RNA–Protein interactions for RNA: ENST00000461539.5

C9orf78-203, Transcript of chromosome 9 open reading frame 78, humanhuman

TSL 5

Gene C9orf78, Length 637 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf78-203ENST00000461539 hCG_1642624A0A1W2PR95 340 aa11.33□□□□□ -0.6
C9orf78-203ENST00000461539 MANSC4A6NHS7 340 aaPredicted RBP11.33□□□□□ -0.6
C9orf78-203ENST00000461539 RASSF10A6NK89 507 aa11.33□□□□□ -0.6
C9orf78-203ENST00000461539 FAM155AB1AL88 458 aaPredicted RBP11.33□□□□□ -0.6
C9orf78-203ENST00000461539 JAK2O60674 1132 aa11.33□□□□□ -0.6
C9orf78-203ENST00000461539 CTDNEP1O95476 244 aa11.33□□□□□ -0.6
C9orf78-203ENST00000461539 IRX3P78415 501 aaPredicted RBP11.33□□□□□ -0.6
C9orf78-203ENST00000461539 PABPC4Q13310 644 aaKnown RBP eCLIP11.33□□□□□ -0.6
C9orf78-203ENST00000461539 NTRK3Q16288 839 aa11.33□□□□□ -0.6
C9orf78-203ENST00000461539 SLC35G1Q2M3R5 365 aa11.33□□□□□ -0.6
C9orf78-203ENST00000461539 BTNL9Q6UXG8 535 aa11.33□□□□□ -0.6
C9orf78-203ENST00000461539 CATSPERGQ6ZRH7 1159 aa11.33□□□□□ -0.6
C9orf78-203ENST00000461539 HOMER1Q86YM7 354 aa11.33□□□□□ -0.6
C9orf78-203ENST00000461539 ADGRF4Q8IZF3 695 aa11.33□□□□□ -0.6
C9orf78-203ENST00000461539 CAPNS2Q96L46 248 aa11.33□□□□□ -0.6
C9orf78-203ENST00000461539 SLF1Q9BQI6 1058 aa11.33□□□□□ -0.6
C9orf78-203ENST00000461539 LLPHQ9BRT6 129 aaKnown RBP11.33□□□□□ -0.6
C9orf78-203ENST00000461539 SPZ1Q9BXG8 430 aa11.33□□□□□ -0.6
C9orf78-203ENST00000461539 ORC3Q9UBD5 711 aaPredicted RBP11.33□□□□□ -0.6
C9orf78-203ENST00000461539 CTDP1Q9Y5B0 961 aaPredicted RBP11.33□□□□□ -0.6
C9orf78-203ENST00000461539 CDK5RAP2Q96SN8 1893 aa11.33□□□□□ -0.6
C9orf78-203ENST00000461539 BTBD19C9JJ37 291 aa11.32□□□□□ -0.6
C9orf78-203ENST00000461539 CYTH3O43739 400 aa11.32□□□□□ -0.6
C9orf78-203ENST00000461539 PLA2G6O60733 806 aa11.32□□□□□ -0.6
C9orf78-203ENST00000461539 FMNL1O95466 1100 aaPredicted RBP11.32□□□□□ -0.6
C9orf78-203ENST00000461539 OSBPP22059 807 aa11.32□□□□□ -0.6
C9orf78-203ENST00000461539 SMARCA1P28370 1054 aa11.32□□□□□ -0.6
C9orf78-203ENST00000461539 HOXA7P31268 230 aaPredicted RBP11.32□□□□□ -0.6
C9orf78-203ENST00000461539 SNAP25P60880 206 aa11.32□□□□□ -0.6
C9orf78-203ENST00000461539 HMGN5P82970 282 aaKnown RBP11.32□□□□□ -0.6
C9orf78-203ENST00000461539 HTRA3P83110 453 aa11.32□□□□□ -0.6
C9orf78-203ENST00000461539 FUT2Q10981 343 aa11.32□□□□□ -0.6
C9orf78-203ENST00000461539 MOGSQ13724 837 aa11.32□□□□□ -0.6
C9orf78-203ENST00000461539 COG2Q14746 738 aa11.32□□□□□ -0.6
C9orf78-203ENST00000461539 GPAT2Q6NUI2 795 aa11.32□□□□□ -0.6
C9orf78-203ENST00000461539 PRPF38AQ8NAV1 312 aaKnown RBP11.32□□□□□ -0.6
C9orf78-203ENST00000461539 FAM184AQ8NB25 1140 aa11.32□□□□□ -0.6
C9orf78-203ENST00000461539 RRP36Q96EU6 259 aaKnown RBP11.32□□□□□ -0.6
C9orf78-203ENST00000461539 INTS4Q96HW7 963 aaKnown RBP11.32□□□□□ -0.6
C9orf78-203ENST00000461539 IPO9Q96P70 1041 aaKnown RBP11.32□□□□□ -0.6
C9orf78-203ENST00000461539 PIGSQ96S52 555 aa11.32□□□□□ -0.6
C9orf78-203ENST00000461539 RIOX1Q9H6W3 641 aa11.32□□□□□ -0.6
C9orf78-203ENST00000461539 JMJD4Q9H9V9 463 aa11.32□□□□□ -0.6
C9orf78-203ENST00000461539 SEC63Q9UGP8 760 aaKnown RBP11.32□□□□□ -0.6
C9orf78-203ENST00000461539 PPP1R9AQ9ULJ8 1098 aa11.32□□□□□ -0.6
C9orf78-203ENST00000461539 PRR12Q9ULL5 1215 aa11.32□□□□□ -0.6
C9orf78-203ENST00000461539 CNTNAP5Q8WYK1 1306 aa11.32□□□□□ -0.6
C9orf78-203ENST00000461539 PDHXO00330 501 aa11.31□□□□□ -0.6
C9orf78-203ENST00000461539 PRPF3O43395 683 aaKnown RBP11.31□□□□□ -0.6
C9orf78-203ENST00000461539 GJB2P29033 226 aa11.31□□□□□ -0.6
C9orf78-203ENST00000461539 DSG3P32926 999 aa11.31□□□□□ -0.6
C9orf78-203ENST00000461539 KIF23Q02241 960 aaPredicted RBP11.31□□□□□ -0.6
C9orf78-203ENST00000461539 SREBF2Q12772 1141 aa11.31□□□□□ -0.6
C9orf78-203ENST00000461539 NOGQ13253 232 aa11.31□□□□□ -0.6
C9orf78-203ENST00000461539 CDC37Q16543 378 aaPredicted RBP11.31□□□□□ -0.6
C9orf78-203ENST00000461539 CCDC174Q6PII3 467 aa11.31□□□□□ -0.6
C9orf78-203ENST00000461539 ANKRD23Q86SG2 305 aa11.31□□□□□ -0.6
C9orf78-203ENST00000461539 SMARCC2Q8TAQ2 1214 aa11.31□□□□□ -0.6
C9orf78-203ENST00000461539 ATG4CQ96DT6 458 aa11.31□□□□□ -0.6
C9orf78-203ENST00000461539 P2RX7Q99572 595 aaKnown RBP11.31□□□□□ -0.6
C9orf78-203ENST00000461539 RNF26Q9BY78 433 aaPredicted RBP11.31□□□□□ -0.6
C9orf78-203ENST00000461539 ASCC2Q9H1I8 757 aaPredicted RBP11.31□□□□□ -0.6
C9orf78-203ENST00000461539 HOXC10Q9NYD6 342 aa11.31□□□□□ -0.6
C9orf78-203ENST00000461539 RBM27Q9P2N5 1060 aaKnown RBP11.31□□□□□ -0.6
C9orf78-203ENST00000461539 KIF3AQ9Y496 699 aa11.31□□□□□ -0.6
C9orf78-203ENST00000461539 PNMA6FA0A0J9YX94 578 aa11.3□□□□□ -0.6
C9orf78-203ENST00000461539 TESPA1A2RU30 521 aaPredicted RBP11.3□□□□□ -0.6
C9orf78-203ENST00000461539 ZBTB5O15062 677 aa11.3□□□□□ -0.6
C9orf78-203ENST00000461539 AOC2O75106 756 aa11.3□□□□□ -0.6
C9orf78-203ENST00000461539 ZBED4O75132 1171 aa11.3□□□□□ -0.6
C9orf78-203ENST00000461539 DEXIO95424 95 aa11.3□□□□□ -0.6
C9orf78-203ENST00000461539 FDPSP14324 419 aaKnown RBP11.3□□□□□ -0.6
C9orf78-203ENST00000461539 FOSBP53539 338 aa11.3□□□□□ -0.6
C9orf78-203ENST00000461539 INHBEP58166 350 aa11.3□□□□□ -0.6
C9orf78-203ENST00000461539 C1QTNF8P60827 252 aa11.3□□□□□ -0.6
C9orf78-203ENST00000461539 QRICH1Q2TAL8 776 aa11.3□□□□□ -0.6
C9orf78-203ENST00000461539 OTUD7BQ6GQQ9 843 aa11.3□□□□□ -0.6
C9orf78-203ENST00000461539 FAM43AQ8N2R8 423 aa11.3□□□□□ -0.6
C9orf78-203ENST00000461539 WASF1Q92558 559 aa11.3□□□□□ -0.6
C9orf78-203ENST00000461539 ZIC5Q96T25 663 aa11.3□□□□□ -0.6
C9orf78-203ENST00000461539 PTPN18Q99952 460 aa11.3□□□□□ -0.6
C9orf78-203ENST00000461539 PNMA3Q9UL41 463 aa11.3□□□□□ -0.6
C9orf78-203ENST00000461539 STK36Q9NRP7 1315 aa11.3□□□□□ -0.6
C9orf78-203ENST00000461539 SPDYE16A6NNV3 312 aaPredicted RBP11.29□□□□□ -0.6
C9orf78-203ENST00000461539 IGF2BP3O00425 579 aaKnown RBP eCLIP11.29□□□□□ -0.6
C9orf78-203ENST00000461539 VWA5AO00534 786 aa11.29□□□□□ -0.6
C9orf78-203ENST00000461539 FDX1P10109 184 aa11.29□□□□□ -0.6
C9orf78-203ENST00000461539 CYP2C8P10632 490 aa11.29□□□□□ -0.6
C9orf78-203ENST00000461539 SCG2P13521 617 aa11.29□□□□□ -0.6
C9orf78-203ENST00000461539 HSPA6P17066 643 aa11.29□□□□□ -0.6
C9orf78-203ENST00000461539 HERVK_113P62684 666 aa11.29□□□□□ -0.6
C9orf78-203ENST00000461539 PFKFB3Q16875 520 aaPredicted RBP11.29□□□□□ -0.6
C9orf78-203ENST00000461539 HEATR3Q7Z4Q2 680 aa11.29□□□□□ -0.6
C9orf78-203ENST00000461539 CPXCR1Q8N123 301 aa11.29□□□□□ -0.6
C9orf78-203ENST00000461539 SMCR8Q8TEV9 937 aaPredicted RBP11.29□□□□□ -0.6
C9orf78-203ENST00000461539 MTMR8Q96EF0 704 aa11.29□□□□□ -0.6
C9orf78-203ENST00000461539 PARK7Q99497 189 aaKnown RBP11.29□□□□□ -0.6
C9orf78-203ENST00000461539 ALG1Q9BT22 464 aa11.29□□□□□ -0.6
C9orf78-203ENST00000461539 RANBP17Q9H2T7 1088 aaKnown RBP11.29□□□□□ -0.6
C9orf78-203ENST00000461539 SLC45A1Q9Y2W3 748 aa11.29□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 169.9 ms