RNA–Protein interactions for RNA: ENST00000389645.7

CAPRIN1-202, Transcript of cell cycle associated protein 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CAPRIN1, Length 3,498 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPRIN1-202ENST00000389645 PCDHAC2Q9Y5I4 1007 aa13.67□□□□□ -0.22
CAPRIN1-202ENST00000389645 TNS1Q9HBL0 1735 aaKnown RBP13.67□□□□□ -0.22
CAPRIN1-202ENST00000389645 CCDC88AQ3V6T2 1871 aa13.67□□□□□ -0.22
CAPRIN1-202ENST00000389645 TSPY3P0CV98 308 aa13.67□□□□□ -0.22
CAPRIN1-202ENST00000389645 TSPY8P0CW00 308 aa13.67□□□□□ -0.22
CAPRIN1-202ENST00000389645 MTF1Q14872 753 aa13.67□□□□□ -0.22
CAPRIN1-202ENST00000389645 GPIHBP1Q8IV16 184 aa13.67□□□□□ -0.22
CAPRIN1-202ENST00000389645 ANKRD20A12PQ8NF67 263 aa13.67□□□□□ -0.22
CAPRIN1-202ENST00000389645 NUP88Q99567 741 aaPredicted RBP13.67□□□□□ -0.22
CAPRIN1-202ENST00000389645 IRX2Q9BZI1 471 aaPredicted RBP13.67□□□□□ -0.22
CAPRIN1-202ENST00000389645 COA1Q9GZY4 146 aa13.67□□□□□ -0.22
CAPRIN1-202ENST00000389645 TTF2Q9UNY4 1162 aaKnown RBP13.67□□□□□ -0.22
CAPRIN1-202ENST00000389645 DDX52Q9Y2R4 599 aaKnown RBP eCLIP13.67□□□□□ -0.22
CAPRIN1-202ENST00000389645 STK36Q9NRP7 1315 aa13.67□□□□□ -0.22
CAPRIN1-202ENST00000389645 SYNRGQ9UMZ2 1314 aa13.67□□□□□ -0.22
CAPRIN1-202ENST00000389645 SLURP2P0DP57 97 aa13.66□□□□□ -0.22
CAPRIN1-202ENST00000389645 CAPN2P17655 700 aa13.66□□□□□ -0.22
CAPRIN1-202ENST00000389645 ATP2B2Q01814 1243 aa13.66□□□□□ -0.22
CAPRIN1-202ENST00000389645 TMC4Q7Z404 712 aa13.66□□□□□ -0.22
CAPRIN1-202ENST00000389645 ARPP21Q9UBL0 812 aaPredicted RBP13.66□□□□□ -0.22
CAPRIN1-202ENST00000389645 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP13.66□□□□□ -0.223e-13■■■■□ 19.8
CAPRIN1-202ENST00000389645 USP17L3A6NCW0 530 aa13.66□□□□□ -0.22
CAPRIN1-202ENST00000389645 USP17L4A6NCW7 530 aa13.66□□□□□ -0.22
CAPRIN1-202ENST00000389645 TOGARAM2Q6ZUX3 1019 aa13.66□□□□□ -0.22
CAPRIN1-202ENST00000389645 USP17L1Q7RTZ2 530 aa13.66□□□□□ -0.22
CAPRIN1-202ENST00000389645 TEX2Q8IWB9 1127 aa13.66□□□□□ -0.22
CAPRIN1-202ENST00000389645 SRBD1Q8N5C6 995 aaKnown RBP13.66□□□□□ -0.22
CAPRIN1-202ENST00000389645 DAGLAQ9Y4D2 1042 aa13.66□□□□□ -0.22
CAPRIN1-202ENST00000389645 GPR75-ASB3A0A0A6YYF3 556 aa13.66□□□□□ -0.22
CAPRIN1-202ENST00000389645 ARHGAP6O43182 974 aa13.66□□□□□ -0.22
CAPRIN1-202ENST00000389645 C21orf2O43822 256 aa13.66□□□□□ -0.22
CAPRIN1-202ENST00000389645 PPP4CP60510 307 aa13.66□□□□□ -0.22
CAPRIN1-202ENST00000389645 UIMC1Q96RL1 719 aa13.66□□□□□ -0.22
CAPRIN1-202ENST00000389645 TAB2Q9NYJ8 693 aa13.66□□□□□ -0.22
CAPRIN1-202ENST00000389645 PSDA5PKW4 1024 aaPredicted RBP13.65□□□□□ -0.22
CAPRIN1-202ENST00000389645 POLR3GO15318 223 aaPredicted RBP13.65□□□□□ -0.22
CAPRIN1-202ENST00000389645 ERCC3P19447 782 aa13.65□□□□□ -0.22
CAPRIN1-202ENST00000389645 STAT6P42226 847 aa13.65□□□□□ -0.22
CAPRIN1-202ENST00000389645 RHBDL3P58872 404 aa13.65□□□□□ -0.22
CAPRIN1-202ENST00000389645 SBK1Q52WX2 424 aa13.65□□□□□ -0.22
CAPRIN1-202ENST00000389645 HSD3B7Q9H2F3 369 aa13.65□□□□□ -0.22
CAPRIN1-202ENST00000389645 ST7Q9NRC1 585 aa13.65□□□□□ -0.22
CAPRIN1-202ENST00000389645 A0A087X0B3 334 aa13.65□□□□□ -0.22
CAPRIN1-202ENST00000389645 SOWAHDA6NJG2 315 aa13.65□□□□□ -0.22
CAPRIN1-202ENST00000389645 TULP1O00294 542 aaPredicted RBP13.65□□□□□ -0.22
CAPRIN1-202ENST00000389645 FGRP09769 529 aa13.65□□□□□ -0.22
CAPRIN1-202ENST00000389645 UBA7P41226 1012 aa13.65□□□□□ -0.22
CAPRIN1-202ENST00000389645 KIAA0825Q8IV33 1275 aa13.65□□□□□ -0.22
CAPRIN1-202ENST00000389645 IQUBQ8NA54 791 aa13.65□□□□□ -0.22
CAPRIN1-202ENST00000389645 FBXO41Q8TF61 875 aa13.65□□□□□ -0.22
CAPRIN1-202ENST00000389645 PAGE5Q96GU1 130 aa13.65□□□□□ -0.22
CAPRIN1-202ENST00000389645 RBM28Q9NW13 759 aaKnown RBP13.65□□□□□ -0.22
CAPRIN1-202ENST00000389645 ARGLU1Q9NWB6 273 aaPredicted RBP13.65□□□□□ -0.22
CAPRIN1-202ENST00000389645 PUF60Q9UHX1 559 aaKnown RBP13.65□□□□□ -0.22
CAPRIN1-202ENST00000389645 SCG2P13521 617 aa13.65□□□□□ -0.23
CAPRIN1-202ENST00000389645 KIF5BP33176 963 aa13.65□□□□□ -0.23
CAPRIN1-202ENST00000389645 BAG6P46379 1132 aa13.65□□□□□ -0.23
CAPRIN1-202ENST00000389645 TBC1D22AQ8WUA7 517 aa13.65□□□□□ -0.23
CAPRIN1-202ENST00000389645 IL17RBQ9NRM6 502 aa13.65□□□□□ -0.23
CAPRIN1-202ENST00000389645 OGFRQ9NZT2 677 aa13.65□□□□□ -0.23
CAPRIN1-202ENST00000389645 COL11A2P13942 1736 aaPredicted RBP13.64□□□□□ -0.23
CAPRIN1-202ENST00000389645 AKR1B15C9JRZ8 316 aaPredicted RBP13.64□□□□□ -0.23
CAPRIN1-202ENST00000389645 CALM1P0DP23 149 aa13.64□□□□□ -0.23
CAPRIN1-202ENST00000389645 CALM2P0DP24 149 aa13.64□□□□□ -0.23
CAPRIN1-202ENST00000389645 CALM3P0DP25 149 aa13.64□□□□□ -0.23
CAPRIN1-202ENST00000389645 TROAPQ12815 778 aa13.64□□□□□ -0.23
CAPRIN1-202ENST00000389645 AOC3Q16853 763 aa13.64□□□□□ -0.23
CAPRIN1-202ENST00000389645 PNMA1Q8ND90 353 aa13.64□□□□□ -0.23
CAPRIN1-202ENST00000389645 RNF216Q9NWF9 866 aaPredicted RBP13.64□□□□□ -0.23
CAPRIN1-202ENST00000389645 FAM205AQ6ZU69 1335 aa13.64□□□□□ -0.23
CAPRIN1-202ENST00000389645 TIAM2Q8IVF5 1701 aa13.64□□□□□ -0.23
CAPRIN1-202ENST00000389645 CACNB3P54284 484 aa13.64□□□□□ -0.23
CAPRIN1-202ENST00000389645 EIF6P56537 245 aaKnown RBP13.64□□□□□ -0.23
CAPRIN1-202ENST00000389645 PKN1Q16512 942 aa13.64□□□□□ -0.23
CAPRIN1-202ENST00000389645 KIF4BQ2VIQ3 1234 aa13.64□□□□□ -0.23
CAPRIN1-202ENST00000389645 TMCO3Q6UWJ1 677 aa13.64□□□□□ -0.23
CAPRIN1-202ENST00000389645 TMTC3Q6ZXV5 915 aa13.64□□□□□ -0.23
CAPRIN1-202ENST00000389645 STAG2Q8N3U4 1231 aa13.64□□□□□ -0.23
CAPRIN1-202ENST00000389645 SLX4Q8IY92 1834 aa13.64□□□□□ -0.23
CAPRIN1-202ENST00000389645 PP2D1A8MPX8 630 aa13.63□□□□□ -0.23
CAPRIN1-202ENST00000389645 PRPF3O43395 683 aaKnown RBP13.63□□□□□ -0.23
CAPRIN1-202ENST00000389645 ACTN4O43707 911 aaKnown RBP13.63□□□□□ -0.23
CAPRIN1-202ENST00000389645 ORC4O43929 436 aa13.63□□□□□ -0.23
CAPRIN1-202ENST00000389645 MARCH6O60337 910 aa13.63□□□□□ -0.23
CAPRIN1-202ENST00000389645 SLFN14P0C7P3 912 aa13.63□□□□□ -0.23
CAPRIN1-202ENST00000389645 INF2Q27J81 1249 aa13.63□□□□□ -0.23
CAPRIN1-202ENST00000389645 TAF3Q5VWG9 929 aa13.63□□□□□ -0.23
CAPRIN1-202ENST00000389645 ENOX1Q8TC92 643 aaKnown RBP13.63□□□□□ -0.23
CAPRIN1-202ENST00000389645 INTS13Q9NVM9 706 aa13.63□□□□□ -0.23
CAPRIN1-202ENST00000389645 FLT1P17948 1338 aa13.63□□□□□ -0.23
CAPRIN1-202ENST00000389645 RBL2Q08999 1139 aa13.63□□□□□ -0.23
CAPRIN1-202ENST00000389645 RCSD1Q6JBY9 416 aa13.63□□□□□ -0.23
CAPRIN1-202ENST00000389645 RASGRP2Q7LDG7 609 aa13.63□□□□□ -0.23
CAPRIN1-202ENST00000389645 WDR24Q96S15 920 aa13.63□□□□□ -0.23
CAPRIN1-202ENST00000389645 FEZ1Q99689 392 aa13.63□□□□□ -0.23
CAPRIN1-202ENST00000389645 DUOX1Q9NRD9 1551 aa13.63□□□□□ -0.23
CAPRIN1-202ENST00000389645 ZBTB7AO95365 584 aa13.63□□□□□ -0.23
CAPRIN1-202ENST00000389645 CD44P16070 742 aaKnown RBP13.63□□□□□ -0.23
CAPRIN1-202ENST00000389645 CASP14P31944 242 aa13.63□□□□□ -0.23
CAPRIN1-202ENST00000389645 CUL4BQ13620 913 aa13.63□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 56.8 ms