RNA–Protein interactions for RNA: ENST00000394597.6

RFFL-202, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RFFL, Length 4,227 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-202ENST00000394597 NSUN4Q96CB9 384 aaKnown RBP6.36□□□□□ -1.39
RFFL-202ENST00000394597 CCDC17Q96LX7 622 aa6.36□□□□□ -1.39
RFFL-202ENST00000394597 AK9Q5TCS8 1911 aa6.36□□□□□ -1.39
RFFL-202ENST00000394597 CACNA1FO60840 1977 aa6.36□□□□□ -1.39
RFFL-202ENST00000394597 hCG_1642624A0A1W2PR95 340 aa6.36□□□□□ -1.39
RFFL-202ENST00000394597 HSF2BPO75031 334 aa6.36□□□□□ -1.39
RFFL-202ENST00000394597 SETSIPP0DME0 302 aa6.36□□□□□ -1.39
RFFL-202ENST00000394597 MCM7P33993 719 aa6.36□□□□□ -1.39
RFFL-202ENST00000394597 FAM160A1Q05DH4 1040 aa6.36□□□□□ -1.39
RFFL-202ENST00000394597 SLC15A2Q16348 729 aa6.36□□□□□ -1.39
RFFL-202ENST00000394597 CERKLQ49MI3 558 aaPredicted RBP6.36□□□□□ -1.39
RFFL-202ENST00000394597 DALRD3Q5D0E6 543 aaKnown RBP6.36□□□□□ -1.39
RFFL-202ENST00000394597 MYSM1Q5VVJ2 828 aa6.36□□□□□ -1.39
RFFL-202ENST00000394597 PTF1AQ7RTS3 328 aa6.36□□□□□ -1.39
RFFL-202ENST00000394597 COL23A1Q86Y22 540 aaPredicted RBP6.36□□□□□ -1.39
RFFL-202ENST00000394597 TBC1D10CQ8IV04 446 aa6.36□□□□□ -1.39
RFFL-202ENST00000394597 MB21D2Q8IYB1 491 aaPredicted RBP6.36□□□□□ -1.39
RFFL-202ENST00000394597 TDRD7Q8NHU6 1098 aaKnown RBP6.36□□□□□ -1.39
RFFL-202ENST00000394597 SMARCC2Q8TAQ2 1214 aa6.36□□□□□ -1.39
RFFL-202ENST00000394597 RABGGTAQ92696 567 aa6.36□□□□□ -1.39
RFFL-202ENST00000394597 PPP1R13BQ96KQ4 1090 aa6.36□□□□□ -1.39
RFFL-202ENST00000394597 MTA3Q9BTC8 594 aa6.36□□□□□ -1.39
RFFL-202ENST00000394597 VPS54Q9P1Q0 977 aa6.36□□□□□ -1.39
RFFL-202ENST00000394597 PIM2Q9P1W9 311 aa6.36□□□□□ -1.39
RFFL-202ENST00000394597 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP6.36□□□□□ -1.39
RFFL-202ENST00000394597 FAM208AQ9UK61 1670 aaKnown RBP6.35□□□□□ -1.39
RFFL-202ENST00000394597 A0A1B0GVL5 298 aa6.35□□□□□ -1.39
RFFL-202ENST00000394597 PSDA5PKW4 1024 aaPredicted RBP6.35□□□□□ -1.39
RFFL-202ENST00000394597 USP27XA6NNY8 438 aa6.35□□□□□ -1.39
RFFL-202ENST00000394597 H7C1D1 291 aa6.35□□□□□ -1.39
RFFL-202ENST00000394597 PLSCR1O15162 318 aa6.35□□□□□ -1.39
RFFL-202ENST00000394597 YEATS4O95619 227 aa6.35□□□□□ -1.39
RFFL-202ENST00000394597 EPS15P42566 896 aa6.35□□□□□ -1.39
RFFL-202ENST00000394597 DTHD1Q6ZMT9 781 aa6.35□□□□□ -1.39
RFFL-202ENST00000394597 CEP120Q8N960 986 aa6.35□□□□□ -1.39
RFFL-202ENST00000394597 HOOK2Q96ED9 719 aa6.35□□□□□ -1.39
RFFL-202ENST00000394597 PARD6BQ9BYG5 372 aa6.35□□□□□ -1.39
RFFL-202ENST00000394597 XPO5Q9HAV4 1204 aaKnown RBP eCLIP6.35□□□□□ -1.39
RFFL-202ENST00000394597 DCP1AQ9NPI6 582 aaPredicted RBP6.35□□□□□ -1.39
RFFL-202ENST00000394597 GPHNQ9NQX3 736 aaPredicted RBP6.35□□□□□ -1.39
RFFL-202ENST00000394597 ZNHIT6Q9NWK9 470 aaKnown RBP6.35□□□□□ -1.39
RFFL-202ENST00000394597 CCDC151A5D8V7 595 aa6.35□□□□□ -1.39
RFFL-202ENST00000394597 TMCO5BA8MYB1 307 aa6.35□□□□□ -1.39
RFFL-202ENST00000394597 CUTAO60888 179 aa6.35□□□□□ -1.39
RFFL-202ENST00000394597 RPSAP08865 295 aaKnown RBP6.35□□□□□ -1.39
RFFL-202ENST00000394597 EXOSC10Q01780 885 aaKnown RBP6.35□□□□□ -1.39
RFFL-202ENST00000394597 MAP2K1Q02750 393 aaPredicted RBP6.35□□□□□ -1.39
RFFL-202ENST00000394597 EZH2Q15910 746 aaKnown RBP6.35□□□□□ -1.39
RFFL-202ENST00000394597 ENOX2Q16206 610 aaKnown RBP6.35□□□□□ -1.39
RFFL-202ENST00000394597 KLHL10Q6JEL2 608 aa6.35□□□□□ -1.39
RFFL-202ENST00000394597 CC2D1AQ6P1N0 951 aaPredicted RBP6.35□□□□□ -1.39
RFFL-202ENST00000394597 PIK3AP1Q6ZUJ8 805 aa6.35□□□□□ -1.39
RFFL-202ENST00000394597 TMEM87AQ8NBN3 555 aa6.35□□□□□ -1.39
RFFL-202ENST00000394597 BAG1Q99933 345 aaPredicted RBP6.35□□□□□ -1.39
RFFL-202ENST00000394597 LRRC27Q9C0I9 530 aa6.35□□□□□ -1.39
RFFL-202ENST00000394597 GLT8D2Q9H1C3 349 aa6.35□□□□□ -1.39
RFFL-202ENST00000394597 SUGT1Q9Y2Z0 365 aa6.35□□□□□ -1.39
RFFL-202ENST00000394597 SPDYE3A6NKU9 549 aa6.35□□□□□ -1.39
RFFL-202ENST00000394597 TCP10L2B9ZVM9 353 aa6.35□□□□□ -1.39
RFFL-202ENST00000394597 KLRF2D3W0D1 207 aa6.35□□□□□ -1.39
RFFL-202ENST00000394597 FMNL1O95466 1100 aaPredicted RBP6.35□□□□□ -1.39
RFFL-202ENST00000394597 IFNAR1P17181 557 aa6.35□□□□□ -1.39
RFFL-202ENST00000394597 TNFAIP1Q13829 316 aa6.35□□□□□ -1.39
RFFL-202ENST00000394597 ZKSCAN8Q15776 578 aaPredicted RBP6.35□□□□□ -1.39
RFFL-202ENST00000394597 STOX1Q6ZVD7 989 aa6.35□□□□□ -1.39
RFFL-202ENST00000394597 CYB5R4Q7L1T6 521 aa6.35□□□□□ -1.39
RFFL-202ENST00000394597 CCDC50Q8IVM0 306 aa6.35□□□□□ -1.39
RFFL-202ENST00000394597 DYNLL2Q96FJ2 89 aa6.35□□□□□ -1.39
RFFL-202ENST00000394597 CALR3Q96L12 384 aaKnown RBP6.35□□□□□ -1.39
RFFL-202ENST00000394597 RNF26Q9BY78 433 aaPredicted RBP6.35□□□□□ -1.39
RFFL-202ENST00000394597 XPO4Q9C0E2 1151 aaKnown RBP6.35□□□□□ -1.39
RFFL-202ENST00000394597 DHX36Q9H2U1 1008 aaKnown RBP6.35□□□□□ -1.39
RFFL-202ENST00000394597 MED4Q9NPJ6 270 aa6.35□□□□□ -1.39
RFFL-202ENST00000394597 IRAK4Q9NWZ3 460 aa6.35□□□□□ -1.39
RFFL-202ENST00000394597 SERPINB13Q9UIV8 391 aa6.35□□□□□ -1.39
RFFL-202ENST00000394597 MROH7-TTC4A0A0A0MT08 1334 aa6.34□□□□□ -1.39
RFFL-202ENST00000394597 BUB1BO60566 1050 aaPredicted RBP6.34□□□□□ -1.39
RFFL-202ENST00000394597 RAD17O75943 681 aa6.34□□□□□ -1.39
RFFL-202ENST00000394597 MATR3P43243 847 aaKnown RBP eCLIP6.34□□□□□ -1.393e-6■■■□□ 15.2
RFFL-202ENST00000394597 TAX1BP1Q86VP1 789 aa6.34□□□□□ -1.39
RFFL-202ENST00000394597 KCNB2Q92953 911 aa6.34□□□□□ -1.39
RFFL-202ENST00000394597 CEP89Q96ST8 783 aa6.34□□□□□ -1.39
RFFL-202ENST00000394597 NAP1L4Q99733 375 aaKnown RBP6.34□□□□□ -1.39
RFFL-202ENST00000394597 SCG2P13521 617 aa6.34□□□□□ -1.39
RFFL-202ENST00000394597 STAT6P42226 847 aa6.34□□□□□ -1.39
RFFL-202ENST00000394597 AFMP43652 599 aa6.34□□□□□ -1.39
RFFL-202ENST00000394597 CDK8P49336 464 aa6.34□□□□□ -1.39
RFFL-202ENST00000394597 TTC38Q5R3I4 469 aa6.34□□□□□ -1.39
RFFL-202ENST00000394597 DGKHQ86XP1 1220 aa6.34□□□□□ -1.39
RFFL-202ENST00000394597 NOSTRINQ8IVI9 506 aa6.34□□□□□ -1.39
RFFL-202ENST00000394597 DHX58Q96C10 678 aa6.34□□□□□ -1.39
RFFL-202ENST00000394597 IL17RAQ96F46 866 aa6.34□□□□□ -1.39
RFFL-202ENST00000394597 GDAP1L1Q96MZ0 367 aa6.34□□□□□ -1.39
RFFL-202ENST00000394597 USP28Q96RU2 1077 aa6.34□□□□□ -1.39
RFFL-202ENST00000394597 NUCKS1Q9H1E3 243 aaKnown RBP6.34□□□□□ -1.39
RFFL-202ENST00000394597 SLTMQ9NWH9 1034 aaKnown RBP eCLIP6.34□□□□□ -1.39
RFFL-202ENST00000394597 RMND1Q9NWS8 449 aa6.34□□□□□ -1.39
RFFL-202ENST00000394597 ALS2Q96Q42 1657 aa6.34□□□□□ -1.39
RFFL-202ENST00000394597 ARHGAP6O43182 974 aa6.34□□□□□ -1.39
RFFL-202ENST00000394597 ECE2O60344 883 aa6.34□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms