RNA–Protein interactions for RNA: ENST00000453689.5

VPS16-205, Transcript of VPS16, CORVET/HOPS core subunit, humanhuman

TSL 3

Gene VPS16, Length 966 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS16-205ENST00000453689 MAP2K5Q13163 448 aa17.21■□□□□ 0.35
VPS16-205ENST00000453689 GRB14Q14449 540 aa17.21■□□□□ 0.35
VPS16-205ENST00000453689 NECTIN1Q15223 517 aa17.21■□□□□ 0.35
VPS16-205ENST00000453689 MTFR1Q15390 333 aa17.21■□□□□ 0.35
VPS16-205ENST00000453689 CCDC178Q5BJE1 867 aa17.21■□□□□ 0.35
VPS16-205ENST00000453689 FAM160B2Q86V87 743 aa17.21■□□□□ 0.35
VPS16-205ENST00000453689 NCAPG2Q86XI2 1143 aa17.21■□□□□ 0.35
VPS16-205ENST00000453689 DGKHQ86XP1 1220 aa17.21■□□□□ 0.35
VPS16-205ENST00000453689 IVNS1ABPQ9Y6Y0 642 aa17.21■□□□□ 0.35
VPS16-205ENST00000453689 BRCA2P51587 3418 aa17.21■□□□□ 0.34
VPS16-205ENST00000453689 LCTP09848 1927 aa17.2■□□□□ 0.34
VPS16-205ENST00000453689 E7EWF7 191 aa17.2■□□□□ 0.34
VPS16-205ENST00000453689 SLC27A2O14975 620 aa17.2■□□□□ 0.34
VPS16-205ENST00000453689 PLA2G6O60733 806 aa17.2■□□□□ 0.34
VPS16-205ENST00000453689 SEC24BO95487 1268 aa17.2■□□□□ 0.34
VPS16-205ENST00000453689 SLC25A27O95847 323 aa17.2■□□□□ 0.34
VPS16-205ENST00000453689 INHAP05111 366 aa17.2■□□□□ 0.34
VPS16-205ENST00000453689 XRCC5P13010 732 aaKnown RBP17.2■□□□□ 0.34
VPS16-205ENST00000453689 STAT3P40763 770 aa17.2■□□□□ 0.34
VPS16-205ENST00000453689 RGS2P41220 211 aa17.2■□□□□ 0.34
VPS16-205ENST00000453689 RGS19P49795 217 aa17.2■□□□□ 0.34
VPS16-205ENST00000453689 UBXN2AP68543 259 aa17.2■□□□□ 0.34
VPS16-205ENST00000453689 IKQ13123 557 aaPredicted RBP17.2■□□□□ 0.34
VPS16-205ENST00000453689 CCDC96Q2M329 555 aa17.2■□□□□ 0.34
VPS16-205ENST00000453689 RNF20Q5VTR2 975 aa17.2■□□□□ 0.34
VPS16-205ENST00000453689 CREB3L3Q68CJ9 461 aa17.2■□□□□ 0.34
VPS16-205ENST00000453689 STOX1Q6ZVD7 989 aa17.2■□□□□ 0.34
VPS16-205ENST00000453689 CYB5R4Q7L1T6 521 aa17.2■□□□□ 0.34
VPS16-205ENST00000453689 RIOX2Q8IUF8 465 aa17.2■□□□□ 0.34
VPS16-205ENST00000453689 ENAHQ8N8S7 591 aaPredicted RBP17.2■□□□□ 0.34
VPS16-205ENST00000453689 CHURC1Q8WUH1 139 aa17.2■□□□□ 0.34
VPS16-205ENST00000453689 TRIB2Q92519 343 aa17.2■□□□□ 0.34
VPS16-205ENST00000453689 ZSCAN10Q96SZ4 725 aaPredicted RBP17.2■□□□□ 0.34
VPS16-205ENST00000453689 APBA2Q99767 749 aa17.2■□□□□ 0.34
VPS16-205ENST00000453689 USP26Q9BXU7 913 aa17.2■□□□□ 0.34
VPS16-205ENST00000453689 MROH8Q9H579 483 aa17.2■□□□□ 0.34
VPS16-205ENST00000453689 SLC38A10Q9HBR0 1119 aa17.2■□□□□ 0.34
VPS16-205ENST00000453689 TNKSO95271 1327 aa17.2■□□□□ 0.34
VPS16-205ENST00000453689 STRNO43815 780 aa17.19■□□□□ 0.34
VPS16-205ENST00000453689 ZBED4O75132 1171 aa17.19■□□□□ 0.34
VPS16-205ENST00000453689 PDHBP11177 359 aa17.19■□□□□ 0.34
VPS16-205ENST00000453689 TRDNQ13061 729 aa17.19■□□□□ 0.34
VPS16-205ENST00000453689 ANKS1AQ92625 1134 aa17.19■□□□□ 0.34
VPS16-205ENST00000453689 TMEM106CQ9BVX2 250 aa17.19■□□□□ 0.34
VPS16-205ENST00000453689 CTDP1Q9Y5B0 961 aaPredicted RBP17.19■□□□□ 0.34
VPS16-205ENST00000453689 ATP2A1O14983 1001 aa17.18■□□□□ 0.34
VPS16-205ENST00000453689 HMGCRP04035 888 aa17.18■□□□□ 0.34
VPS16-205ENST00000453689 SNHG28P0DPA3 235 aa17.18■□□□□ 0.34
VPS16-205ENST00000453689 FDX1P10109 184 aa17.18■□□□□ 0.34
VPS16-205ENST00000453689 CCL5P13501 91 aa17.18■□□□□ 0.34
VPS16-205ENST00000453689 HSPA4P34932 840 aa17.18■□□□□ 0.34
VPS16-205ENST00000453689 TRIM32Q13049 653 aa17.18■□□□□ 0.34
VPS16-205ENST00000453689 CCL14Q16627 93 aa17.18■□□□□ 0.34
VPS16-205ENST00000453689 SNRNP48Q6IEG0 339 aaKnown RBP17.18■□□□□ 0.34
VPS16-205ENST00000453689 TTBK2Q6IQ55 1244 aa17.18■□□□□ 0.34
VPS16-205ENST00000453689 CPXCR1Q8N123 301 aa17.18■□□□□ 0.34
VPS16-205ENST00000453689 PNMA1Q8ND90 353 aa17.18■□□□□ 0.34
VPS16-205ENST00000453689 NCOA7Q8NI08 942 aa17.18■□□□□ 0.34
VPS16-205ENST00000453689 NPLOC4Q8TAT6 608 aa17.18■□□□□ 0.34
VPS16-205ENST00000453689 UBAC1Q9BSL1 405 aa17.18■□□□□ 0.34
VPS16-205ENST00000453689 TEX13BQ9BXU2 312 aa17.18■□□□□ 0.34
VPS16-205ENST00000453689 RAVER2Q9HCJ3 691 aaKnown RBP17.18■□□□□ 0.34
VPS16-205ENST00000453689 FRMPD2Q68DX3 1309 aaPredicted RBP17.18■□□□□ 0.34
VPS16-205ENST00000453689 HOXC6P09630 235 aa17.17■□□□□ 0.34
VPS16-205ENST00000453689 ZKSCAN1P17029 563 aaPredicted RBP17.17■□□□□ 0.34
VPS16-205ENST00000453689 ADORA2AP29274 412 aa17.17■□□□□ 0.34
VPS16-205ENST00000453689 COPB2P35606 906 aa17.17■□□□□ 0.34
VPS16-205ENST00000453689 SEC23AQ15436 765 aa17.17■□□□□ 0.34
VPS16-205ENST00000453689 RALYLQ86SE5 291 aaKnown RBP17.17■□□□□ 0.34
VPS16-205ENST00000453689 TRMT44Q8IYL2 757 aaKnown RBP17.17■□□□□ 0.34
VPS16-205ENST00000453689 BACH2Q9BYV9 841 aa17.17■□□□□ 0.34
VPS16-205ENST00000453689 UNC93B1Q9H1C4 597 aa17.17■□□□□ 0.34
VPS16-205ENST00000453689 KAT14Q9H8E8 782 aa17.17■□□□□ 0.34
VPS16-205ENST00000453689 GPCPD1Q9NPB8 672 aa17.17■□□□□ 0.34
VPS16-205ENST00000453689 PRR12Q9ULL5 1215 aa17.17■□□□□ 0.34
VPS16-205ENST00000453689 RIPK3Q9Y572 518 aa17.17■□□□□ 0.34
VPS16-205ENST00000453689 FCER1AP12319 257 aa17.16■□□□□ 0.34
VPS16-205ENST00000453689 EN2P19622 333 aaPredicted RBP17.16■□□□□ 0.34
VPS16-205ENST00000453689 SLC16A2P36021 539 aa17.16■□□□□ 0.34
VPS16-205ENST00000453689 OAZ1P54368 228 aa17.16■□□□□ 0.34
VPS16-205ENST00000453689 ZNF543Q08ER8 600 aa17.16■□□□□ 0.34
VPS16-205ENST00000453689 BTNL9Q6UXG8 535 aa17.16■□□□□ 0.34
VPS16-205ENST00000453689 ABRAQ8N0Z2 381 aa17.16■□□□□ 0.34
VPS16-205ENST00000453689 KCNB2Q92953 911 aa17.16■□□□□ 0.34
VPS16-205ENST00000453689 MMP19Q99542 508 aa17.16■□□□□ 0.34
VPS16-205ENST00000453689 RNF208Q9H0X6 261 aa17.16■□□□□ 0.34
VPS16-205ENST00000453689 FLRT1Q9NZU1 646 aa17.16■□□□□ 0.34
VPS16-205ENST00000453689 ZNF536O15090 1300 aa17.16■□□□□ 0.34
VPS16-205ENST00000453689 BAZ2BQ9UIF8 2168 aaKnown RBP17.15■□□□□ 0.34
VPS16-205ENST00000453689 COBLO75128 1261 aa17.15■□□□□ 0.34
VPS16-205ENST00000453689 SLC4A3P48751 1232 aa17.15■□□□□ 0.34
VPS16-205ENST00000453689 SNAP25P60880 206 aa17.15■□□□□ 0.34
VPS16-205ENST00000453689 TSGA10IPQ3SY00 556 aa17.15■□□□□ 0.34
VPS16-205ENST00000453689 IFIT1BQ5T764 474 aaKnown RBP17.15■□□□□ 0.34
VPS16-205ENST00000453689 SYDE2Q5VT97 1194 aa17.15■□□□□ 0.34
VPS16-205ENST00000453689 CHST3Q7LGC8 479 aa17.15■□□□□ 0.34
VPS16-205ENST00000453689 DPP9Q86TI2 863 aa17.15■□□□□ 0.34
VPS16-205ENST00000453689 MB21D2Q8IYB1 491 aaPredicted RBP17.15■□□□□ 0.34
VPS16-205ENST00000453689 GJB1P08034 283 aa17.14■□□□□ 0.33
VPS16-205ENST00000453689 ANTXR2P58335 489 aa17.14■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 82 ms