RNA–Protein interactions for RNA: ENST00000415472.6

RBM28-202, Transcript of RNA binding motif protein 28, humanhuman

TSL 2 BASIC

Gene RBM28, Length 2,251 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM28-202ENST00000415472 PRCPP42785 496 aa13.2□□□□□ -0.3
RBM28-202ENST00000415472 PPFIBP1Q86W92 1011 aa13.2□□□□□ -0.3
RBM28-202ENST00000415472 CCDC34Q96HJ3 373 aa13.2□□□□□ -0.3
RBM28-202ENST00000415472 TMEM47Q9BQJ4 181 aa13.2□□□□□ -0.3
RBM28-202ENST00000415472 STX8Q9UNK0 236 aa13.2□□□□□ -0.3
RBM28-202ENST00000415472 MRFAP1Q9Y605 127 aa13.2□□□□□ -0.3
RBM28-202ENST00000415472 STXBP3O00186 592 aa13.19□□□□□ -0.3
RBM28-202ENST00000415472 TSPY3P0CV98 308 aa13.19□□□□□ -0.3
RBM28-202ENST00000415472 TSPY8P0CW00 308 aa13.19□□□□□ -0.3
RBM28-202ENST00000415472 RASA1P20936 1047 aa13.19□□□□□ -0.3
RBM28-202ENST00000415472 CT47A1Q5JQC4 288 aaPredicted RBP13.19□□□□□ -0.3
RBM28-202ENST00000415472 UTP14CQ5TAP6 766 aaKnown RBP13.19□□□□□ -0.3
RBM28-202ENST00000415472 IRF2BP1Q8IU81 584 aa13.19□□□□□ -0.3
RBM28-202ENST00000415472 ANKS1AQ92625 1134 aa13.19□□□□□ -0.3
RBM28-202ENST00000415472 PKNOX2Q96KN3 472 aa13.19□□□□□ -0.3
RBM28-202ENST00000415472 SEC31AO94979 1220 aaKnown RBP13.19□□□□□ -0.3
RBM28-202ENST00000415472 CALML3P27482 149 aa13.19□□□□□ -0.3
RBM28-202ENST00000415472 STAT6P42226 847 aa13.19□□□□□ -0.3
RBM28-202ENST00000415472 ERVK-24P63145 666 aa13.19□□□□□ -0.3
RBM28-202ENST00000415472 PAK1Q13153 545 aa13.19□□□□□ -0.3
RBM28-202ENST00000415472 SPTY2D1Q68D10 685 aaPredicted RBP13.19□□□□□ -0.3
RBM28-202ENST00000415472 KRT222Q8N1A0 295 aa13.19□□□□□ -0.3
RBM28-202ENST00000415472 ACRBPQ8NEB7 543 aa13.19□□□□□ -0.3
RBM28-202ENST00000415472 LIMA1Q9UHB6 759 aaKnown RBP13.19□□□□□ -0.3
RBM28-202ENST00000415472 RWDD2AQ9UIY3 292 aa13.19□□□□□ -0.3
RBM28-202ENST00000415472 N4BP3O15049 544 aa13.18□□□□□ -0.3
RBM28-202ENST00000415472 RGL2O15211 777 aa13.18□□□□□ -0.3
RBM28-202ENST00000415472 CCDC175P0C221 793 aa13.18□□□□□ -0.3
RBM28-202ENST00000415472 LONP1P36776 959 aaKnown RBP13.18□□□□□ -0.3
RBM28-202ENST00000415472 COPB1P53618 953 aaKnown RBP13.18□□□□□ -0.3
RBM28-202ENST00000415472 GRAPQ13588 217 aa13.18□□□□□ -0.3
RBM28-202ENST00000415472 VPS72Q15906 364 aa13.18□□□□□ -0.3
RBM28-202ENST00000415472 ZNF658Q5TYW1 1059 aaPredicted RBP13.18□□□□□ -0.3
RBM28-202ENST00000415472 ARL6IP4Q66PJ3 421 aaKnown RBP13.18□□□□□ -0.3
RBM28-202ENST00000415472 GRAPLQ8TC17 118 aaPredicted RBP13.18□□□□□ -0.3
RBM28-202ENST00000415472 EEF2KMTQ96G04 330 aa13.18□□□□□ -0.3
RBM28-202ENST00000415472 RTFDC1Q9BY42 306 aaPredicted RBP13.18□□□□□ -0.3
RBM28-202ENST00000415472 GTPBP4Q9BZE4 634 aaKnown RBP13.18□□□□□ -0.3
RBM28-202ENST00000415472 DISC1Q9NRI5 854 aa13.18□□□□□ -0.3
RBM28-202ENST00000415472 ROBO3Q96MS0 1386 aa13.18□□□□□ -0.3
RBM28-202ENST00000415472 CDK5RAP2Q96SN8 1893 aa13.18□□□□□ -0.3
RBM28-202ENST00000415472 CCDC194A0A1B0GVG4 234 aa13.18□□□□□ -0.3
RBM28-202ENST00000415472 PALM3A6NDB9 673 aaPredicted RBP13.18□□□□□ -0.3
RBM28-202ENST00000415472 LRRC10BA6NIK2 292 aa13.18□□□□□ -0.3
RBM28-202ENST00000415472 KCNJ18B7U540 433 aa13.18□□□□□ -0.3
RBM28-202ENST00000415472 GPSM2P81274 684 aa13.18□□□□□ -0.3
RBM28-202ENST00000415472 PPP2R3AQ06190 1150 aa13.18□□□□□ -0.3
RBM28-202ENST00000415472 KCNJ12Q14500 433 aa13.18□□□□□ -0.3
RBM28-202ENST00000415472 TCP11X2Q5H9J9 407 aa13.18□□□□□ -0.3
RBM28-202ENST00000415472 WDR66Q8TBY9 1149 aa13.18□□□□□ -0.3
RBM28-202ENST00000415472 CCDC12Q8WUD4 166 aaPredicted RBP13.18□□□□□ -0.3
RBM28-202ENST00000415472 CTAGE1Q96RT6 745 aa13.18□□□□□ -0.3
RBM28-202ENST00000415472 ZSWIM4Q9H7M6 989 aa13.18□□□□□ -0.3
RBM28-202ENST00000415472 SH3GLB2Q9NR46 395 aa13.18□□□□□ -0.3
RBM28-202ENST00000415472 NAV1Q8NEY1 1877 aa13.17□□□□□ -0.3
RBM28-202ENST00000415472 GOLGA6L9A6NEM1 432 aa13.17□□□□□ -0.3
RBM28-202ENST00000415472 EFCAB8A8MWE9 144 aa13.17□□□□□ -0.3
RBM28-202ENST00000415472 ZRANB2O95218 330 aaKnown RBP eCLIP13.17□□□□□ -0.3
RBM28-202ENST00000415472 PNMA6AP0CW24 399 aaPredicted RBP13.17□□□□□ -0.3
RBM28-202ENST00000415472 BARHL2Q9NY43 387 aa13.17□□□□□ -0.3
RBM28-202ENST00000415472 SNED1Q8TER0 1413 aa13.17□□□□□ -0.3
RBM28-202ENST00000415472 KLRF2D3W0D1 207 aa13.16□□□□□ -0.3
RBM28-202ENST00000415472 KLRC4O43908 158 aa13.16□□□□□ -0.3
RBM28-202ENST00000415472 RFC4P35249 363 aa13.16□□□□□ -0.3
RBM28-202ENST00000415472 BTDP43251 543 aa13.16□□□□□ -0.3
RBM28-202ENST00000415472 PPP4CP60510 307 aa13.16□□□□□ -0.3
RBM28-202ENST00000415472 FILIP1LQ4L180 1135 aa13.16□□□□□ -0.3
RBM28-202ENST00000415472 TEX35Q5T0J7 233 aa13.16□□□□□ -0.3
RBM28-202ENST00000415472 USP17L2Q6R6M4 530 aa13.16□□□□□ -0.3
RBM28-202ENST00000415472 DTHD1Q6ZMT9 781 aa13.16□□□□□ -0.3
RBM28-202ENST00000415472 FAM196AQ6ZSG2 479 aa13.16□□□□□ -0.3
RBM28-202ENST00000415472 RSRC2Q7L4I2 434 aaKnown RBP13.16□□□□□ -0.3
RBM28-202ENST00000415472 ZNF444Q8N0Y2 327 aaPredicted RBP13.16□□□□□ -0.3
RBM28-202ENST00000415472 SRRTQ9BXP5 876 aaKnown RBP13.16□□□□□ -0.3
RBM28-202ENST00000415472 PLA2G4AP47712 749 aa13.16□□□□□ -0.3
RBM28-202ENST00000415472 ADSSL1Q8N142 457 aa13.16□□□□□ -0.3
RBM28-202ENST00000415472 ABHD10Q9NUJ1 306 aa13.16□□□□□ -0.3
RBM28-202ENST00000415472 LEMD3Q9Y2U8 911 aa13.16□□□□□ -0.3
RBM28-202ENST00000415472 DDX60LQ5H9U9 1706 aaKnown RBP13.16□□□□□ -0.3
RBM28-202ENST00000415472 TAF1LQ8IZX4 1826 aa13.16□□□□□ -0.3
RBM28-202ENST00000415472 NKRFO15226 690 aaKnown RBP eCLIP13.15□□□□□ -0.3
RBM28-202ENST00000415472 FECHP22830 423 aa13.15□□□□□ -0.3
RBM28-202ENST00000415472 CDK8P49336 464 aa13.15□□□□□ -0.3
RBM28-202ENST00000415472 CNBD1Q8NA66 436 aa13.15□□□□□ -0.3
RBM28-202ENST00000415472 RASSF8Q8NHQ8 419 aa13.15□□□□□ -0.3
RBM28-202ENST00000415472 CHP1Q99653 195 aa13.15□□□□□ -0.3
RBM28-202ENST00000415472 VAT1LQ9HCJ6 419 aa13.15□□□□□ -0.3
RBM28-202ENST00000415472 ITIH6Q6UXX5 1313 aa13.15□□□□□ -0.3
RBM28-202ENST00000415472 SASH3O75995 380 aa13.15□□□□□ -0.3
RBM28-202ENST00000415472 BAG3O95817 575 aa13.15□□□□□ -0.3
RBM28-202ENST00000415472 PARP1P09874 1014 aaKnown RBP13.15□□□□□ -0.3
RBM28-202ENST00000415472 FLT1P17948 1338 aa13.15□□□□□ -0.3
RBM28-202ENST00000415472 ZNF569Q5MCW4 686 aa13.15□□□□□ -0.3
RBM28-202ENST00000415472 PRR5LQ6MZQ0 368 aa13.15□□□□□ -0.3
RBM28-202ENST00000415472 DAGLBQ8NCG7 672 aa13.15□□□□□ -0.3
RBM28-202ENST00000415472 EYA3Q99504 573 aa13.15□□□□□ -0.3
RBM28-202ENST00000415472 CD209Q9NNX6 404 aa13.15□□□□□ -0.3
RBM28-202ENST00000415472 LRRC4BQ9NT99 713 aa13.15□□□□□ -0.3
RBM28-202ENST00000415472 TCP11L1Q9NUJ3 509 aa13.15□□□□□ -0.3
RBM28-202ENST00000415472 UFL1O94874 794 aa13.14□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms