.18
USP11-205ENST00000467378 LPAR1Q92633 364 aa22.45■■□□□ 1.18
USP11-205ENST00000467378 ZSCAN10Q96SZ4 725 aaPredicted RBP22.45■■□□□ 1.18
USP11-205ENST00000467378 GOPCQ9HD26 462 aa22.45■■□□□ 1.18
USP11-205ENST00000467378 ATP11BQ9Y2G3 1177 aa22.45■■□□□ 1.18
USP11-205ENST00000467378 LAMA2P24043 3122 aaKnown RBP22.44■■□□□ 1.18
USP11-205ENST00000467378 EYSQ5T1H1 3165 aa22.44■■□□□ 1.18
USP11-205ENST00000467378 COL9A3Q14050 684 aaPredicted RBP22.44■■□□□ 1.18
USP11-205ENST00000467378 CATSPERGQ6ZRH7 1159 aa22.44■■□□□ 1.18
USP11-205ENST00000467378 LRRC47Q8N1G4 583 aaKnown RBP22.44■■□□□ 1.18
USP11-205ENST00000467378 TMEM47Q9BQJ4 181 aa22.44■■□□□ 1.18
USP11-205ENST00000467378 TTYH1Q9H313 450 aaPredicted RBP22.44■■□□□ 1.18
USP11-205ENST00000467378 SNX14Q9Y5W7 946 aa22.44■■□□□ 1.18
USP11-205ENST00000467378 USP17L15C9J2P7 530 aa22.43■■□□□ 1.18
USP11-205ENST00000467378 USP17L13C9JLJ4 530 aa22.43■■□□□ 1.18
USP11-205ENST00000467378 USP17L11C9JVI0 530 aa22.43■■□□□ 1.18
USP11-205ENST00000467378 USP17L18D6R9N7 530 aa22.43■■□□□ 1.18
USP11-205ENST00000467378 USP17L22D6RA61 530 aa22.43■■□□□ 1.18
USP11-205ENST00000467378 USP17L17D6RBQ6 530 aa22.43■■□□□ 1.18
USP11-205ENST00000467378 USP17L19D6RCP7 530 aa22.43■■□□□ 1.18
USP11-205ENST00000467378 USP17L20D6RJB6 530 aa22.43■■□□□ 1.18
USP11-205ENST00000467378 EIF5BO60841 1220 aaKnown RBP22.43■■□□□ 1.18
USP11-205ENST00000467378 TOP1P11387 765 aaKnown RBP22.43■■□□□ 1.18
USP11-205ENST00000467378 ANTXR2P58335 489 aa22.43■■□□□ 1.18
USP11-205ENST00000467378 USP17L24Q0WX57 530 aa22.43■■□□□ 1.18
USP11-205ENST00000467378 MAP2K5Q13163 448 aa22.43■■□□□ 1.18
USP11-205ENST00000467378 SEC23AQ15436 765 aa22.43■■□□□ 1.18
USP11-205ENST00000467378 ADCK5Q3MIX3 580 aa22.43■■□□□ 1.18
USP11-205ENST00000467378 SPICE1Q8N0Z3 855 aa22.43■■□□□ 1.18
USP11-205ENST00000467378 ENAHQ8N8S7 591 aaPredicted RBP22.43■■□□□ 1.18
USP11-205ENST00000467378 GMCL1P1Q8NEA9 526 aa22.43■■□□□ 1.18
USP11-205ENST00000467378 RPAP3Q9H6T3 665 aaPredicted RBP22.43■■□□□ 1.18
USP11-205ENST00000467378 PRDM5Q9NQX1 630 aaPredicted RBP22.43■■□□□ 1.18
USP11-205ENST00000467378 DDX20Q9UHI6 824 aaKnown RBP22.43■■□□□ 1.18
USP11-205ENST00000467378 TNKSO95271 1327 aa22.42■■□□□ 1.18
USP11-205ENST00000467378 WDR46O15213 610 aaKnown RBP22.42■■□□□ 1.18
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms