RNA–Protein interactions for RNA: ENST00000395978.7

BDNF-203, Transcript of brain derived neurotrophic factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BDNF, Length 3,988 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BDNF-203ENST00000395978 PFKFB3Q16875 520 aaPredicted RBP7.34□□□□□ -1.23
BDNF-203ENST00000395978 DYMQ7RTS9 669 aa7.34□□□□□ -1.23
BDNF-203ENST00000395978 SLF1Q9BQI6 1058 aa7.34□□□□□ -1.23
BDNF-203ENST00000395978 NMT2O60551 498 aa7.34□□□□□ -1.23
BDNF-203ENST00000395978 GOLGA8FQ08AF8 430 aa7.34□□□□□ -1.23
BDNF-203ENST00000395978 GOLGA8DPQ0D2H9 430 aa7.34□□□□□ -1.23
BDNF-203ENST00000395978 MCM6Q14566 821 aa7.34□□□□□ -1.23
BDNF-203ENST00000395978 RC3H1Q5TC82 1133 aaKnown RBP7.34□□□□□ -1.23
BDNF-203ENST00000395978 TMC4Q7Z404 712 aa7.34□□□□□ -1.23
BDNF-203ENST00000395978 LRRC47Q8N1G4 583 aaKnown RBP7.34□□□□□ -1.23
BDNF-203ENST00000395978 RNF216Q9NWF9 866 aaPredicted RBP7.34□□□□□ -1.23
BDNF-203ENST00000395978 DNM2P50570 870 aa7.34□□□□□ -1.24
BDNF-203ENST00000395978 COPB1P53618 953 aaKnown RBP7.34□□□□□ -1.24
BDNF-203ENST00000395978 CHMP4BP1P59074 171 aa7.34□□□□□ -1.24
BDNF-203ENST00000395978 TCP10Q12799 353 aa7.34□□□□□ -1.24
BDNF-203ENST00000395978 BARGINQ6ZT62 677 aa7.34□□□□□ -1.24
BDNF-203ENST00000395978 CCDC84Q86UT8 332 aaPredicted RBP7.34□□□□□ -1.24
BDNF-203ENST00000395978 METTL16Q86W50 562 aaKnown RBP7.34□□□□□ -1.24
BDNF-203ENST00000395978 NLGN1Q8N2Q7 840 aa7.34□□□□□ -1.24
BDNF-203ENST00000395978 AK8Q96MA6 479 aa7.34□□□□□ -1.24
BDNF-203ENST00000395978 CUEDC2Q9H467 287 aa7.34□□□□□ -1.24
BDNF-203ENST00000395978 SH3GLB2Q9NR46 395 aa7.34□□□□□ -1.24
BDNF-203ENST00000395978 EIF2AK3Q9NZJ5 1116 aaKnown RBP7.34□□□□□ -1.24
BDNF-203ENST00000395978 TUBE1Q9UJT0 475 aa7.34□□□□□ -1.24
BDNF-203ENST00000395978 FBXO2Q9UK22 296 aaPredicted RBP7.34□□□□□ -1.24
BDNF-203ENST00000395978 BCL9O00512 1426 aa7.34□□□□□ -1.24
BDNF-203ENST00000395978 CDK8P49336 464 aa7.33□□□□□ -1.24
BDNF-203ENST00000395978 SMIM5Q71RC9 77 aa7.33□□□□□ -1.24
BDNF-203ENST00000395978 FBXO33Q7Z6M2 555 aa7.33□□□□□ -1.24
BDNF-203ENST00000395978 SH3RF3Q8TEJ3 882 aaPredicted RBP7.33□□□□□ -1.24
BDNF-203ENST00000395978 DRC1Q96MC2 740 aa7.33□□□□□ -1.24
BDNF-203ENST00000395978 MAGEF1Q9HAY2 307 aa7.33□□□□□ -1.24
BDNF-203ENST00000395978 ZHX1Q9UKY1 873 aaPredicted RBP7.33□□□□□ -1.24
BDNF-203ENST00000395978 TRPC5Q9UL62 973 aaPredicted RBP7.33□□□□□ -1.24
BDNF-203ENST00000395978 FRMPD2Q68DX3 1309 aaPredicted RBP7.33□□□□□ -1.24
BDNF-203ENST00000395978 FOXN1O15353 648 aa7.33□□□□□ -1.24
BDNF-203ENST00000395978 ERLIN2O94905 339 aa7.33□□□□□ -1.24
BDNF-203ENST00000395978 RHOXF2BP0C7M4 288 aa7.33□□□□□ -1.24
BDNF-203ENST00000395978 MATR3P43243 847 aaKnown RBP eCLIP7.33□□□□□ -1.24
BDNF-203ENST00000395978 NOP2P46087 812 aaKnown RBP7.33□□□□□ -1.24
BDNF-203ENST00000395978 CETN1Q12798 172 aa7.33□□□□□ -1.24
BDNF-203ENST00000395978 HERC4Q5GLZ8 1057 aaPredicted RBP7.33□□□□□ -1.24
BDNF-203ENST00000395978 ZNF658Q5TYW1 1059 aaPredicted RBP7.33□□□□□ -1.24
BDNF-203ENST00000395978 USP17L2Q6R6M4 530 aa7.33□□□□□ -1.24
BDNF-203ENST00000395978 SLC4A9Q96Q91 983 aa7.33□□□□□ -1.24
BDNF-203ENST00000395978 RHOXF2Q9BQY4 288 aa7.33□□□□□ -1.24
BDNF-203ENST00000395978 PSTPIP2Q9H939 334 aa7.33□□□□□ -1.24
