RNA–Protein interactions for RNA: ENST00000422933.5

HDLBP-209, Transcript of high density lipoprotein binding protein, humanhuman

TSL 3

Gene HDLBP, Length 929 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-209ENST00000422933 AK2P54819 239 aa11.6□□□□□ -0.55
HDLBP-209ENST00000422933 ZNF543Q08ER8 600 aa11.6□□□□□ -0.55
HDLBP-209ENST00000422933 GRM4Q14833 912 aa11.6□□□□□ -0.55
HDLBP-209ENST00000422933 TREML2Q5T2D2 321 aa11.6□□□□□ -0.55
HDLBP-209ENST00000422933 KCTD1Q719H9 257 aa11.6□□□□□ -0.55
HDLBP-209ENST00000422933 FANCBQ8NB91 859 aa11.6□□□□□ -0.55
HDLBP-209ENST00000422933 KIFC2Q96AC6 838 aa11.6□□□□□ -0.55
HDLBP-209ENST00000422933 ASCC2Q9H1I8 757 aaPredicted RBP11.6□□□□□ -0.55
HDLBP-209ENST00000422933 CWC22Q9HCG8 908 aaKnown RBP11.6□□□□□ -0.55
HDLBP-209ENST00000422933 SH2B1Q9NRF2 756 aaPredicted RBP11.6□□□□□ -0.55
HDLBP-209ENST00000422933 SEC63Q9UGP8 760 aaKnown RBP11.6□□□□□ -0.55
HDLBP-209ENST00000422933 PDE4DIPQ5VU43 2346 aa11.6□□□□□ -0.55
HDLBP-209ENST00000422933 FRMPD2Q68DX3 1309 aaPredicted RBP11.6□□□□□ -0.55
HDLBP-209ENST00000422933 SNHG28P0DPA3 235 aa11.59□□□□□ -0.55
HDLBP-209ENST00000422933 SMARCA1P28370 1054 aa11.59□□□□□ -0.55
HDLBP-209ENST00000422933 DSG3P32926 999 aa11.59□□□□□ -0.55
HDLBP-209ENST00000422933 CCNA1P78396 465 aa11.59□□□□□ -0.55
HDLBP-209ENST00000422933 TROAPQ12815 778 aa11.59□□□□□ -0.55
HDLBP-209ENST00000422933 TOB2Q14106 344 aaPredicted RBP11.59□□□□□ -0.55
HDLBP-209ENST00000422933 ARHGEF6Q15052 776 aa11.59□□□□□ -0.55
HDLBP-209ENST00000422933 SYDE2Q5VT97 1194 aa11.59□□□□□ -0.55
HDLBP-209ENST00000422933 GPAT2Q6NUI2 795 aa11.59□□□□□ -0.55
HDLBP-209ENST00000422933 NOL8Q76FK4 1167 aaKnown RBP11.59□□□□□ -0.55
HDLBP-209ENST00000422933 TRIM22Q8IYM9 498 aa11.59□□□□□ -0.55
HDLBP-209ENST00000422933 NUP88Q99567 741 aaPredicted RBP11.59□□□□□ -0.55
HDLBP-209ENST00000422933 RBM27Q9P2N5 1060 aaKnown RBP11.59□□□□□ -0.55
HDLBP-209ENST00000422933 GOLGA8HP0CJ92 632 aa11.58□□□□□ -0.56
HDLBP-209ENST00000422933 PDIA3P30101 505 aaKnown RBP11.58□□□□□ -0.56
HDLBP-209ENST00000422933 COPB2P35606 906 aa11.58□□□□□ -0.56
HDLBP-209ENST00000422933 EVCP57679 992 aa11.58□□□□□ -0.56
HDLBP-209ENST00000422933 HERVK_113P62684 666 aa11.58□□□□□ -0.56
HDLBP-209ENST00000422933 STK3Q13188 491 aa11.58□□□□□ -0.56
HDLBP-209ENST00000422933 KIF22Q14807 665 aa11.58□□□□□ -0.56
HDLBP-209ENST00000422933 HSCBQ8IWL3 235 aa11.58□□□□□ -0.56
HDLBP-209ENST00000422933 CCDC144CPQ8IYA2 1237 aa11.58□□□□□ -0.56
HDLBP-209ENST00000422933 FAM43AQ8N2R8 423 aa11.58□□□□□ -0.56
HDLBP-209ENST00000422933 PIAS4Q8N2W9 510 aaPredicted RBP11.58□□□□□ -0.56
HDLBP-209ENST00000422933 NKX2-3Q8TAU0 364 aa11.58□□□□□ -0.56
HDLBP-209ENST00000422933 RRP36Q96EU6 259 aaKnown RBP11.58□□□□□ -0.56
HDLBP-209ENST00000422933 P2RX7Q99572 595 aaKnown RBP11.58□□□□□ -0.56
HDLBP-209ENST00000422933 KIF2CQ99661 725 aa11.58□□□□□ -0.56
HDLBP-209ENST00000422933 MYL10Q9BUA6 226 aa11.58□□□□□ -0.56
HDLBP-209ENST00000422933 MCOLN1Q9GZU1 580 aa11.58□□□□□ -0.56
HDLBP-209ENST00000422933 GPHNQ9NQX3 736 aaPredicted RBP11.58□□□□□ -0.56
HDLBP-209ENST00000422933 SAGE1Q9NXZ1 904 aa11.58□□□□□ -0.56
HDLBP-209ENST00000422933 BRPF3Q9ULD4 1205 aa11.58□□□□□ -0.56
HDLBP-209ENST00000422933 PPP1R9AQ9ULJ8 1098 aa11.58□□□□□ -0.56
HDLBP-209ENST00000422933 MYH6P13533 1939 aa11.58□□□□□ -0.56
HDLBP-209ENST00000422933 PALM3A6NDB9 673 aaPredicted RBP11.57□□□□□ -0.56
HDLBP-209ENST00000422933 IGF2BP3O00425 579 aaKnown RBP eCLIP11.57□□□□□ -0.56
HDLBP-209ENST00000422933 TRPA1O75762 1119 aa11.57□□□□□ -0.56
HDLBP-209ENST00000422933 HSP90AA1P07900 732 aaKnown RBP11.57□□□□□ -0.56
HDLBP-209ENST00000422933 RXRAP19793 462 aa11.57□□□□□ -0.56
HDLBP-209ENST00000422933 CCT2P78371 535 aaKnown RBP11.57□□□□□ -0.56
HDLBP-209ENST00000422933 DGKZQ13574 1117 aa11.57□□□□□ -0.56
HDLBP-209ENST00000422933 MOGSQ13724 837 aa11.57□□□□□ -0.56
HDLBP-209ENST00000422933 BECN1Q14457 450 aa11.57□□□□□ -0.56
HDLBP-209ENST00000422933 PLS1Q14651 629 aa11.57□□□□□ -0.56
HDLBP-209ENST00000422933 BTNL9Q6UXG8 535 aa11.57□□□□□ -0.56
HDLBP-209ENST00000422933 PTPN18Q99952 460 aa11.57□□□□□ -0.56
HDLBP-209ENST00000422933 PAGR1Q9BTK6 254 aa11.57□□□□□ -0.56
HDLBP-209ENST00000422933 SENP2Q9HC62 589 aa11.57□□□□□ -0.56
HDLBP-209ENST00000422933 VAT1LQ9HCJ6 419 aa11.57□□□□□ -0.56
HDLBP-209ENST00000422933 DAXXQ9UER7 740 aaPredicted RBP11.57□□□□□ -0.56
HDLBP-209ENST00000422933 MAD2L2Q9UI95 211 aa11.57□□□□□ -0.56
HDLBP-209ENST00000422933 RABGAP1Q9Y3P9 1069 aa11.57□□□□□ -0.56
HDLBP-209ENST00000422933 KIF3AQ9Y496 699 aa11.57□□□□□ -0.56
HDLBP-209ENST00000422933 TLR2O60603 784 aa11.56□□□□□ -0.56
HDLBP-209ENST00000422933 PFKFB2O60825 505 aa11.56□□□□□ -0.56
HDLBP-209ENST00000422933 CYP2C8P10632 490 aa11.56□□□□□ -0.56
HDLBP-209ENST00000422933 SLC16A2P36021 539 aa11.56□□□□□ -0.56
HDLBP-209ENST00000422933 OAZ1P54368 228 aa11.56□□□□□ -0.56
HDLBP-209ENST00000422933 MLLT1Q03111 559 aaPredicted RBP11.56□□□□□ -0.56
HDLBP-209ENST00000422933 SSRP1Q08945 709 aaKnown RBP11.56□□□□□ -0.56
HDLBP-209ENST00000422933 KIAA1755Q5JYT7 1200 aa11.56□□□□□ -0.56
HDLBP-209ENST00000422933 LBX2Q6XYB7 198 aa11.56□□□□□ -0.56
HDLBP-209ENST00000422933 RAB11FIP4Q86YS3 637 aa11.56□□□□□ -0.56
HDLBP-209ENST00000422933 ADGRF4Q8IZF3 695 aa11.56□□□□□ -0.56
HDLBP-209ENST00000422933 GPRC5AQ8NFJ5 357 aa11.56□□□□□ -0.56
HDLBP-209ENST00000422933 WASF1Q92558 559 aa11.56□□□□□ -0.56
HDLBP-209ENST00000422933 SPZ1Q9BXG8 430 aa11.56□□□□□ -0.56
HDLBP-209ENST00000422933 UBA5Q9GZZ9 404 aa11.56□□□□□ -0.56
HDLBP-209ENST00000422933 RNF186Q9NXI6 227 aa11.56□□□□□ -0.56
HDLBP-209ENST00000422933 PRR12Q9ULL5 1215 aa11.56□□□□□ -0.56
HDLBP-209ENST00000422933 SPDYE16A6NNV3 312 aaPredicted RBP11.55□□□□□ -0.56
HDLBP-209ENST00000422933 VWA5AO00534 786 aa11.55□□□□□ -0.56
HDLBP-209ENST00000422933 SLC25A27O95847 323 aa11.55□□□□□ -0.56
HDLBP-209ENST00000422933 XBP1P17861 261 aa11.55□□□□□ -0.56
HDLBP-209ENST00000422933 STAT3P40763 770 aa11.55□□□□□ -0.56
HDLBP-209ENST00000422933 SLC4A3P48751 1232 aa11.55□□□□□ -0.56
HDLBP-209ENST00000422933 CRHR2Q13324 411 aa11.55□□□□□ -0.56
HDLBP-209ENST00000422933 TKFCQ3LXA3 575 aa11.55□□□□□ -0.56
HDLBP-209ENST00000422933 TTBK2Q6IQ55 1244 aa11.55□□□□□ -0.56
HDLBP-209ENST00000422933 TMTC3Q6ZXV5 915 aa11.55□□□□□ -0.56
HDLBP-209ENST00000422933 CPXCR1Q8N123 301 aa11.55□□□□□ -0.56
HDLBP-209ENST00000422933 STAG2Q8N3U4 1231 aa11.55□□□□□ -0.56
HDLBP-209ENST00000422933 CCDC82Q8N4S0 544 aa11.55□□□□□ -0.56
HDLBP-209ENST00000422933 ATG4CQ96DT6 458 aa11.55□□□□□ -0.56
HDLBP-209ENST00000422933 LARP6Q9BRS8 491 aaKnown RBP11.55□□□□□ -0.56
HDLBP-209ENST00000422933 TEX13BQ9BXU2 312 aa11.55□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 53.1 ms