RNA–Protein interactions for RNA: ENST00000445265.6

TCOF1-206, Transcript of treacle ribosome biogenesis factor 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TCOF1, Length 4,825 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-206ENST00000445265 NEDD4P46934 1319 aa18.5■□□□□ 0.55
TCOF1-206ENST00000445265 USP27XA6NNY8 438 aa18.5■□□□□ 0.55
TCOF1-206ENST00000445265 GNA14O95837 355 aa18.5■□□□□ 0.55
TCOF1-206ENST00000445265 EIF6P56537 245 aaKnown RBP18.5■□□□□ 0.55
TCOF1-206ENST00000445265 KLHL30Q0D2K2 578 aa18.5■□□□□ 0.55
TCOF1-206ENST00000445265 C8orf37Q96NL8 207 aa18.5■□□□□ 0.55
TCOF1-206ENST00000445265 TUBGCP2Q9BSJ2 902 aa18.5■□□□□ 0.55
TCOF1-206ENST00000445265 DESP17661 470 aa18.49■□□□□ 0.55
TCOF1-206ENST00000445265 TCP1P17987 556 aaKnown RBP18.49■□□□□ 0.55
TCOF1-206ENST00000445265 KCNJ6P48051 423 aa18.49■□□□□ 0.55
TCOF1-206ENST00000445265 AK8Q96MA6 479 aa18.49■□□□□ 0.55
TCOF1-206ENST00000445265 DIP2BQ9P265 1576 aa18.49■□□□□ 0.55
TCOF1-206ENST00000445265 HLFQ16534 295 aa18.49■□□□□ 0.55
TCOF1-206ENST00000445265 B4GALNT4Q76KP1 1039 aa18.49■□□□□ 0.55
TCOF1-206ENST00000445265 EPSTI1Q96J88 318 aa18.49■□□□□ 0.55
TCOF1-206ENST00000445265 RIMBP2O15034 1052 aa18.49■□□□□ 0.55
TCOF1-206ENST00000445265 CALUO43852 315 aaPredicted RBP18.49■□□□□ 0.55
TCOF1-206ENST00000445265 TECP42680 631 aa18.49■□□□□ 0.55
TCOF1-206ENST00000445265 ZRSR2Q15696 482 aaKnown RBP18.49■□□□□ 0.55
TCOF1-206ENST00000445265 SOWAHDA6NJG2 315 aa18.49■□□□□ 0.55
TCOF1-206ENST00000445265 TOM1O60784 492 aa18.49■□□□□ 0.55
TCOF1-206ENST00000445265 DYNLL1P63167 89 aaKnown RBP18.49■□□□□ 0.55
TCOF1-206ENST00000445265 NAP1L3Q99457 506 aaPredicted RBP18.49■□□□□ 0.55
TCOF1-206ENST00000445265 BIN2Q9UBW5 565 aaPredicted RBP18.49■□□□□ 0.55
TCOF1-206ENST00000445265 HYOU1Q9Y4L1 999 aa18.49■□□□□ 0.55
TCOF1-206ENST00000445265 SEC31AO94979 1220 aaKnown RBP18.48■□□□□ 0.55
TCOF1-206ENST00000445265 CDC27P30260 824 aa18.48■□□□□ 0.55
TCOF1-206ENST00000445265 TRMT1LQ7Z2T5 733 aaKnown RBP18.48■□□□□ 0.55
TCOF1-206ENST00000445265 FAM71BQ8TC56 605 aa18.48■□□□□ 0.55
TCOF1-206ENST00000445265 NT5C2P49902 561 aa18.48■□□□□ 0.55
TCOF1-206ENST00000445265 MYOCDQ8IZQ8 938 aa18.48■□□□□ 0.55
TCOF1-206ENST00000445265 NSRP1Q9H0G5 558 aaKnown RBP18.48■□□□□ 0.55
TCOF1-206ENST00000445265 ARL6IP4Q66PJ3 421 aaKnown RBP18.48■□□□□ 0.55
TCOF1-206ENST00000445265 LRRC45Q96CN5 670 aa18.48■□□□□ 0.55
TCOF1-206ENST00000445265 PSMB7Q99436 277 aa18.48■□□□□ 0.55
TCOF1-206ENST00000445265 FUCA2Q9BTY2 467 aa18.48■□□□□ 0.55
TCOF1-206ENST00000445265 PARD6BQ9BYG5 372 aa18.48■□□□□ 0.55
TCOF1-206ENST00000445265 FRMD4BQ9Y2L6 1034 aa18.48■□□□□ 0.55
TCOF1-206ENST00000445265 PNMA6AP0CW24 399 aaPredicted RBP18.48■□□□□ 0.55
TCOF1-206ENST00000445265 DDX12PQ92771 950 aa18.48■□□□□ 0.55
TCOF1-206ENST00000445265 KDM3AQ9Y4C1 1321 aa18.48■□□□□ 0.55
TCOF1-206ENST00000445265 KIF28PB7ZC32 967 aa18.47■□□□□ 0.55
TCOF1-206ENST00000445265 NDUFAB1O14561 156 aa18.47■□□□□ 0.55
TCOF1-206ENST00000445265 SCARF1Q14162 830 aa18.47■□□□□ 0.55
TCOF1-206ENST00000445265 SHC4Q6S5L8 630 aa18.47■□□□□ 0.55
TCOF1-206ENST00000445265 CCDC121Q6ZUS5 278 aa18.47■□□□□ 0.55
TCOF1-206ENST00000445265 CCDC24Q8N4L8 307 aa18.47■□□□□ 0.55
TCOF1-206ENST00000445265 NLRC4Q9NPP4 1024 aa18.47■□□□□ 0.55
TCOF1-206ENST00000445265 UBN2Q6ZU65 1347 aa18.47■□□□□ 0.55
TCOF1-206ENST00000445265 MTRF1LQ9UGC7 380 aaKnown RBP18.47■□□□□ 0.55
TCOF1-206ENST00000445265 FLOT1O75955 427 aa18.47■□□□□ 0.55
TCOF1-206ENST00000445265 KAZALD1Q96I82 304 aa18.47■□□□□ 0.55
TCOF1-206ENST00000445265 DNM3Q9UQ16 869 aa18.47■□□□□ 0.55
TCOF1-206ENST00000445265 ZNF804BA4D1E1 1349 aa18.47■□□□□ 0.55
TCOF1-206ENST00000445265 CHGBP05060 677 aa18.47■□□□□ 0.55
TCOF1-206ENST00000445265 CNOT6LQ96LI5 555 aaKnown RBP18.47■□□□□ 0.55
TCOF1-206ENST00000445265 BRIP1Q9BX63 1249 aa18.47■□□□□ 0.55
TCOF1-206ENST00000445265 PDE11AQ9HCR9 933 aa18.47■□□□□ 0.55
TCOF1-206ENST00000445265 MFAP3LO75121 409 aa18.46■□□□□ 0.55
TCOF1-206ENST00000445265 PLA2G12BQ9BX93 195 aa18.46■□□□□ 0.55
TCOF1-206ENST00000445265 AK9Q5TCS8 1911 aa18.46■□□□□ 0.55
TCOF1-206ENST00000445265 RPS6KA1Q15418 735 aa18.46■□□□□ 0.55
TCOF1-206ENST00000445265 ARMCX5Q6P1M9 558 aa18.46■□□□□ 0.55
TCOF1-206ENST00000445265 EIF2AK3Q9NZJ5 1116 aaKnown RBP18.46■□□□□ 0.55
TCOF1-206ENST00000445265 CPDO75976 1380 aa18.46■□□□□ 0.55
TCOF1-206ENST00000445265 SLC1A4P43007 532 aa18.46■□□□□ 0.55
TCOF1-206ENST00000445265 CCZ1BP86790 482 aa18.46■□□□□ 0.55
TCOF1-206ENST00000445265 CCZ1P86791 482 aaPredicted RBP18.46■□□□□ 0.55
TCOF1-206ENST00000445265 NELFCDQ8IXH7 590 aa18.46■□□□□ 0.55
TCOF1-206ENST00000445265 EIF4ENIF1Q9NRA8 985 aaKnown RBP18.46■□□□□ 0.55
TCOF1-206ENST00000445265 TMEM232C9JQI7 657 aa18.46■□□□□ 0.54
TCOF1-206ENST00000445265 SUSD4Q5VX71 490 aa18.46■□□□□ 0.54
TCOF1-206ENST00000445265 ANKS4BQ8N8V4 417 aa18.46■□□□□ 0.54
TCOF1-206ENST00000445265 P2RX5Q93086 422 aa18.46■□□□□ 0.54
TCOF1-206ENST00000445265 ERCC3P19447 782 aa18.45■□□□□ 0.54
TCOF1-206ENST00000445265 NAA30Q147X3 362 aaPredicted RBP18.45■□□□□ 0.54
TCOF1-206ENST00000445265 UBLCP1Q8WVY7 318 aaPredicted RBP18.45■□□□□ 0.54
TCOF1-206ENST00000445265 ANKRD62A6NC57 917 aa18.45■□□□□ 0.54
TCOF1-206ENST00000445265 B4DLN1 442 aa18.45■□□□□ 0.54
TCOF1-206ENST00000445265 CTDNEP1O95476 244 aa18.45■□□□□ 0.54
TCOF1-206ENST00000445265 GOLGA8HP0CJ92 632 aa18.45■□□□□ 0.54
TCOF1-206ENST00000445265 TERF2Q15554 542 aa18.45■□□□□ 0.54
TCOF1-206ENST00000445265 CPLX4Q7Z7G2 160 aa18.45■□□□□ 0.54
TCOF1-206ENST00000445265 HOOK3Q86VS8 718 aa18.45■□□□□ 0.54
TCOF1-206ENST00000445265 ACRBPQ8NEB7 543 aa18.45■□□□□ 0.54
TCOF1-206ENST00000445265 TBC1D7Q9P0N9 293 aa18.45■□□□□ 0.54
TCOF1-206ENST00000445265 RIPOR2Q9Y4F9 1068 aa18.45■□□□□ 0.54
TCOF1-206ENST00000445265 OVOS2A0A0G2JMS6 1433 aa18.45■□□□□ 0.54
TCOF1-206ENST00000445265 COBLO75128 1261 aa18.44■□□□□ 0.54
TCOF1-206ENST00000445265 RNASE9P60153 205 aaKnown RBP18.44■□□□□ 0.54
TCOF1-206ENST00000445265 KMT5BQ4FZB7 885 aa18.44■□□□□ 0.54
TCOF1-206ENST00000445265 RBM43Q6ZSC3 357 aaKnown RBP18.44■□□□□ 0.54
TCOF1-206ENST00000445265 TMTC3Q6ZXV5 915 aa18.44■□□□□ 0.54
TCOF1-206ENST00000445265 GOLGA5Q8TBA6 731 aa18.44■□□□□ 0.54
TCOF1-206ENST00000445265 GDAP1L1Q96MZ0 367 aa18.44■□□□□ 0.54
TCOF1-206ENST00000445265 CCDC77Q9BR77 488 aa18.44■□□□□ 0.54
TCOF1-206ENST00000445265 SLC39A2Q9NP94 309 aa18.44■□□□□ 0.54
TCOF1-206ENST00000445265 MTUS1Q9ULD2 1270 aa18.44■□□□□ 0.54
TCOF1-206ENST00000445265 CEP104O60308 925 aa18.44■□□□□ 0.54
TCOF1-206ENST00000445265 MFSD14BQ5SR56 506 aa18.44■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 121.9 ms