BDNF-203ENST00000395978 CD209Q9NNX6 404 aa7.33□□□□□ -1.24
BDNF-203ENST00000395978 SPATA31A5Q5VU36 1347 aa7.33□□□□□ -1.24
BDNF-203ENST00000395978 SPATA31A7Q8IWB4 1347 aa7.33□□□□□ -1.24
BDNF-203ENST00000395978 GOLGA6L10A6NI86 522 aa7.33□□□□□ -1.24
BDNF-203ENST00000395978 AP5Z1O43299 807 aa7.33□□□□□ -1.24
BDNF-203ENST00000395978 MYL1P05976 194 aa7.33□□□□□ -1.24
BDNF-203ENST00000395978 CASP14P31944 242 aa7.33□□□□□ -1.24
BDNF-203ENST00000395978 PDE6BP35913 854 aa7.33□□□□□ -1.24
BDNF-203ENST00000395978 SCNN1DP51172 638 aa7.33□□□□□ -1.24
BDNF-203ENST00000395978 DOK7Q18PE1 504 aa7.33□□□□□ -1.24
BDNF-203ENST00000395978 HAUS3Q68CZ6 603 aa7.33□□□□□ -1.24
BDNF-203ENST00000395978 SMAP1Q8IYB5 467 aaPredicted RBP7.33□□□□□ -1.24
BDNF-203ENST00000395978 SYCP3Q8IZU3 236 aa7.33□□□□□ -1.24
BDNF-203ENST00000395978 VGLL2Q8N8G2 317 aa7.33□□□□□ -1.24
BDNF-203ENST00000395978 LINC00116Q8NCU8 138 aa7.33□□□□□ -1.24
BDNF-203ENST00000395978 CCDC17Q96LX7 622 aa7.33□□□□□ -1.24
BDNF-203ENST00000395978 GPR101Q96P66 508 aaPredicted RBP7.33□□□□□ -1.24
BDNF-203ENST00000395978 TMEM47Q9BQJ4 181 aa7.33□□□□□ -1.24
BDNF-203ENST00000395978 SERPINB13Q9UIV8 391 aa7.33□□□□□ -1.24
BDNF-203ENST00000395978 JCADQ9P266 1359 aa7.33□□□□□ -1.24
BDNF-203ENST00000395978 TCRBV5S4A2TA0A5A2 114 aa7.32□□□□□ -1.24
BDNF-203ENST00000395978 H0YIN7 160 aa7.32□□□□□ -1.24
BDNF-203ENST00000395978 ASPRV1Q53RT3 343 aa7.32□□□□□ -1.24
BDNF-203ENST00000395978 SRBD1Q8N5C6 995 aaKnown RBP7.32□□□□□ -1.24
BDNF-203ENST00000395978 RWDD2AQ9UIY3 292 aa7.32□□□□□ -1.24
BDNF-203ENST00000395978 ANAPC4Q9UJX5 808 aa7.32□□□□□ -1.24
BDNF-203ENST00000395978 PCDHA12Q9UN75 941 aa7.32□□□□□ -1.24
BDNF-203ENST00000395978 SALL1Q9NSC2 1324 aa7.32□□□□□ -1.24
BDNF-203ENST00000395978 CETN3O15182 167 aa7.32□□□□□ -1.24
BDNF-203ENST00000395978 COBLO75128 1261 aa7.32□□□□□ -1.24
BDNF-203ENST00000395978 ADRA2BP18089 450 aa7.32□□□□□ -1.24
BDNF-203ENST00000395978 ARID5AQ03989 594 aa7.32□□□□□ -1.24
BDNF-203ENST00000395978 RBL2Q08999 1139 aa7.32□□□□□ -1.24
BDNF-203ENST00000395978 NFIXQ14938 502 aa7.32□□□□□ -1.24
BDNF-203ENST00000395978 PTPAQ15257 358 aa7.32□□□□□ -1.24
BDNF-203ENST00000395978 NTRK3Q16288 839 aa7.32□□□□□ -1.24
BDNF-203ENST00000395978 SBK1Q52WX2 424 aa7.32□□□□□ -1.24
BDNF-203ENST00000395978 GPATCH4Q5T3I0 446 aaKnown RBP7.32□□□□□ -1.24
BDNF-203ENST00000395978 C12orf60Q5U649 245 aa7.32□□□□□ -1.24
BDNF-203ENST00000395978 SLC44A5Q8NCS7 719 aa7.32□□□□□ -1.24
BDNF-203ENST00000395978 PIGSQ96S52 555 aa7.32□□□□□ -1.24
BDNF-203ENST00000395978 NT5C3AQ9H0P0 336 aa7.32□□□□□ -1.24
BDNF-203ENST00000395978 SAMM50Q9Y512 469 aa7.32□□□□□ -1.24
BDNF-203ENST00000395978 CAMTA1Q9Y6Y1 1673 aa7.32□□□□□ -1.24
BDNF-203ENST00000395978 EFCAB8A8MWE9 144 aa7.32□□□□□ -1.24
BDNF-203ENST00000395978 TMEM232C9JQI7 657 aa7.32□□□□□ -1.24
BDNF-203ENST00000395978 PRR29P0C7W0 189 aa7.32□□□□□ -1.24
BDNF-203ENST00000395978 RPL13P26373 211 aaKnown RBP7.32□□□□□ -1.24
BDNF-203ENST00000395978 EEF1GP26641 437 aaKnown RBP7.32□□□□□ -1.24
BDNF-203ENST00000395978 CASP1P29466 404 aa7.32□□□□□ -1.24
BDNF-203ENST00000395978 IFI16Q16666 785 aaKnown RBP7.32□□□□□ -1.24
BDNF-203ENST00000395978 ODF2Q5BJF6 829 aa7.32□□□□□ -1.24
BDNF-203ENST00000395978 RBM26Q5T8P6 1007 aaKnown RBP7.32□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms