RNA–Protein interactions for RNA: ENST00000452520.1

HMGB1P26-201, Transcript of high mobility group box 1 pseudogene 26, humanhuman

BASIC

Gene HMGB1P26, Length 628 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P26-201ENST00000452520 RNF112Q9ULX5 631 aa7.41□□□□□ -1.22
HMGB1P26-201ENST00000452520 AKT3Q9Y243 479 aa7.41□□□□□ -1.22
HMGB1P26-201ENST00000452520 EMC9Q9Y3B6 208 aa7.41□□□□□ -1.22
HMGB1P26-201ENST00000452520 KDM2BQ8NHM5 1336 aa7.41□□□□□ -1.22
HMGB1P26-201ENST00000452520 A0A1W2PQU0 124 aa7.4□□□□□ -1.22
HMGB1P26-201ENST00000452520 H3BS24 57 aa7.4□□□□□ -1.22
HMGB1P26-201ENST00000452520 MEIS1O00470 390 aa7.4□□□□□ -1.22
HMGB1P26-201ENST00000452520 NOP56O00567 594 aaKnown RBP7.4□□□□□ -1.22
HMGB1P26-201ENST00000452520 COBLO75128 1261 aa7.4□□□□□ -1.22
HMGB1P26-201ENST00000452520 TPP2P29144 1249 aaPredicted RBP7.4□□□□□ -1.22
HMGB1P26-201ENST00000452520 PPP2R5DQ14738 602 aa7.4□□□□□ -1.22
HMGB1P26-201ENST00000452520 MSMPQ1L6U9 139 aa7.4□□□□□ -1.22
HMGB1P26-201ENST00000452520 TCTN2Q96GX1 697 aa7.4□□□□□ -1.22
HMGB1P26-201ENST00000452520 SPATA9Q9BWV2 254 aa7.4□□□□□ -1.22
HMGB1P26-201ENST00000452520 LGR4Q9BXB1 951 aa7.4□□□□□ -1.22
HMGB1P26-201ENST00000452520 VAV3Q9UKW4 847 aa7.4□□□□□ -1.22
HMGB1P26-201ENST00000452520 SF3B6Q9Y3B4 125 aaKnown RBP7.4□□□□□ -1.22
HMGB1P26-201ENST00000452520 PITPNM2Q9BZ72 1349 aa7.39□□□□□ -1.23
HMGB1P26-201ENST00000452520 MED26O95402 600 aa7.39□□□□□ -1.23
HMGB1P26-201ENST00000452520 CAPNS1P04632 268 aa7.39□□□□□ -1.23
HMGB1P26-201ENST00000452520 CTSKP43235 329 aa7.39□□□□□ -1.23
HMGB1P26-201ENST00000452520 PRKCQQ04759 706 aa7.39□□□□□ -1.23
HMGB1P26-201ENST00000452520 AOC3Q16853 763 aa7.39□□□□□ -1.23
HMGB1P26-201ENST00000452520 GAB4Q2WGN9 574 aa7.39□□□□□ -1.23
HMGB1P26-201ENST00000452520 LRRC47Q8N1G4 583 aaKnown RBP7.39□□□□□ -1.23
HMGB1P26-201ENST00000452520 USHBP1Q8N6Y0 703 aa7.39□□□□□ -1.23
HMGB1P26-201ENST00000452520 JMYQ8N9B5 988 aa7.39□□□□□ -1.23
HMGB1P26-201ENST00000452520 HRASLS5Q96KN8 279 aa7.39□□□□□ -1.23
HMGB1P26-201ENST00000452520 MRGPRX3Q96LB0 322 aa7.39□□□□□ -1.23
HMGB1P26-201ENST00000452520 RNPC3Q96LT9 517 aaKnown RBP7.39□□□□□ -1.23
HMGB1P26-201ENST00000452520 CGGBP1Q9UFW8 167 aaPredicted RBP7.39□□□□□ -1.23
HMGB1P26-201ENST00000452520 GSNP06396 782 aa7.38□□□□□ -1.23
HMGB1P26-201ENST00000452520 FAM153BP0C7A2 387 aa7.38□□□□□ -1.23
HMGB1P26-201ENST00000452520 POMZP3Q6PJE2 187 aa7.38□□□□□ -1.23
HMGB1P26-201ENST00000452520 TMPRSS7Q7RTY8 843 aa7.38□□□□□ -1.23
HMGB1P26-201ENST00000452520 JAZF1Q86VZ6 243 aa7.38□□□□□ -1.23
HMGB1P26-201ENST00000452520 ZNF227Q86WZ6 799 aa7.38□□□□□ -1.23
HMGB1P26-201ENST00000452520 ASB11Q8WXH4 323 aa7.38□□□□□ -1.23
HMGB1P26-201ENST00000452520 ZDHHC15Q96MV8 337 aa7.38□□□□□ -1.23
HMGB1P26-201ENST00000452520 CWC22Q9HCG8 908 aaKnown RBP7.38□□□□□ -1.23
HMGB1P26-201ENST00000452520 ATP13A1Q9HD20 1204 aa7.38□□□□□ -1.23
HMGB1P26-201ENST00000452520 BSDC1Q9NW68 430 aaPredicted RBP7.38□□□□□ -1.23
HMGB1P26-201ENST00000452520 TBX22Q9Y458 520 aa7.38□□□□□ -1.23
HMGB1P26-201ENST00000452520 MRPL42Q9Y6G3 142 aaKnown RBP7.38□□□□□ -1.23
HMGB1P26-201ENST00000452520 TBX1O43435 398 aa7.37□□□□□ -1.23
HMGB1P26-201ENST00000452520 ADCY3O60266 1144 aa7.37□□□□□ -1.23
HMGB1P26-201ENST00000452520 VAMP4O75379 141 aa7.37□□□□□ -1.23
HMGB1P26-201ENST00000452520 HSP90AA2PQ14568 343 aaPredicted RBP7.37□□□□□ -1.23
HMGB1P26-201ENST00000452520 TRIM59Q8IWR1 403 aa7.37□□□□□ -1.23
HMGB1P26-201ENST00000452520 CRACR2BQ8N4Y2 399 aaPredicted RBP7.37□□□□□ -1.23
HMGB1P26-201ENST00000452520 ZBTB38Q8NAP3 1195 aaPredicted RBP7.37□□□□□ -1.23
HMGB1P26-201ENST00000452520 SH3TC2Q8TF17 1288 aa7.37□□□□□ -1.23
HMGB1P26-201ENST00000452520 THAP3Q8WTV1 239 aaPredicted RBP7.37□□□□□ -1.23
HMGB1P26-201ENST00000452520 MISP3Q96FF7 219 aa7.37□□□□□ -1.23
HMGB1P26-201ENST00000452520 KANSL2Q9H9L4 492 aa7.37□□□□□ -1.23
HMGB1P26-201ENST00000452520 TMA7Q9Y2S6 64 aaKnown RBP7.37□□□□□ -1.23
HMGB1P26-201ENST00000452520 CADPSQ9ULU8 1353 aa7.36□□□□□ -1.23
HMGB1P26-201ENST00000452520 H0Y8X5 98 aa7.36□□□□□ -1.23
HMGB1P26-201ENST00000452520 PPM1GO15355 546 aaPredicted RBP7.36□□□□□ -1.23
HMGB1P26-201ENST00000452520 KCNH1O95259 989 aa7.36□□□□□ -1.23
HMGB1P26-201ENST00000452520 ESR1P03372 595 aa7.36□□□□□ -1.23
HMGB1P26-201ENST00000452520 VAV1P15498 845 aa7.36□□□□□ -1.23
HMGB1P26-201ENST00000452520 PPP2R2AP63151 447 aa7.36□□□□□ -1.23
HMGB1P26-201ENST00000452520 BNIP3Q12983 259 aa7.36□□□□□ -1.23
HMGB1P26-201ENST00000452520 GRB10Q13322 594 aa7.36□□□□□ -1.23
HMGB1P26-201ENST00000452520 LONRF2Q1L5Z9 754 aa7.36□□□□□ -1.23
HMGB1P26-201ENST00000452520 CWF19L1Q69YN2 538 aaKnown RBP7.36□□□□□ -1.23
HMGB1P26-201ENST00000452520 CREG2Q8IUH2 290 aa7.36□□□□□ -1.23
HMGB1P26-201ENST00000452520 LINC00116Q8NCU8 138 aa7.36□□□□□ -1.23
HMGB1P26-201ENST00000452520 ARHGEF4Q9NR80 690 aa7.36□□□□□ -1.23
HMGB1P26-201ENST00000452520 ADAM23O75077 832 aa7.35□□□□□ -1.23
HMGB1P26-201ENST00000452520 SSTR4P31391 388 aa7.35□□□□□ -1.23
HMGB1P26-201ENST00000452520 BMP8BP34820 402 aa7.35□□□□□ -1.23
HMGB1P26-201ENST00000452520 GRIA2P42262 883 aa7.35□□□□□ -1.23
HMGB1P26-201ENST00000452520 NOP2P46087 812 aaKnown RBP7.35□□□□□ -1.23
HMGB1P26-201ENST00000452520 CD97P48960 835 aa7.35□□□□□ -1.23
HMGB1P26-201ENST00000452520 POU4F1Q01851 419 aa7.35□□□□□ -1.23
HMGB1P26-201ENST00000452520 C2orf27AQ580R0 203 aa7.35□□□□□ -1.23
HMGB1P26-201ENST00000452520 GTF2IRD2BQ6EKJ0 949 aa7.35□□□□□ -1.23
HMGB1P26-201ENST00000452520 CRTC3Q6UUV7 619 aa7.35□□□□□ -1.23
HMGB1P26-201ENST00000452520 GTF2IRD2Q86UP8 949 aa7.35□□□□□ -1.23
HMGB1P26-201ENST00000452520 DTX1Q86Y01 620 aa7.35□□□□□ -1.23
HMGB1P26-201ENST00000452520 BCL7CQ8WUZ0 217 aaPredicted RBP7.35□□□□□ -1.23
HMGB1P26-201ENST00000452520 DUSP13Q9UII6 198 aa7.35□□□□□ -1.23
HMGB1P26-201ENST00000452520 SSU72P8A0A1W2PR75 194 aa7.34□□□□□ -1.23
HMGB1P26-201ENST00000452520 PRNPP04156 253 aa7.34□□□□□ -1.23
HMGB1P26-201ENST00000452520 SYPP08247 313 aa7.34□□□□□ -1.23
HMGB1P26-201ENST00000452520 CD96P40200 585 aa7.34□□□□□ -1.23
HMGB1P26-201ENST00000452520 PCBP3P57721 371 aaKnown RBP7.34□□□□□ -1.23
HMGB1P26-201ENST00000452520 AMPD2Q01433 879 aa7.34□□□□□ -1.23
HMGB1P26-201ENST00000452520 SQSTM1Q13501 440 aa7.34□□□□□ -1.23
HMGB1P26-201ENST00000452520 RNF111Q6ZNA4 994 aa7.34□□□□□ -1.23
HMGB1P26-201ENST00000452520 SPRED2Q7Z698 418 aa7.34□□□□□ -1.23
HMGB1P26-201ENST00000452520 STK11IPQ8N1F8 1099 aa7.34□□□□□ -1.23
HMGB1P26-201ENST00000452520 NLGN1Q8N2Q7 840 aa7.34□□□□□ -1.23
HMGB1P26-201ENST00000452520 FCRL3Q96P31 734 aaPredicted RBP7.34□□□□□ -1.23
HMGB1P26-201ENST00000452520 AARSD1Q9BTE6 412 aaKnown RBP7.34□□□□□ -1.23
HMGB1P26-201ENST00000452520 SLC12A9Q9BXP2 914 aa7.34□□□□□ -1.23
HMGB1P26-201ENST00000452520 NKX2-4Q9H2Z4 354 aa7.34□□□□□ -1.23
HMGB1P26-201ENST00000452520 CYP26B1Q9NR63 512 aa7.34□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms