RNA–Protein interactions for RNA: ENST00000447267.4

SDCBP-205, Transcript of syndecan binding protein, humanhuman

TSL 3 BASIC

Gene SDCBP, Length 772 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-205ENST00000447267 MKNK1Q9BUB5 465 aa6.94□□□□□ -1.3
SDCBP-205ENST00000447267 RTFDC1Q9BY42 306 aaPredicted RBP6.94□□□□□ -1.3
SDCBP-205ENST00000447267 DBNDD1Q9H9R9 158 aa6.94□□□□□ -1.3
SDCBP-205ENST00000447267 CXXC1Q9P0U4 656 aaPredicted RBP6.94□□□□□ -1.3
SDCBP-205ENST00000447267 WASHC2AQ641Q2 1341 aa6.94□□□□□ -1.3
SDCBP-205ENST00000447267 DYRK3O43781 588 aa6.93□□□□□ -1.3
SDCBP-205ENST00000447267 RGS9O75916 674 aaPredicted RBP6.93□□□□□ -1.3
SDCBP-205ENST00000447267 ELNP15502 786 aa6.93□□□□□ -1.3
SDCBP-205ENST00000447267 EPB42P16452 691 aa6.93□□□□□ -1.3
SDCBP-205ENST00000447267 PIP4K2AP48426 406 aaPredicted RBP6.93□□□□□ -1.3
SDCBP-205ENST00000447267 KCNQ1P51787 676 aa6.93□□□□□ -1.3
SDCBP-205ENST00000447267 UBXN2AP68543 259 aa6.93□□□□□ -1.3
SDCBP-205ENST00000447267 LACTBP83111 547 aaPredicted RBP6.93□□□□□ -1.3
SDCBP-205ENST00000447267 TFF2Q03403 129 aa6.93□□□□□ -1.3
SDCBP-205ENST00000447267 KIF22Q14807 665 aa6.93□□□□□ -1.3
SDCBP-205ENST00000447267 SHHQ15465 462 aa6.93□□□□□ -1.3
SDCBP-205ENST00000447267 TAF1CQ15572 869 aaPredicted RBP6.93□□□□□ -1.3
SDCBP-205ENST00000447267 CRY2Q49AN0 593 aa6.93□□□□□ -1.3
SDCBP-205ENST00000447267 DPP8Q6V1X1 898 aaPredicted RBP6.93□□□□□ -1.3
SDCBP-205ENST00000447267 CMTR1Q8N1G2 835 aaKnown RBP6.93□□□□□ -1.3
SDCBP-205ENST00000447267 SUPT20HQ8NEM7 779 aa6.93□□□□□ -1.3
SDCBP-205ENST00000447267 ZFYVE28Q9HCC9 887 aa6.93□□□□□ -1.3
SDCBP-205ENST00000447267 TERF2IPQ9NYB0 399 aa6.93□□□□□ -1.3
SDCBP-205ENST00000447267 NIP7Q9Y221 180 aaKnown RBP eCLIP6.93□□□□□ -1.3
SDCBP-205ENST00000447267 COL2A1P02458 1487 aaPredicted RBP6.92□□□□□ -1.3
SDCBP-205ENST00000447267 MMP20O60882 483 aa6.92□□□□□ -1.3
SDCBP-205ENST00000447267 XYLBO75191 536 aa6.92□□□□□ -1.3
SDCBP-205ENST00000447267 DEAF1O75398 565 aaPredicted RBP6.92□□□□□ -1.3
SDCBP-205ENST00000447267 ATG7O95352 703 aa6.92□□□□□ -1.3
SDCBP-205ENST00000447267 STARD3NLO95772 234 aa6.92□□□□□ -1.3
SDCBP-205ENST00000447267 HOXA10P31260 410 aaPredicted RBP6.92□□□□□ -1.3
SDCBP-205ENST00000447267 C9orf50Q5SZB4 431 aa6.92□□□□□ -1.3
SDCBP-205ENST00000447267 RBM17Q96I25 401 aaKnown RBP6.92□□□□□ -1.3
SDCBP-205ENST00000447267 SSBP4Q9BWG4 385 aaPredicted RBP6.92□□□□□ -1.3
SDCBP-205ENST00000447267 TLR7Q9NYK1 1049 aaKnown RBP6.92□□□□□ -1.3
SDCBP-205ENST00000447267 FRRS1LQ9P0K9 344 aa6.92□□□□□ -1.3
SDCBP-205ENST00000447267 SRRDQ9UH36 339 aa6.92□□□□□ -1.3
SDCBP-205ENST00000447267 FLT4P35916 1363 aa6.92□□□□□ -1.3
SDCBP-205ENST00000447267 BDP1A6H8Y1 2624 aa6.92□□□□□ -1.3
SDCBP-205ENST00000447267 NCAPD2Q15021 1401 aa6.92□□□□□ -1.3
SDCBP-205ENST00000447267 RIC1Q4ADV7 1423 aa6.92□□□□□ -1.3
SDCBP-205ENST00000447267 J3QW42 95 aa6.91□□□□□ -1.3
SDCBP-205ENST00000447267 ZBTB39O15060 712 aa6.91□□□□□ -1.3
SDCBP-205ENST00000447267 ZBTB48P10074 688 aaPredicted RBP6.91□□□□□ -1.3
SDCBP-205ENST00000447267 RPS12P25398 132 aaKnown RBP6.91□□□□□ -1.3
SDCBP-205ENST00000447267 ITGB8P26012 769 aa6.91□□□□□ -1.3
SDCBP-205ENST00000447267 NF2P35240 595 aa6.91□□□□□ -1.3
SDCBP-205ENST00000447267 NRLP54845 237 aa6.91□□□□□ -1.3
SDCBP-205ENST00000447267 NAA30Q147X3 362 aaPredicted RBP6.91□□□□□ -1.3
SDCBP-205ENST00000447267 PLEKHO1Q53GL0 409 aaPredicted RBP6.91□□□□□ -1.3
SDCBP-205ENST00000447267 LENG1Q96BZ8 264 aaPredicted RBP6.91□□□□□ -1.3
SDCBP-205ENST00000447267 SMG9Q9H0W8 520 aaKnown RBP6.91□□□□□ -1.3
SDCBP-205ENST00000447267 TMX4Q9H1E5 349 aaPredicted RBP6.91□□□□□ -1.3
SDCBP-205ENST00000447267 LGR6Q9HBX8 967 aa6.91□□□□□ -1.3
SDCBP-205ENST00000447267 ATP6V0A2Q9Y487 856 aa6.91□□□□□ -1.3
SDCBP-205ENST00000447267 KIF24Q5T7B8 1368 aa6.91□□□□□ -1.3
SDCBP-205ENST00000447267 RTL9Q8NET4 1388 aa6.91□□□□□ -1.3
SDCBP-205ENST00000447267 FYB1O15117 783 aa6.9□□□□□ -1.3
SDCBP-205ENST00000447267 IL6STP40189 918 aaPredicted RBP6.9□□□□□ -1.3
SDCBP-205ENST00000447267 PSMC4P43686 418 aa6.9□□□□□ -1.3
SDCBP-205ENST00000447267 PRMT2P55345 433 aa6.9□□□□□ -1.3
SDCBP-205ENST00000447267 NBPF9Q3BBW0 867 aa6.9□□□□□ -1.3
SDCBP-205ENST00000447267 C16orf46Q6P387 395 aa6.9□□□□□ -1.3
SDCBP-205ENST00000447267 ADAMTSL4Q6UY14 1074 aa6.9□□□□□ -1.3
SDCBP-205ENST00000447267 FAM43AQ8N2R8 423 aa6.9□□□□□ -1.3
SDCBP-205ENST00000447267 ZBTB38Q8NAP3 1195 aaPredicted RBP6.9□□□□□ -1.3
SDCBP-205ENST00000447267 TTC9Q92623 222 aa6.9□□□□□ -1.3
SDCBP-205ENST00000447267 NACC1Q96RE7 527 aa6.9□□□□□ -1.3
SDCBP-205ENST00000447267 CRAMP1Q96RY5 1269 aa6.9□□□□□ -1.3
SDCBP-205ENST00000447267 ZMYND15Q9H091 742 aa6.9□□□□□ -1.3
SDCBP-205ENST00000447267 ABCC12Q96J65 1359 aa6.9□□□□□ -1.31
SDCBP-205ENST00000447267 ZDBF2Q9HCK1 2354 aa6.9□□□□□ -1.31
SDCBP-205ENST00000447267 NCOR1O75376 2440 aa6.9□□□□□ -1.31
SDCBP-205ENST00000447267 UNC79Q9P2D8 2635 aa6.9□□□□□ -1.31
SDCBP-205ENST00000447267 ZFHX4Q86UP3 3567 aa6.89□□□□□ -1.31
SDCBP-205ENST00000447267 PRR33A8MZF0 331 aa6.89□□□□□ -1.31
SDCBP-205ENST00000447267 C9orf172C9J069 976 aa6.89□□□□□ -1.31
SDCBP-205ENST00000447267 PI4K2BG5E9Z4 385 aa6.89□□□□□ -1.31
SDCBP-205ENST00000447267 SCNN1AP37088 669 aa6.89□□□□□ -1.31
SDCBP-205ENST00000447267 RAC1P63000 192 aa6.89□□□□□ -1.31
SDCBP-205ENST00000447267 SMAD3P84022 425 aaKnown RBP6.89□□□□□ -1.31
SDCBP-205ENST00000447267 NRG1Q02297 640 aaPredicted RBP6.89□□□□□ -1.31
SDCBP-205ENST00000447267 C1orf141Q5JVX7 400 aa6.89□□□□□ -1.31
SDCBP-205ENST00000447267 ELMSAN1Q6PJG2 1045 aa6.89□□□□□ -1.31
SDCBP-205ENST00000447267 ERMP1Q7Z2K6 904 aa6.89□□□□□ -1.31
SDCBP-205ENST00000447267 NPM2Q86SE8 214 aaKnown RBP6.89□□□□□ -1.31
SDCBP-205ENST00000447267 BRI3BPQ8WY22 251 aa6.89□□□□□ -1.31
SDCBP-205ENST00000447267 NSUN5Q96P11 429 aaKnown RBP6.89□□□□□ -1.31
SDCBP-205ENST00000447267 C11orf49Q9H6J7 331 aa6.89□□□□□ -1.31
SDCBP-205ENST00000447267 SLC52A2Q9HAB3 445 aa6.89□□□□□ -1.31
SDCBP-205ENST00000447267 IGSF5Q9NSI5 407 aa6.89□□□□□ -1.31
SDCBP-205ENST00000447267 FAM205AQ6ZU69 1335 aa6.89□□□□□ -1.31
SDCBP-205ENST00000447267 KDM3BQ7LBC6 1761 aa6.89□□□□□ -1.31
SDCBP-205ENST00000447267 TCF20Q9UGU0 1960 aaKnown RBP6.88□□□□□ -1.31
SDCBP-205ENST00000447267 MYPNQ86TC9 1320 aa6.88□□□□□ -1.31
SDCBP-205ENST00000447267 MED19A0JLT2 244 aaPredicted RBP6.88□□□□□ -1.31
SDCBP-205ENST00000447267 ECE2O60344 883 aa6.88□□□□□ -1.31
SDCBP-205ENST00000447267 HOXD8P13378 290 aaPredicted RBP6.88□□□□□ -1.31
SDCBP-205ENST00000447267 ZNF280AP59817 542 aaPredicted RBP6.88□□□□□ -1.31
SDCBP-205ENST00000447267 PRKCZQ05513 592 aa6.88□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 56.9 ms