RNA–Protein interactions for RNA: ENST00000433892.6

CD44-209, Transcript of CD44 molecule (Indian blood group), humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CD44, Length 2,292 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-209ENST00000433892 RASSF8Q8NHQ8 419 aa13.32□□□□□ -0.28
CD44-209ENST00000433892 SH3RF3Q8TEJ3 882 aaPredicted RBP13.32□□□□□ -0.28
CD44-209ENST00000433892 RABGGTAQ92696 567 aa13.32□□□□□ -0.28
CD44-209ENST00000433892 CCDC51Q96ER9 411 aa13.32□□□□□ -0.28
CD44-209ENST00000433892 PLIN2Q99541 437 aa13.32□□□□□ -0.28
CD44-209ENST00000433892 TMEM60Q9H2L4 133 aa13.32□□□□□ -0.28
CD44-209ENST00000433892 DISC1Q9NRI5 854 aa13.32□□□□□ -0.28
CD44-209ENST00000433892 PUF60Q9UHX1 559 aaKnown RBP13.32□□□□□ -0.28
CD44-209ENST00000433892 MAD2L2Q9UI95 211 aa13.32□□□□□ -0.28
CD44-209ENST00000433892 AHDC1Q5TGY3 1603 aaPredicted RBP13.32□□□□□ -0.28
CD44-209ENST00000433892 NRAPQ86VF7 1730 aa13.32□□□□□ -0.28
CD44-209ENST00000433892 CCDC194A0A1B0GVG4 234 aa13.32□□□□□ -0.28
CD44-209ENST00000433892 TRIM49BA6NDI0 452 aa13.32□□□□□ -0.28
CD44-209ENST00000433892 TBC1D8O95759 1140 aa13.32□□□□□ -0.28
CD44-209ENST00000433892 SPAG1Q07617 926 aa13.32□□□□□ -0.28
CD44-209ENST00000433892 SLC35G1Q2M3R5 365 aa13.32□□□□□ -0.28
CD44-209ENST00000433892 NAALADL2Q58DX5 795 aa13.32□□□□□ -0.28
CD44-209ENST00000433892 HEATR3Q7Z4Q2 680 aa13.32□□□□□ -0.28
CD44-209ENST00000433892 SLC44A5Q8NCS7 719 aa13.32□□□□□ -0.28
CD44-209ENST00000433892 ANKRD20A12PQ8NF67 263 aa13.32□□□□□ -0.28
CD44-209ENST00000433892 SH3GLB2Q9NR46 395 aa13.32□□□□□ -0.28
CD44-209ENST00000433892 MKRN1Q9UHC7 482 aaKnown RBP13.32□□□□□ -0.28
CD44-209ENST00000433892 NARFQ9UHQ1 456 aa13.32□□□□□ -0.28
CD44-209ENST00000433892 KIAA1551Q9HCM1 1747 aa13.31□□□□□ -0.28
CD44-209ENST00000433892 LAMB1P07942 1786 aa13.31□□□□□ -0.28
CD44-209ENST00000433892 ZPR1O75312 459 aa13.31□□□□□ -0.28
CD44-209ENST00000433892 FECHP22830 423 aa13.31□□□□□ -0.28
CD44-209ENST00000433892 TM4SF1P30408 202 aa13.31□□□□□ -0.28
CD44-209ENST00000433892 KRT9P35527 623 aa13.31□□□□□ -0.28
CD44-209ENST00000433892 CHMP4BP1P59074 171 aa13.31□□□□□ -0.28
CD44-209ENST00000433892 UBXN1Q04323 297 aa13.31□□□□□ -0.28
CD44-209ENST00000433892 DIXDC1Q155Q3 683 aa13.31□□□□□ -0.28
CD44-209ENST00000433892 INF2Q27J81 1249 aa13.31□□□□□ -0.28
CD44-209ENST00000433892 SPTY2D1Q68D10 685 aaPredicted RBP13.31□□□□□ -0.28
CD44-209ENST00000433892 WWC2Q6AWC2 1192 aa13.31□□□□□ -0.28
CD44-209ENST00000433892 TPTE2Q6XPS3 522 aa13.31□□□□□ -0.28
CD44-209ENST00000433892 TMTC1Q8IUR5 882 aa13.31□□□□□ -0.28
CD44-209ENST00000433892 PCDHA6Q9UN73 950 aa13.31□□□□□ -0.28
CD44-209ENST00000433892 PCDHA8Q9Y5H6 950 aa13.31□□□□□ -0.28
CD44-209ENST00000433892 CNTNAP4Q9C0A0 1308 aa13.31□□□□□ -0.28
CD44-209ENST00000433892 M0R2N6 131 aa13.3□□□□□ -0.28
CD44-209ENST00000433892 GNPATO15228 680 aa13.3□□□□□ -0.28
CD44-209ENST00000433892 CYTH3O43739 400 aa13.3□□□□□ -0.28
CD44-209ENST00000433892 TFRCP02786 760 aaKnown RBP13.3□□□□□ -0.28
CD44-209ENST00000433892 LDHBP07195 334 aaKnown RBP13.3□□□□□ -0.28
CD44-209ENST00000433892 TSPY3P0CV98 308 aa13.3□□□□□ -0.28
CD44-209ENST00000433892 TSPY8P0CW00 308 aa13.3□□□□□ -0.28
CD44-209ENST00000433892 PMS1P54277 932 aaKnown RBP13.3□□□□□ -0.28
CD44-209ENST00000433892 GRM4Q14833 912 aa13.3□□□□□ -0.28
CD44-209ENST00000433892 GRIK5Q16478 980 aa13.3□□□□□ -0.28
CD44-209ENST00000433892 KIF4BQ2VIQ3 1234 aa13.3□□□□□ -0.28
CD44-209ENST00000433892 SRGAP1Q7Z6B7 1085 aa13.3□□□□□ -0.28
CD44-209ENST00000433892 IRF2BP1Q8IU81 584 aa13.3□□□□□ -0.28
CD44-209ENST00000433892 SLC35F6Q8N357 371 aa13.3□□□□□ -0.28
CD44-209ENST00000433892 ARFGAP3Q9NP61 516 aa13.3□□□□□ -0.28
CD44-209ENST00000433892 ANKIB1Q9P2G1 1089 aa13.3□□□□□ -0.28
CD44-209ENST00000433892 CDC23Q9UJX2 597 aa13.3□□□□□ -0.28
CD44-209ENST00000433892 STX8Q9UNK0 236 aa13.3□□□□□ -0.28
CD44-209ENST00000433892 TTF2Q9UNY4 1162 aaKnown RBP13.3□□□□□ -0.28
CD44-209ENST00000433892 MYH8P13535 1937 aa13.3□□□□□ -0.28
CD44-209ENST00000433892 CTAGE9A4FU28 777 aa13.3□□□□□ -0.28
CD44-209ENST00000433892 PES1O00541 588 aaKnown RBP13.3□□□□□ -0.28
CD44-209ENST00000433892 POLR3GO15318 223 aaPredicted RBP13.3□□□□□ -0.28
CD44-209ENST00000433892 PARP1P09874 1014 aaKnown RBP13.3□□□□□ -0.28
CD44-209ENST00000433892 GOLGA8HP0CJ92 632 aa13.3□□□□□ -0.28
CD44-209ENST00000433892 UBA7P41226 1012 aa13.3□□□□□ -0.28
CD44-209ENST00000433892 CYP26C1Q6V0L0 522 aa13.3□□□□□ -0.28
CD44-209ENST00000433892 ADSSL1Q8N142 457 aa13.3□□□□□ -0.28
CD44-209ENST00000433892 TGFBRAP1Q8WUH2 860 aa13.3□□□□□ -0.28
CD44-209ENST00000433892 SLF1Q9BQI6 1058 aa13.3□□□□□ -0.28
CD44-209ENST00000433892 H7C1D1 291 aa13.29□□□□□ -0.28
CD44-209ENST00000433892 AMIGO3Q86WK7 504 aa13.29□□□□□ -0.28
CD44-209ENST00000433892 ZNF444Q8N0Y2 327 aaPredicted RBP13.29□□□□□ -0.28
CD44-209ENST00000433892 ANKS1AQ92625 1134 aa13.29□□□□□ -0.28
CD44-209ENST00000433892 CHP1Q99653 195 aa13.29□□□□□ -0.28
CD44-209ENST00000433892 CPVLQ9H3G5 476 aa13.29□□□□□ -0.28
CD44-209ENST00000433892 SAP30BPQ9UHR5 308 aaKnown RBP13.29□□□□□ -0.28
CD44-209ENST00000433892 IRS2Q9Y4H2 1338 aa13.29□□□□□ -0.28
CD44-209ENST00000433892 ATP8B1O43520 1251 aa13.29□□□□□ -0.28
CD44-209ENST00000433892 RPS6KA4O75676 772 aa13.29□□□□□ -0.28
CD44-209ENST00000433892 GNAQP50148 359 aa13.29□□□□□ -0.28
CD44-209ENST00000433892 EEF2KMTQ96G04 330 aa13.29□□□□□ -0.28
CD44-209ENST00000433892 BARHL2Q9NY43 387 aa13.29□□□□□ -0.28
CD44-209ENST00000433892 ERICH4A6NGS2 130 aa13.28□□□□□ -0.28
CD44-209ENST00000433892 STXBP3O00186 592 aa13.28□□□□□ -0.28
CD44-209ENST00000433892 ARHGAP25P42331 645 aa13.28□□□□□ -0.28
CD44-209ENST00000433892 TRIM14Q14142 442 aa13.28□□□□□ -0.28
CD44-209ENST00000433892 MAPKAPK5Q8IW41 473 aa13.28□□□□□ -0.28
CD44-209ENST00000433892 LRRC15Q8TF66 581 aa13.28□□□□□ -0.28
CD44-209ENST00000433892 GPR101Q96P66 508 aaPredicted RBP13.28□□□□□ -0.28
CD44-209ENST00000433892 TMEM47Q9BQJ4 181 aa13.28□□□□□ -0.28
CD44-209ENST00000433892 CCDC88AQ3V6T2 1871 aa13.28□□□□□ -0.28
CD44-209ENST00000433892 TTC26A0AVF1 554 aa13.28□□□□□ -0.28
CD44-209ENST00000433892 KLRC4O43908 158 aa13.28□□□□□ -0.28
CD44-209ENST00000433892 NFIXQ14938 502 aa13.28□□□□□ -0.28
CD44-209ENST00000433892 AMOTL1Q8IY63 956 aa13.28□□□□□ -0.28
CD44-209ENST00000433892 CEP112Q8N8E3 955 aa13.28□□□□□ -0.28
CD44-209ENST00000433892 CCDC148Q8NFR7 591 aa13.28□□□□□ -0.28
CD44-209ENST00000433892 WDR66Q8TBY9 1149 aa13.28□□□□□ -0.28
CD44-209ENST00000433892 FUT8Q9BYC5 575 aa13.28□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms