RNA–Protein interactions for RNA: ENST00000425718.1

APOE-202, Transcript of apolipoprotein E, humanhuman

TSL 1 (best)

Gene APOE, Length 923 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOE-202ENST00000425718 ZSCAN31Q96LW9 406 aaPredicted RBP28.04■■■□□ 2.08
APOE-202ENST00000425718 MAD2L2Q9UI95 211 aa28.04■■■□□ 2.08
APOE-202ENST00000425718 BRPF3Q9ULD4 1205 aa28.04■■■□□ 2.08
APOE-202ENST00000425718 COL11A1P12107 1806 aaPredicted RBP28.04■■■□□ 2.08
APOE-202ENST00000425718 FRMPD2Q68DX3 1309 aaPredicted RBP28.03■■■□□ 2.08
APOE-202ENST00000425718 KLRF2D3W0D1 207 aa28.03■■■□□ 2.08
APOE-202ENST00000425718 DHX16O60231 1041 aaKnown RBP28.03■■■□□ 2.08
APOE-202ENST00000425718 TLR2O60603 784 aa28.03■■■□□ 2.08
APOE-202ENST00000425718 SYDE2Q5VT97 1194 aa28.03■■■□□ 2.08
APOE-202ENST00000425718 CPLX2Q6PUV4 134 aaKnown RBP28.03■■■□□ 2.08
APOE-202ENST00000425718 GPCPD1Q9NPB8 672 aa28.03■■■□□ 2.08
APOE-202ENST00000425718 RNF186Q9NXI6 227 aa28.03■■■□□ 2.08
APOE-202ENST00000425718 LIMCH1Q9UPQ0 1083 aa28.03■■■□□ 2.08
APOE-202ENST00000425718 RABGAP1Q9Y3P9 1069 aa28.03■■■□□ 2.08
APOE-202ENST00000425718 A0A0G2JMZ2 1700 aa28.03■■■□□ 2.08
APOE-202ENST00000425718 BAZ2BQ9UIF8 2168 aaKnown RBP28.02■■■□□ 2.08
APOE-202ENST00000425718 SPDYE16A6NNV3 312 aaPredicted RBP28.02■■■□□ 2.08
APOE-202ENST00000425718 ZBED4O75132 1171 aa28.02■■■□□ 2.08
APOE-202ENST00000425718 P2RX7Q99572 595 aaKnown RBP28.02■■■□□ 2.08
APOE-202ENST00000425718 ADAMTS5Q9UNA0 930 aa28.02■■■□□ 2.08
APOE-202ENST00000425718 PDIA3P30101 505 aaKnown RBP28.01■■■□□ 2.07
APOE-202ENST00000425718 TRAF1Q13077 416 aa28.01■■■□□ 2.07
APOE-202ENST00000425718 KIFC2Q96AC6 838 aa28.01■■■□□ 2.07
APOE-202ENST00000425718 MYL10Q9BUA6 226 aa28.01■■■□□ 2.07
APOE-202ENST00000425718 SLKQ9H2G2 1235 aaPredicted RBP28.01■■■□□ 2.07
APOE-202ENST00000425718 SH2B1Q9NRF2 756 aaPredicted RBP28.01■■■□□ 2.07
APOE-202ENST00000425718 WBP1LQ9NX94 342 aa28.01■■■□□ 2.07
APOE-202ENST00000425718 CYP2C8P10632 490 aa28■■■□□ 2.07
APOE-202ENST00000425718 OAZ1P54368 228 aa28■■■□□ 2.07
APOE-202ENST00000425718 CRHR2Q13324 411 aa28■■■□□ 2.07
APOE-202ENST00000425718 NOM1Q5C9Z4 860 aaKnown RBP28■■■□□ 2.07
APOE-202ENST00000425718 SPZ1Q9BXG8 430 aa28■■■□□ 2.07
APOE-202ENST00000425718 TRPA1O75762 1119 aa27.99■■■□□ 2.07
APOE-202ENST00000425718 GOLGA8HP0CJ92 632 aa27.99■■■□□ 2.07
APOE-202ENST00000425718 COPB2P35606 906 aa27.99■■■□□ 2.07
APOE-202ENST00000425718 CCNA1P78396 465 aa27.99■■■□□ 2.07
APOE-202ENST00000425718 FAM110CQ1W6H9 321 aa27.99■■■□□ 2.07
APOE-202ENST00000425718 FBXO28Q9NVF7 368 aa27.99■■■□□ 2.07
APOE-202ENST00000425718 RBM27Q9P2N5 1060 aaKnown RBP27.99■■■□□ 2.07
APOE-202ENST00000425718 PRR12Q9ULL5 1215 aa27.99■■■□□ 2.07
APOE-202ENST00000425718 VWA5AO00534 786 aa27.98■■■□□ 2.07
APOE-202ENST00000425718 SAMD1Q6SPF0 538 aaPredicted RBP27.98■■■□□ 2.07
APOE-202ENST00000425718 ATG4CQ96DT6 458 aa27.98■■■□□ 2.07
APOE-202ENST00000425718 SLC38A10Q9HBR0 1119 aa27.98■■■□□ 2.07
APOE-202ENST00000425718 MORF4L1Q9UBU8 362 aa27.98■■■□□ 2.07
APOE-202ENST00000425718 ADGRA2Q96PE1 1338 aa27.97■■■□□ 2.07
APOE-202ENST00000425718 CPLX1O14810 134 aa27.97■■■□□ 2.07
APOE-202ENST00000425718 PFKFB2O60825 505 aa27.97■■■□□ 2.07
APOE-202ENST00000425718 CDKL5O76039 1030 aa27.97■■■□□ 2.07
APOE-202ENST00000425718 RXRAP19793 462 aa27.97■■■□□ 2.07
APOE-202ENST00000425718 TTBK2Q6IQ55 1244 aa27.97■■■□□ 2.07
APOE-202ENST00000425718 TMTC3Q6ZXV5 915 aa27.97■■■□□ 2.07
APOE-202ENST00000425718 RASGRP2Q7LDG7 609 aa27.97■■■□□ 2.07
APOE-202ENST00000425718 STAG2Q8N3U4 1231 aa27.97■■■□□ 2.07
APOE-202ENST00000425718 RIOX1Q9H6W3 641 aa27.97■■■□□ 2.07
APOE-202ENST00000425718 TPCN1Q9ULQ1 816 aa27.97■■■□□ 2.07
APOE-202ENST00000425718 ATP2A1O14983 1001 aa27.96■■■□□ 2.07
APOE-202ENST00000425718 CCDC144CPQ8IYA2 1237 aa27.96■■■□□ 2.07
APOE-202ENST00000425718 GPRC5AQ8NFJ5 357 aa27.96■■■□□ 2.07
APOE-202ENST00000425718 RANBP17Q9H2T7 1088 aaKnown RBP27.96■■■□□ 2.07
APOE-202ENST00000425718 HPS5Q9UPZ3 1129 aa27.96■■■□□ 2.07
APOE-202ENST00000425718 SLC16A2P36021 539 aa27.95■■■□□ 2.06
APOE-202ENST00000425718 C17orf99Q6UX52 265 aa27.95■■■□□ 2.06
APOE-202ENST00000425718 ADGRF4Q8IZF3 695 aa27.95■■■□□ 2.06
APOE-202ENST00000425718 RRP36Q96EU6 259 aaKnown RBP27.95■■■□□ 2.06
APOE-202ENST00000425718 UBA5Q9GZZ9 404 aa27.95■■■□□ 2.06
APOE-202ENST00000425718 SEC63Q9UGP8 760 aaKnown RBP27.95■■■□□ 2.06
APOE-202ENST00000425718 CEP350Q5VT06 3117 aa27.95■■■□□ 2.06
APOE-202ENST00000425718 SLC25A27O95847 323 aa27.94■■■□□ 2.06
APOE-202ENST00000425718 BCRP11274 1271 aa27.94■■■□□ 2.06
APOE-202ENST00000425718 ERVK-9P63128 1117 aa27.94■■■□□ 2.06
APOE-202ENST00000425718 ERVK-24P63145 666 aa27.94■■■□□ 2.06
APOE-202ENST00000425718 PAGR1Q9BTK6 254 aa27.94■■■□□ 2.06
APOE-202ENST00000425718 TEX13BQ9BXU2 312 aa27.94■■■□□ 2.06
APOE-202ENST00000425718 MGAMO43451 1857 aa27.93■■■□□ 2.06
APOE-202ENST00000425718 AKAP17AQ02040 695 aaKnown RBP27.93■■■□□ 2.06
APOE-202ENST00000425718 ARHGEF6Q15052 776 aa27.93■■■□□ 2.06
APOE-202ENST00000425718 TKFCQ3LXA3 575 aa27.93■■■□□ 2.06
APOE-202ENST00000425718 NOL8Q76FK4 1167 aaKnown RBP27.93■■■□□ 2.06
APOE-202ENST00000425718 RAB11FIP4Q86YS3 637 aa27.93■■■□□ 2.06
APOE-202ENST00000425718 CCAR1Q8IX12 1150 aaKnown RBP27.93■■■□□ 2.06
APOE-202ENST00000425718 ANKRD13CQ8N6S4 541 aa27.93■■■□□ 2.06
APOE-202ENST00000425718 RBPJLQ9UBG7 517 aa27.93■■■□□ 2.06
APOE-202ENST00000425718 TBC1D8O95759 1140 aa27.92■■■□□ 2.06
APOE-202ENST00000425718 IFNAR1P17181 557 aa27.92■■■□□ 2.06
APOE-202ENST00000425718 CCT2P78371 535 aaKnown RBP27.92■■■□□ 2.06
APOE-202ENST00000425718 KIF22Q14807 665 aa27.92■■■□□ 2.06
APOE-202ENST00000425718 ME3Q16798 604 aa27.92■■■□□ 2.06
APOE-202ENST00000425718 TRIM22Q8IYM9 498 aa27.92■■■□□ 2.06
APOE-202ENST00000425718 SHCBP1Q8NEM2 672 aa27.92■■■□□ 2.06
APOE-202ENST00000425718 GTF3C6Q969F1 213 aa27.92■■■□□ 2.06
APOE-202ENST00000425718 MTMR8Q96EF0 704 aa27.92■■■□□ 2.06
APOE-202ENST00000425718 SPATC1LQ9H0A9 340 aa27.92■■■□□ 2.06
APOE-202ENST00000425718 JMJD4Q9H9V9 463 aa27.92■■■□□ 2.06
APOE-202ENST00000425718 CPA4Q9UI42 421 aa27.92■■■□□ 2.06
APOE-202ENST00000425718 ZBTB5O15062 677 aa27.91■■■□□ 2.06
APOE-202ENST00000425718 PLEKHA8P1O95397 391 aa27.91■■■□□ 2.06
APOE-202ENST00000425718 ICAM1P05362 532 aa27.91■■■□□ 2.06
APOE-202ENST00000425718 CDC27P30260 824 aa27.91■■■□□ 2.06
APOE-202ENST00000425718 STAT3P40763 770 aa27.91■■■□□ 2.06
Retrieved 100 of 20,778 RNA–protein pairs in 50.8 ms