RNA–Protein interactions for RNA: ENST00000396545.4

TNFSF13-205, Transcript of TNF superfamily member 13, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene TNFSF13, Length 1,593 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF13-205ENST00000396545 NPLOC4Q8TAT6 608 aa20.46■□□□□ 0.87
TNFSF13-205ENST00000396545 LPAR1Q92633 364 aa20.46■□□□□ 0.87
TNFSF13-205ENST00000396545 SMIM22K7EJ46 135 aa20.45■□□□□ 0.86
TNFSF13-205ENST00000396545 CPA1P15085 419 aa20.45■□□□□ 0.86
TNFSF13-205ENST00000396545 AKR1B1P15121 316 aa20.45■□□□□ 0.86
TNFSF13-205ENST00000396545 MAGEA10P43363 369 aaPredicted RBP20.45■□□□□ 0.86
TNFSF13-205ENST00000396545 GSE1Q14687 1217 aa20.45■□□□□ 0.86
TNFSF13-205ENST00000396545 C12orf60Q5U649 245 aa20.45■□□□□ 0.86
TNFSF13-205ENST00000396545 NOL8Q76FK4 1167 aaKnown RBP20.45■□□□□ 0.86
TNFSF13-205ENST00000396545 SPATC1LQ9H0A9 340 aa20.45■□□□□ 0.86
TNFSF13-205ENST00000396545 TMX2Q9Y320 296 aa20.45■□□□□ 0.86
TNFSF13-205ENST00000396545 CYP2D7A0A087X1C5 515 aa20.44■□□□□ 0.86
TNFSF13-205ENST00000396545 PTMSP20962 102 aa20.44■□□□□ 0.86
TNFSF13-205ENST00000396545 ATP2B2Q01814 1243 aa20.44■□□□□ 0.86
TNFSF13-205ENST00000396545 ICA1Q05084 483 aa20.44■□□□□ 0.86
TNFSF13-205ENST00000396545 MB21D1Q8N884 522 aa20.44■□□□□ 0.86
TNFSF13-205ENST00000396545 SHCBP1Q8NEM2 672 aa20.44■□□□□ 0.86
TNFSF13-205ENST00000396545 LRCH3Q96II8 777 aa20.44■□□□□ 0.86
TNFSF13-205ENST00000396545 CCDC17Q96LX7 622 aa20.44■□□□□ 0.86
TNFSF13-205ENST00000396545 DDX20Q9UHI6 824 aaKnown RBP20.44■□□□□ 0.86
TNFSF13-205ENST00000396545 LAMA2P24043 3122 aaKnown RBP20.43■□□□□ 0.86
TNFSF13-205ENST00000396545 ZMYM6O95789 1325 aa20.43■□□□□ 0.86
TNFSF13-205ENST00000396545 STRNO43815 780 aa20.43■□□□□ 0.86
TNFSF13-205ENST00000396545 ADORA2AP29274 412 aa20.43■□□□□ 0.86
TNFSF13-205ENST00000396545 CYP2C19P33261 490 aa20.43■□□□□ 0.86
TNFSF13-205ENST00000396545 CDK8P49336 464 aa20.43■□□□□ 0.86
TNFSF13-205ENST00000396545 PKP1Q13835 747 aa20.43■□□□□ 0.86
TNFSF13-205ENST00000396545 ALX1Q15699 326 aa20.43■□□□□ 0.86
TNFSF13-205ENST00000396545 LRRC26Q2I0M4 334 aa20.43■□□□□ 0.86
TNFSF13-205ENST00000396545 ZSCAN31Q96LW9 406 aaPredicted RBP20.43■□□□□ 0.86
TNFSF13-205ENST00000396545 SH2D4AQ9H788 454 aa20.43■□□□□ 0.86
TNFSF13-205ENST00000396545 ARHGEF10LQ9HCE6 1279 aa20.43■□□□□ 0.86
TNFSF13-205ENST00000396545 ZDHHC9Q9Y397 364 aa20.43■□□□□ 0.86
TNFSF13-205ENST00000396545 TAF6LQ9Y6J9 622 aa20.43■□□□□ 0.86
TNFSF13-205ENST00000396545 USP17L12C9JPN9 530 aa20.42■□□□□ 0.86
TNFSF13-205ENST00000396545 USP17L21D6R901 530 aa20.42■□□□□ 0.86
TNFSF13-205ENST00000396545 MSCO60682 206 aa20.42■□□□□ 0.86
TNFSF13-205ENST00000396545 ERCC3P19447 782 aa20.42■□□□□ 0.86
TNFSF13-205ENST00000396545 DSG3P32926 999 aa20.42■□□□□ 0.86
TNFSF13-205ENST00000396545 OLFML2BQ68BL8 750 aa20.42■□□□□ 0.86
TNFSF13-205ENST00000396545 BLOC1S2Q6QNY1 142 aa20.42■□□□□ 0.86
TNFSF13-205ENST00000396545 C16orf86Q6ZW13 317 aa20.42■□□□□ 0.86
TNFSF13-205ENST00000396545 SPICE1Q8N0Z3 855 aa20.42■□□□□ 0.86
TNFSF13-205ENST00000396545 TRPV1Q8NER1 839 aa20.42■□□□□ 0.86
TNFSF13-205ENST00000396545 STRBPQ96SI9 672 aaKnown RBP20.42■□□□□ 0.86
TNFSF13-205ENST00000396545 VCPKMTQ9H867 229 aa20.42■□□□□ 0.86
TNFSF13-205ENST00000396545 SH2B1Q9NRF2 756 aaPredicted RBP20.42■□□□□ 0.86
TNFSF13-205ENST00000396545 PARP14Q460N5 1801 aa20.42■□□□□ 0.86
TNFSF13-205ENST00000396545 BAG4O95429 457 aaKnown RBP20.42■□□□□ 0.86
TNFSF13-205ENST00000396545 HMGB1P09429 215 aaKnown RBP20.42■□□□□ 0.86
TNFSF13-205ENST00000396545 CYBAP13498 195 aa20.42■□□□□ 0.86
TNFSF13-205ENST00000396545 RPS6KB1P23443 525 aa20.42■□□□□ 0.86
TNFSF13-205ENST00000396545 AMOTL1Q8IY63 956 aa20.42■□□□□ 0.86
TNFSF13-205ENST00000396545 PATL2C9JE40 543 aaKnown RBP20.41■□□□□ 0.86
TNFSF13-205ENST00000396545 FLOT1O75955 427 aa20.41■□□□□ 0.86
TNFSF13-205ENST00000396545 IMMTQ16891 758 aaKnown RBP20.41■□□□□ 0.86
TNFSF13-205ENST00000396545 DPP9Q86TI2 863 aa20.41■□□□□ 0.86
TNFSF13-205ENST00000396545 ATG4CQ96DT6 458 aa20.41■□□□□ 0.86
TNFSF13-205ENST00000396545 SLC4A4Q9Y6R1 1079 aa20.41■□□□□ 0.86
TNFSF13-205ENST00000396545 A0A0C4DFX4 3053 aa20.41■□□□□ 0.86
TNFSF13-205ENST00000396545 WDR46O15213 610 aaKnown RBP20.4■□□□□ 0.86
TNFSF13-205ENST00000396545 BRD1O95696 1058 aa20.4■□□□□ 0.86
TNFSF13-205ENST00000396545 CYP21A2P08686 494 aa20.4■□□□□ 0.86
TNFSF13-205ENST00000396545 CNGA1P29973 690 aa20.4■□□□□ 0.86
TNFSF13-205ENST00000396545 ANKRD1Q15327 319 aa20.4■□□□□ 0.86
TNFSF13-205ENST00000396545 CTR9Q6PD62 1173 aa20.4■□□□□ 0.86
TNFSF13-205ENST00000396545 NACAP1Q9BZK3 213 aa20.4■□□□□ 0.86
TNFSF13-205ENST00000396545 MROH8Q9H579 483 aa20.4■□□□□ 0.86
TNFSF13-205ENST00000396545 TRAK2O60296 914 aa20.39■□□□□ 0.85
TNFSF13-205ENST00000396545 COBLO75128 1261 aa20.39■□□□□ 0.85
TNFSF13-205ENST00000396545 LARGE1O95461 756 aa20.39■□□□□ 0.85
TNFSF13-205ENST00000396545 TDHQ8IZJ6 230 aa20.39■□□□□ 0.85
TNFSF13-205ENST00000396545 ABRAQ8N0Z2 381 aa20.39■□□□□ 0.85
TNFSF13-205ENST00000396545 KANSL2Q9H9L4 492 aa20.39■□□□□ 0.85
TNFSF13-205ENST00000396545 DNM1LO00429 736 aa20.38■□□□□ 0.85
TNFSF13-205ENST00000396545 FGAP02671 866 aa20.38■□□□□ 0.85
TNFSF13-205ENST00000396545 EEF2P13639 858 aaKnown RBP20.38■□□□□ 0.85
TNFSF13-205ENST00000396545 COL9A3Q14050 684 aaPredicted RBP20.38■□□□□ 0.85
TNFSF13-205ENST00000396545 PLS1Q14651 629 aa20.38■□□□□ 0.85
TNFSF13-205ENST00000396545 LRIT3Q3SXY7 679 aa20.38■□□□□ 0.85
TNFSF13-205ENST00000396545 GPR153Q6NV75 609 aa20.38■□□□□ 0.85
TNFSF13-205ENST00000396545 SENP6Q9GZR1 1112 aaPredicted RBP20.38■□□□□ 0.85
TNFSF13-205ENST00000396545 ADAMTS5Q9UNA0 930 aa20.38■□□□□ 0.85
TNFSF13-205ENST00000396545 ZSCAN21Q9Y5A6 473 aaPredicted RBP20.38■□□□□ 0.85
TNFSF13-205ENST00000396545 GIMAP6Q6P9H5 292 aa20.38■□□□□ 0.85
TNFSF13-205ENST00000396545 NCAPG2Q86XI2 1143 aa20.38■□□□□ 0.85
TNFSF13-205ENST00000396545 NEK1Q96PY6 1258 aa20.38■□□□□ 0.85
TNFSF13-205ENST00000396545 UBE2OQ9C0C9 1292 aaKnown RBP20.38■□□□□ 0.85
TNFSF13-205ENST00000396545 ARPP21Q9UBL0 812 aaPredicted RBP20.38■□□□□ 0.85
TNFSF13-205ENST00000396545 FOXP2O15409 715 aa20.37■□□□□ 0.85
TNFSF13-205ENST00000396545 TOB2Q14106 344 aaPredicted RBP20.37■□□□□ 0.85
TNFSF13-205ENST00000396545 TMEM132BQ14DG7 1078 aa20.37■□□□□ 0.85
TNFSF13-205ENST00000396545 GNL3Q9BVP2 549 aaKnown RBP eCLIP20.37■□□□□ 0.85
TNFSF13-205ENST00000396545 SLC5A4Q9NY91 659 aa20.37■□□□□ 0.85
TNFSF13-205ENST00000396545 GREB1LQ9C091 1923 aaPredicted RBP20.36■□□□□ 0.85
TNFSF13-205ENST00000396545 GOLGA6L22H0YM25 854 aa20.36■□□□□ 0.85
TNFSF13-205ENST00000396545 ZNF213O14771 459 aa20.36■□□□□ 0.85
TNFSF13-205ENST00000396545 APPP05067 770 aa20.36■□□□□ 0.85
TNFSF13-205ENST00000396545 ST3GAL1Q11201 340 aa20.36■□□□□ 0.85
TNFSF13-205ENST00000396545 ME3Q16798 604 aa20.36■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 55.8 ms