RNA–Protein interactions for RNA: ENST00000396082.2

UPK3A-202, Transcript of uroplakin 3A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene UPK3A, Length 627 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPK3A-202ENST00000396082 NEFLP07196 543 aa20.63■□□□□ 0.89
UPK3A-202ENST00000396082 HOXC6P09630 235 aa20.63■□□□□ 0.89
UPK3A-202ENST00000396082 CHMLP26374 656 aa20.63■□□□□ 0.89
UPK3A-202ENST00000396082 CCDC96Q2M329 555 aa20.63■□□□□ 0.89
UPK3A-202ENST00000396082 SNRNP48Q6IEG0 339 aaKnown RBP20.63■□□□□ 0.89
UPK3A-202ENST00000396082 REPS2Q8NFH8 660 aa20.63■□□□□ 0.89
UPK3A-202ENST00000396082 MMP19Q99542 508 aa20.63■□□□□ 0.89
UPK3A-202ENST00000396082 TEX13BQ9BXU2 312 aa20.63■□□□□ 0.89
UPK3A-202ENST00000396082 IL25Q9H293 177 aa20.63■□□□□ 0.89
UPK3A-202ENST00000396082 PDE4DIPQ5VU43 2346 aa20.62■□□□□ 0.89
UPK3A-202ENST00000396082 FARP2O94887 1054 aaPredicted RBP20.62■□□□□ 0.89
UPK3A-202ENST00000396082 TOP1P11387 765 aaKnown RBP20.62■□□□□ 0.89
UPK3A-202ENST00000396082 CACNB2Q08289 660 aaPredicted RBP20.62■□□□□ 0.89
UPK3A-202ENST00000396082 KCTD2Q14681 263 aa20.62■□□□□ 0.89
UPK3A-202ENST00000396082 MAP3K21Q5TCX8 1036 aa20.62■□□□□ 0.89
UPK3A-202ENST00000396082 FAM160B2Q86V87 743 aa20.62■□□□□ 0.89
UPK3A-202ENST00000396082 ABRAQ8N0Z2 381 aa20.62■□□□□ 0.89
UPK3A-202ENST00000396082 NPLOC4Q8TAT6 608 aa20.62■□□□□ 0.89
UPK3A-202ENST00000396082 CHURC1Q8WUH1 139 aa20.62■□□□□ 0.89
UPK3A-202ENST00000396082 TCP11L1Q9NUJ3 509 aa20.62■□□□□ 0.89
UPK3A-202ENST00000396082 CAPN2P17655 700 aa20.61■□□□□ 0.89
UPK3A-202ENST00000396082 KCTD1Q719H9 257 aa20.61■□□□□ 0.89
UPK3A-202ENST00000396082 TMEM47Q9BQJ4 181 aa20.61■□□□□ 0.89
UPK3A-202ENST00000396082 RAVER2Q9HCJ3 691 aaKnown RBP20.61■□□□□ 0.89
UPK3A-202ENST00000396082 FLRT1Q9NZU1 646 aa20.61■□□□□ 0.89
UPK3A-202ENST00000396082 ZNFX1Q9P2E3 1918 aaKnown RBP20.61■□□□□ 0.89
UPK3A-202ENST00000396082 KDM4AO75164 1064 aa20.6■□□□□ 0.89
UPK3A-202ENST00000396082 FDX1P10109 184 aa20.6■□□□□ 0.89
UPK3A-202ENST00000396082 NOVP48745 357 aa20.6■□□□□ 0.89
UPK3A-202ENST00000396082 NT5C2P49902 561 aa20.6■□□□□ 0.89
UPK3A-202ENST00000396082 RCSD1Q6JBY9 416 aa20.6■□□□□ 0.89
UPK3A-202ENST00000396082 RASGRP2Q7LDG7 609 aa20.6■□□□□ 0.89
UPK3A-202ENST00000396082 IQCA1Q86XH1 822 aa20.6■□□□□ 0.89
UPK3A-202ENST00000396082 DCAF4Q8WV16 495 aa20.6■□□□□ 0.89
UPK3A-202ENST00000396082 CCDC136Q96JN2 1154 aa20.6■□□□□ 0.89
UPK3A-202ENST00000396082 ZKSCAN3Q9BRR0 538 aa20.6■□□□□ 0.89
UPK3A-202ENST00000396082 SLC38A10Q9HBR0 1119 aa20.6■□□□□ 0.89
UPK3A-202ENST00000396082 B4E1Z4 1266 aa20.59■□□□□ 0.89
UPK3A-202ENST00000396082 COBLO75128 1261 aa20.59■□□□□ 0.89
UPK3A-202ENST00000396082 CCND3P30281 292 aaPredicted RBP20.59■□□□□ 0.89
UPK3A-202ENST00000396082 TTC14Q96N46 770 aa20.59■□□□□ 0.89
UPK3A-202ENST00000396082 KRT23Q9C075 422 aa20.59■□□□□ 0.89
UPK3A-202ENST00000396082 BRCA2P51587 3418 aa20.59■□□□□ 0.89
UPK3A-202ENST00000396082 ATP2A1O14983 1001 aa20.58■□□□□ 0.89
UPK3A-202ENST00000396082 CNGA1P29973 690 aa20.58■□□□□ 0.89
UPK3A-202ENST00000396082 CYP2C19P33261 490 aa20.58■□□□□ 0.89
UPK3A-202ENST00000396082 OAZ1P54368 228 aa20.58■□□□□ 0.89
UPK3A-202ENST00000396082 CCDC178Q5BJE1 867 aa20.58■□□□□ 0.89
UPK3A-202ENST00000396082 OLFML2BQ68BL8 750 aa20.58■□□□□ 0.89
UPK3A-202ENST00000396082 CRISPLD2Q9H0B8 497 aa20.58■□□□□ 0.89
UPK3A-202ENST00000396082 CNNM2Q9H8M5 875 aa20.58■□□□□ 0.89
UPK3A-202ENST00000396082 SGSM2O43147 1006 aa20.57■□□□□ 0.88
UPK3A-202ENST00000396082 PLA2G6O60733 806 aa20.57■□□□□ 0.88
UPK3A-202ENST00000396082 PGK2P07205 417 aa20.57■□□□□ 0.88
UPK3A-202ENST00000396082 PRPF38BQ5VTL8 546 aaKnown RBP20.57■□□□□ 0.88
UPK3A-202ENST00000396082 DDX11Q96FC9 970 aa20.57■□□□□ 0.88
UPK3A-202ENST00000396082 HTATIP2Q9BUP3 242 aa20.57■□□□□ 0.88
UPK3A-202ENST00000396082 PLXNA1Q9UIW2 1896 aa20.57■□□□□ 0.88
UPK3A-202ENST00000396082 RIPK3Q9Y572 518 aa20.57■□□□□ 0.88
UPK3A-202ENST00000396082 U3KPZ7 1027 aaPredicted RBP20.57■□□□□ 0.88
UPK3A-202ENST00000396082 FRMPD2Q68DX3 1309 aaPredicted RBP20.56■□□□□ 0.88
UPK3A-202ENST00000396082 PTH1RQ03431 593 aa20.56■□□□□ 0.88
UPK3A-202ENST00000396082 TRDNQ13061 729 aa20.56■□□□□ 0.88
UPK3A-202ENST00000396082 CCDC174Q6PII3 467 aa20.56■□□□□ 0.88
UPK3A-202ENST00000396082 KIAA1211Q6ZU35 1233 aa20.56■□□□□ 0.88
UPK3A-202ENST00000396082 SKAP1Q86WV1 359 aa20.56■□□□□ 0.88
UPK3A-202ENST00000396082 MAML3Q96JK9 1138 aa20.56■□□□□ 0.88
UPK3A-202ENST00000396082 UBAC1Q9BSL1 405 aa20.56■□□□□ 0.88
UPK3A-202ENST00000396082 HOMER2Q9NSB8 354 aa20.56■□□□□ 0.88
UPK3A-202ENST00000396082 FBXO40Q9UH90 709 aa20.56■□□□□ 0.88
UPK3A-202ENST00000396082 PRR12Q9ULL5 1215 aa20.56■□□□□ 0.88
UPK3A-202ENST00000396082 DGKHQ86XP1 1220 aa20.55■□□□□ 0.88
UPK3A-202ENST00000396082 ANKLE1Q8NAG6 615 aa20.55■□□□□ 0.88
UPK3A-202ENST00000396082 CHST13Q8NET6 341 aa20.55■□□□□ 0.88
UPK3A-202ENST00000396082 ZSCAN10Q96SZ4 725 aaPredicted RBP20.55■□□□□ 0.88
UPK3A-202ENST00000396082 KAT14Q9H8E8 782 aa20.55■□□□□ 0.88
UPK3A-202ENST00000396082 GPCPD1Q9NPB8 672 aa20.55■□□□□ 0.88
UPK3A-202ENST00000396082 TNRC18O15417 2968 aaPredicted RBP20.54■□□□□ 0.88
UPK3A-202ENST00000396082 PDHBP11177 359 aa20.54■□□□□ 0.88
UPK3A-202ENST00000396082 SLC16A2P36021 539 aa20.54■□□□□ 0.88
UPK3A-202ENST00000396082 UBE2Q1Q7Z7E8 422 aa20.54■□□□□ 0.88
UPK3A-202ENST00000396082 ANKRD35Q8N283 1001 aa20.54■□□□□ 0.88
UPK3A-202ENST00000396082 DPF3Q92784 378 aa20.54■□□□□ 0.88
UPK3A-202ENST00000396082 PAWRQ96IZ0 340 aaKnown RBP20.54■□□□□ 0.88
UPK3A-202ENST00000396082 ZSWIM5Q9P217 1185 aa20.54■□□□□ 0.88
UPK3A-202ENST00000396082 TNKSO95271 1327 aa20.53■□□□□ 0.88
UPK3A-202ENST00000396082 FRMPD3Q5JV73 1810 aa20.53■□□□□ 0.88
UPK3A-202ENST00000396082 MSCO60682 206 aa20.53■□□□□ 0.88
UPK3A-202ENST00000396082 ALAS1P13196 640 aa20.53■□□□□ 0.88
UPK3A-202ENST00000396082 CYBAP13498 195 aa20.53■□□□□ 0.88
UPK3A-202ENST00000396082 SNAP25P60880 206 aa20.53■□□□□ 0.88
UPK3A-202ENST00000396082 BMP2KLQ5H9B9 411 aa20.53■□□□□ 0.88
UPK3A-202ENST00000396082 SYDE2Q5VT97 1194 aa20.53■□□□□ 0.88
UPK3A-202ENST00000396082 TTBK2Q6IQ55 1244 aa20.53■□□□□ 0.88
UPK3A-202ENST00000396082 NECAB2Q7Z6G3 386 aa20.53■□□□□ 0.88
UPK3A-202ENST00000396082 RALYLQ86SE5 291 aaKnown RBP20.53■□□□□ 0.88
UPK3A-202ENST00000396082 AGBL1Q96MI9 1066 aa20.53■□□□□ 0.88
UPK3A-202ENST00000396082 ACAD9Q9H845 621 aa20.53■□□□□ 0.88
UPK3A-202ENST00000396082 RNF146Q9NTX7 359 aa20.53■□□□□ 0.88
UPK3A-202ENST00000396082 DDX20Q9UHI6 824 aaKnown RBP20.53■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms