RNA–Protein interactions for RNA: ENST00000448404.5

SF1-211, Transcript of splicing factor 1, humanhuman

TSL 1 (best)

Gene SF1, Length 2,778 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-211ENST00000448404 AMOTL1Q8IY63 956 aa16.8■□□□□ 0.28
SF1-211ENST00000448404 HOOK1Q9UJC3 728 aaKnown RBP16.8■□□□□ 0.28
SF1-211ENST00000448404 TTF2Q9UNY4 1162 aaKnown RBP16.8■□□□□ 0.28
SF1-211ENST00000448404 IL1R1P14778 569 aa16.79■□□□□ 0.28
SF1-211ENST00000448404 ATP2B4P23634 1241 aa16.79■□□□□ 0.28
SF1-211ENST00000448404 GSTO1P78417 241 aa16.79■□□□□ 0.28
SF1-211ENST00000448404 TTBK2Q6IQ55 1244 aa16.79■□□□□ 0.28
SF1-211ENST00000448404 SH3RF1Q7Z6J0 888 aa16.79■□□□□ 0.28
SF1-211ENST00000448404 MLKLQ8NB16 471 aa16.79■□□□□ 0.28
SF1-211ENST00000448404 SPATA20Q8TB22 786 aa16.79■□□□□ 0.28
SF1-211ENST00000448404 ZBTB9Q96C00 473 aa16.79■□□□□ 0.28
SF1-211ENST00000448404 IRX2Q9BZI1 471 aaPredicted RBP16.79■□□□□ 0.28
SF1-211ENST00000448404 IMPACTQ9P2X3 320 aa16.79■□□□□ 0.28
SF1-211ENST00000448404 CCDC88AQ3V6T2 1871 aa16.79■□□□□ 0.28
SF1-211ENST00000448404 ERCC3P19447 782 aa16.79■□□□□ 0.28
SF1-211ENST00000448404 UTP14CQ5TAP6 766 aaKnown RBP16.79■□□□□ 0.28
SF1-211ENST00000448404 PDXDC2PQ6P474 469 aa16.79■□□□□ 0.28
SF1-211ENST00000448404 CERKQ8TCT0 537 aa16.79■□□□□ 0.28
SF1-211ENST00000448404 SYNRGQ9UMZ2 1314 aa16.79■□□□□ 0.28
SF1-211ENST00000448404 PALM3A6NDB9 673 aaPredicted RBP16.78■□□□□ 0.28
SF1-211ENST00000448404 LDHCP07864 332 aa16.78■□□□□ 0.28
SF1-211ENST00000448404 PPP4R3BQ5MIZ7 849 aa16.78■□□□□ 0.28
SF1-211ENST00000448404 ZNF622Q969S3 477 aaKnown RBP eCLIP16.78■□□□□ 0.287e-8■■□□□ 12
SF1-211ENST00000448404 FERMT2Q96AC1 680 aa16.78■□□□□ 0.28
SF1-211ENST00000448404 NKRFO15226 690 aaKnown RBP eCLIP16.78■□□□□ 0.288e-7■■■□□ 14.6
SF1-211ENST00000448404 NEMFO60524 1076 aa16.78■□□□□ 0.28
SF1-211ENST00000448404 PMS1P54277 932 aaKnown RBP16.78■□□□□ 0.28
SF1-211ENST00000448404 NAALADL2Q58DX5 795 aa16.78■□□□□ 0.28
SF1-211ENST00000448404 C16orf86Q6ZW13 317 aa16.78■□□□□ 0.28
SF1-211ENST00000448404 TMEM139Q8IV31 216 aa16.78■□□□□ 0.28
SF1-211ENST00000448404 KIAA0825Q8IV33 1275 aa16.78■□□□□ 0.28
SF1-211ENST00000448404 CCDC150Q8NCX0 1101 aa16.78■□□□□ 0.28
SF1-211ENST00000448404 RGS22Q8NE09 1264 aa16.78■□□□□ 0.28
SF1-211ENST00000448404 VPS16Q9H269 839 aa16.78■□□□□ 0.28
SF1-211ENST00000448404 DNAI1Q9UI46 699 aa16.78■□□□□ 0.28
SF1-211ENST00000448404 SMCO2A6NFE2 343 aa16.77■□□□□ 0.28
SF1-211ENST00000448404 RNF225M0QZC1 329 aaPredicted RBP16.77■□□□□ 0.28
SF1-211ENST00000448404 MPHOSPH10O00566 681 aaKnown RBP16.77■□□□□ 0.28
SF1-211ENST00000448404 CCNT1O60563 726 aaKnown RBP16.77■□□□□ 0.28
SF1-211ENST00000448404 APTXQ7Z2E3 356 aaKnown RBP16.77■□□□□ 0.28
SF1-211ENST00000448404 TC2NQ8N9U0 490 aa16.77■□□□□ 0.28
SF1-211ENST00000448404 ENOX1Q8TC92 643 aaKnown RBP16.77■□□□□ 0.28
SF1-211ENST00000448404 SOWAHDA6NJG2 315 aa16.77■□□□□ 0.28
SF1-211ENST00000448404 ONECUT3O60422 494 aaPredicted RBP16.77■□□□□ 0.28
SF1-211ENST00000448404 MMP10P09238 476 aa16.77■□□□□ 0.28
SF1-211ENST00000448404 PARP1P09874 1014 aaKnown RBP16.77■□□□□ 0.28
SF1-211ENST00000448404 SNAP25P60880 206 aa16.77■□□□□ 0.28
SF1-211ENST00000448404 BARHL2Q9NY43 387 aa16.77■□□□□ 0.28
SF1-211ENST00000448404 M0R2N6 131 aa16.77■□□□□ 0.27
SF1-211ENST00000448404 STAT6P42226 847 aa16.77■□□□□ 0.27
SF1-211ENST00000448404 TAB2Q9NYJ8 693 aa16.77■□□□□ 0.27
SF1-211ENST00000448404 BBOX1O75936 387 aa16.76■□□□□ 0.27
SF1-211ENST00000448404 KCTD1Q719H9 257 aa16.76■□□□□ 0.27
SF1-211ENST00000448404 IQUBQ8NA54 791 aa16.76■□□□□ 0.27
SF1-211ENST00000448404 ZC3H12CQ9C0D7 883 aaKnown RBP16.76■□□□□ 0.27
SF1-211ENST00000448404 EPC1Q9H2F5 836 aa16.76■□□□□ 0.27
SF1-211ENST00000448404 USP40Q9NVE5 1235 aa16.76■□□□□ 0.27
SF1-211ENST00000448404 LY75O60449 1722 aa16.76■□□□□ 0.27
SF1-211ENST00000448404 CTIFO43310 598 aaKnown RBP16.76■□□□□ 0.27
SF1-211ENST00000448404 IGSF3O75054 1194 aa16.76■□□□□ 0.27
SF1-211ENST00000448404 TECP42680 631 aa16.76■□□□□ 0.27
SF1-211ENST00000448404 UBE2SQ16763 222 aa16.76■□□□□ 0.27
SF1-211ENST00000448404 LAMB1P07942 1786 aa16.75■□□□□ 0.27
SF1-211ENST00000448404 ZNF831Q5JPB2 1677 aa16.75■□□□□ 0.27
SF1-211ENST00000448404 ABL1P00519 1130 aa16.75■□□□□ 0.27
SF1-211ENST00000448404 PRCPP42785 496 aa16.75■□□□□ 0.27
SF1-211ENST00000448404 RBL2Q08999 1139 aa16.75■□□□□ 0.27
SF1-211ENST00000448404 ELF2Q15723 593 aa16.75■□□□□ 0.27
SF1-211ENST00000448404 NEDD1Q8NHV4 660 aa16.75■□□□□ 0.27
SF1-211ENST00000448404 PES1O00541 588 aaKnown RBP16.75■□□□□ 0.27
SF1-211ENST00000448404 RGL2O15211 777 aa16.75■□□□□ 0.27
SF1-211ENST00000448404 CBFA2T2O43439 604 aa16.75■□□□□ 0.27
SF1-211ENST00000448404 ADRA2BP18089 450 aa16.75■□□□□ 0.27
SF1-211ENST00000448404 SPECC1LQ69YQ0 1117 aa16.75■□□□□ 0.27
SF1-211ENST00000448404 DTHD1Q6ZMT9 781 aa16.75■□□□□ 0.27
SF1-211ENST00000448404 POTEDQ86YR6 584 aa16.75■□□□□ 0.27
SF1-211ENST00000448404 PDCL2Q8N4E4 241 aa16.75■□□□□ 0.27
SF1-211ENST00000448404 G3V3G9 751 aa16.74■□□□□ 0.27
SF1-211ENST00000448404 APBA3O96018 575 aa16.74■□□□□ 0.27
SF1-211ENST00000448404 TFRCP02786 760 aaKnown RBP16.74■□□□□ 0.27
SF1-211ENST00000448404 SRGNP10124 158 aa16.74■□□□□ 0.27
SF1-211ENST00000448404 CHRNA5P30532 468 aa16.74■□□□□ 0.27
SF1-211ENST00000448404 NR1I3Q14994 352 aa16.74■□□□□ 0.27
SF1-211ENST00000448404 DCAF8Q5TAQ9 597 aa16.74■□□□□ 0.27
SF1-211ENST00000448404 TBCKQ8TEA7 893 aa16.74■□□□□ 0.27
SF1-211ENST00000448404 BAG1Q99933 345 aaPredicted RBP16.74■□□□□ 0.27
SF1-211ENST00000448404 DDX60LQ5H9U9 1706 aaKnown RBP16.74■□□□□ 0.27
SF1-211ENST00000448404 CALML3P27482 149 aa16.74■□□□□ 0.27
SF1-211ENST00000448404 RBM5P52756 815 aaKnown RBP eCLIP16.74■□□□□ 0.27
SF1-211ENST00000448404 KANK3Q6NY19 840 aa16.74■□□□□ 0.27
SF1-211ENST00000448404 REXO1L1PQ8IX06 675 aa16.74■□□□□ 0.27
SF1-211ENST00000448404 WDR24Q96S15 920 aa16.74■□□□□ 0.27
SF1-211ENST00000448404 ROBO3Q96MS0 1386 aa16.74■□□□□ 0.27
SF1-211ENST00000448404 UBR3Q6ZT12 1888 aa16.73■□□□□ 0.27
SF1-211ENST00000448404 TDP2O95551 362 aa16.73■□□□□ 0.27
SF1-211ENST00000448404 PDHBP11177 359 aa16.73■□□□□ 0.27
SF1-211ENST00000448404 TXKP42681 527 aa16.73■□□□□ 0.27
SF1-211ENST00000448404 SPATA1Q5VX52 437 aa16.73■□□□□ 0.27
SF1-211ENST00000448404 KIF18AQ8NI77 898 aa16.73■□□□□ 0.27
SF1-211ENST00000448404 NELFBQ8WX92 580 aa16.73■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 75.5 ms