RNA–Protein interactions for RNA: ENST00000420692.6

CTSB-203, Transcript of cathepsin B, humanhuman

TSL 2

Gene CTSB, Length 2,230 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSB-203ENST00000420692 QTRT2Q9H974 415 aaKnown RBP18.34■□□□□ 0.53
CTSB-203ENST00000420692 ADKP55263 362 aaKnown RBP18.34■□□□□ 0.53
CTSB-203ENST00000420692 GTF2IP78347 998 aa18.34■□□□□ 0.53
CTSB-203ENST00000420692 KARSQ15046 597 aaKnown RBP18.34■□□□□ 0.53
CTSB-203ENST00000420692 KIF18AQ8NI77 898 aa18.34■□□□□ 0.53
CTSB-203ENST00000420692 SYNRGQ9UMZ2 1314 aa18.33■□□□□ 0.53
CTSB-203ENST00000420692 GTPBP6O43824 516 aaPredicted RBP18.33■□□□□ 0.53
CTSB-203ENST00000420692 PLCG2P16885 1265 aa18.33■□□□□ 0.53
CTSB-203ENST00000420692 SYCP1Q15431 976 aa18.33■□□□□ 0.53
CTSB-203ENST00000420692 TRIM65Q6PJ69 517 aa18.33■□□□□ 0.53
CTSB-203ENST00000420692 CERS5Q8N5B7 392 aa18.33■□□□□ 0.53
CTSB-203ENST00000420692 CCDC34Q96HJ3 373 aa18.33■□□□□ 0.53
CTSB-203ENST00000420692 ARID3AQ99856 593 aa18.33■□□□□ 0.53
CTSB-203ENST00000420692 ZNF215Q9UL58 517 aaPredicted RBP18.33■□□□□ 0.53
CTSB-203ENST00000420692 CCDC194A0A1B0GVG4 234 aa18.33■□□□□ 0.52
CTSB-203ENST00000420692 RIMBP2O15034 1052 aa18.33■□□□□ 0.52
CTSB-203ENST00000420692 PBX1P40424 430 aa18.33■□□□□ 0.52
CTSB-203ENST00000420692 SYT10Q6XYQ8 523 aa18.33■□□□□ 0.52
CTSB-203ENST00000420692 SP8Q8IXZ3 490 aa18.33■□□□□ 0.52
CTSB-203ENST00000420692 TBC1D22AQ8WUA7 517 aa18.33■□□□□ 0.52
CTSB-203ENST00000420692 LZTS2Q9BRK4 669 aa18.33■□□□□ 0.52
CTSB-203ENST00000420692 ZMYND12Q9H0C1 365 aa18.33■□□□□ 0.52
CTSB-203ENST00000420692 ADD3Q9UEY8 706 aaKnown RBP18.33■□□□□ 0.52
CTSB-203ENST00000420692 GALNT17Q6IS24 598 aa18.32■□□□□ 0.52
CTSB-203ENST00000420692 ZNF287Q9HBT7 754 aa18.32■□□□□ 0.52
CTSB-203ENST00000420692 USP17L5A8MUK1 530 aa18.31■□□□□ 0.52
CTSB-203ENST00000420692 KIF2AO00139 706 aaPredicted RBP18.31■□□□□ 0.52
CTSB-203ENST00000420692 PPEF1O14829 653 aaPredicted RBP18.31■□□□□ 0.52
CTSB-203ENST00000420692 CCDC148Q8NFR7 591 aa18.31■□□□□ 0.52
CTSB-203ENST00000420692 MXD3Q9BW11 206 aa18.31■□□□□ 0.52
CTSB-203ENST00000420692 PARP1P09874 1014 aaKnown RBP18.31■□□□□ 0.52
CTSB-203ENST00000420692 GABPAQ06546 454 aa18.31■□□□□ 0.52
CTSB-203ENST00000420692 L2HGDHQ9H9P8 463 aa18.31■□□□□ 0.52
CTSB-203ENST00000420692 DDX4Q9NQI0 724 aaKnown RBP18.31■□□□□ 0.52
CTSB-203ENST00000420692 CTNND2Q9UQB3 1225 aa18.31■□□□□ 0.52
CTSB-203ENST00000420692 ATP6V0A2Q9Y487 856 aa18.31■□□□□ 0.52
CTSB-203ENST00000420692 TXNRD1Q16881 649 aa18.3■□□□□ 0.52
CTSB-203ENST00000420692 CCDC93Q567U6 631 aa18.3■□□□□ 0.52
CTSB-203ENST00000420692 DTHD1Q6ZMT9 781 aa18.3■□□□□ 0.52
CTSB-203ENST00000420692 BAG1Q99933 345 aaPredicted RBP18.3■□□□□ 0.52
CTSB-203ENST00000420692 DISC1Q9NRI5 854 aa18.3■□□□□ 0.52
CTSB-203ENST00000420692 ARHGAP6O43182 974 aa18.3■□□□□ 0.52
CTSB-203ENST00000420692 NRDCO43847 1150 aa18.3■□□□□ 0.52
CTSB-203ENST00000420692 RPN1P04843 607 aaKnown RBP18.3■□□□□ 0.52
CTSB-203ENST00000420692 RRAGBQ5VZM2 374 aa18.3■□□□□ 0.52
CTSB-203ENST00000420692 HOMER1Q86YM7 354 aa18.3■□□□□ 0.52
CTSB-203ENST00000420692 PIGSQ96S52 555 aa18.3■□□□□ 0.52
CTSB-203ENST00000420692 UBA5Q9GZZ9 404 aa18.3■□□□□ 0.52
CTSB-203ENST00000420692 VAT1LQ9HCJ6 419 aa18.3■□□□□ 0.52
CTSB-203ENST00000420692 ADAMTSL1Q8N6G6 1762 aa18.29■□□□□ 0.52
CTSB-203ENST00000420692 F8W031 263 aaPredicted RBP18.29■□□□□ 0.52
CTSB-203ENST00000420692 ETF1P62495 437 aaKnown RBP18.29■□□□□ 0.52
CTSB-203ENST00000420692 TOGARAM2Q6ZUX3 1019 aa18.29■□□□□ 0.52
CTSB-203ENST00000420692 KRT27Q7Z3Y8 459 aa18.29■□□□□ 0.52
CTSB-203ENST00000420692 SLF2Q8IX21 1173 aa18.29■□□□□ 0.52
CTSB-203ENST00000420692 PDCL2Q8N4E4 241 aa18.29■□□□□ 0.52
CTSB-203ENST00000420692 LRRN4CLQ8ND94 238 aa18.29■□□□□ 0.52
CTSB-203ENST00000420692 PYM1Q9BRP8 204 aaKnown RBP18.29■□□□□ 0.52
CTSB-203ENST00000420692 CCDC94Q9BW85 323 aaPredicted RBP18.29■□□□□ 0.52
CTSB-203ENST00000420692 GDAQ9Y2T3 454 aa18.29■□□□□ 0.52
CTSB-203ENST00000420692 SMCO2A6NFE2 343 aa18.29■□□□□ 0.52
CTSB-203ENST00000420692 STAT6P42226 847 aa18.29■□□□□ 0.52
CTSB-203ENST00000420692 NAPAP54920 295 aa18.29■□□□□ 0.52
CTSB-203ENST00000420692 FCHSD1Q86WN1 690 aa18.29■□□□□ 0.52
CTSB-203ENST00000420692 CLEC10AQ8IUN9 316 aa18.29■□□□□ 0.52
CTSB-203ENST00000420692 NOL12Q9UGY1 213 aaKnown RBP eCLIP18.29■□□□□ 0.525e-7■□□□□ 11.3
CTSB-203ENST00000420692 PPP2R2CQ9Y2T4 447 aa18.29■□□□□ 0.52
CTSB-203ENST00000420692 V9GYY5 206 aaPredicted RBP18.29■□□□□ 0.52
CTSB-203ENST00000420692 IGKV6D-41A0A0C4DH26 115 aa18.28■□□□□ 0.52
CTSB-203ENST00000420692 KLRC4O43908 158 aa18.28■□□□□ 0.52
CTSB-203ENST00000420692 STX10O60499 249 aa18.28■□□□□ 0.52
CTSB-203ENST00000420692 SRGNP10124 158 aa18.28■□□□□ 0.52
CTSB-203ENST00000420692 PDHBP11177 359 aa18.28■□□□□ 0.52
CTSB-203ENST00000420692 AKR1B1P15121 316 aa18.28■□□□□ 0.52
CTSB-203ENST00000420692 SMARCA1P28370 1054 aa18.28■□□□□ 0.52
CTSB-203ENST00000420692 PICALMQ13492 652 aa18.28■□□□□ 0.52
CTSB-203ENST00000420692 ZNF658Q5TYW1 1059 aaPredicted RBP18.28■□□□□ 0.52
CTSB-203ENST00000420692 FAM177A1Q8N128 213 aaPredicted RBP18.28■□□□□ 0.52
CTSB-203ENST00000420692 PLIN2Q99541 437 aa18.28■□□□□ 0.52
CTSB-203ENST00000420692 CCSER1Q9C0I3 900 aa18.28■□□□□ 0.52
CTSB-203ENST00000420692 COA1Q9GZY4 146 aa18.28■□□□□ 0.52
CTSB-203ENST00000420692 RIOX1Q9H6W3 641 aa18.28■□□□□ 0.52
CTSB-203ENST00000420692 MTMR4Q9NYA4 1195 aa18.28■□□□□ 0.52
CTSB-203ENST00000420692 PLIN4Q96Q06 1357 aa18.28■□□□□ 0.52
CTSB-203ENST00000420692 QSER1Q2KHR3 1735 aa18.28■□□□□ 0.52
CTSB-203ENST00000420692 LRRC10BA6NIK2 292 aa18.27■□□□□ 0.52
CTSB-203ENST00000420692 EDIL3O43854 480 aa18.27■□□□□ 0.52
CTSB-203ENST00000420692 PRCPP42785 496 aa18.27■□□□□ 0.52
CTSB-203ENST00000420692 RBL2Q08999 1139 aa18.27■□□□□ 0.52
CTSB-203ENST00000420692 PPP4R3BQ5MIZ7 849 aa18.27■□□□□ 0.52
CTSB-203ENST00000420692 RWDD2AQ9UIY3 292 aa18.27■□□□□ 0.52
CTSB-203ENST00000420692 MAPK8IP1Q9UQF2 711 aa18.27■□□□□ 0.52
CTSB-203ENST00000420692 NRXN2Q9P2S2 1712 aa18.27■□□□□ 0.52
CTSB-203ENST00000420692 SLURP2P0DP57 97 aa18.27■□□□□ 0.52
CTSB-203ENST00000420692 PRPHP41219 470 aa18.27■□□□□ 0.52
CTSB-203ENST00000420692 MTF1Q14872 753 aa18.27■□□□□ 0.52
CTSB-203ENST00000420692 KRT31Q15323 416 aa18.27■□□□□ 0.52
CTSB-203ENST00000420692 TMC4Q7Z404 712 aa18.27■□□□□ 0.52
CTSB-203ENST00000420692 RRP36Q96EU6 259 aaKnown RBP18.27■□□□□ 0.52
CTSB-203ENST00000420692 LIMA1Q9UHB6 759 aaKnown RBP18.27■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms