RNA–Protein interactions for RNA: ENST00000378572.7

PRPF18-202, Transcript of pre-mRNA processing factor 18, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRPF18, Length 1,717 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF18-202ENST00000378572 GNAT2P19087 354 aa16.28■□□□□ 0.2
PRPF18-202ENST00000378572 SBK1Q52WX2 424 aa16.28■□□□□ 0.2
PRPF18-202ENST00000378572 FAM47AQ5JRC9 791 aa16.28■□□□□ 0.2
PRPF18-202ENST00000378572 SNRNP48Q6IEG0 339 aaKnown RBP16.28■□□□□ 0.2
PRPF18-202ENST00000378572 CASC1Q6TDU7 716 aa16.28■□□□□ 0.2
PRPF18-202ENST00000378572 ZNF444Q8N0Y2 327 aaPredicted RBP16.28■□□□□ 0.2
PRPF18-202ENST00000378572 RILPL2Q969X0 211 aa16.28■□□□□ 0.2
PRPF18-202ENST00000378572 FSD1Q9BTV5 496 aa16.28■□□□□ 0.2
PRPF18-202ENST00000378572 M0R2C6 588 aa16.28■□□□□ 0.2
PRPF18-202ENST00000378572 ADCYAP1R1P41586 468 aa16.28■□□□□ 0.2
PRPF18-202ENST00000378572 GIMAP6Q6P9H5 292 aa16.28■□□□□ 0.2
PRPF18-202ENST00000378572 NACAP1Q9BZK3 213 aa16.28■□□□□ 0.2
PRPF18-202ENST00000378572 XPNPEP3Q9NQH7 507 aa16.28■□□□□ 0.2
PRPF18-202ENST00000378572 TSHZ2Q9NRE2 1034 aa16.28■□□□□ 0.2
PRPF18-202ENST00000378572 CLIP2Q9UDT6 1046 aa16.28■□□□□ 0.2
PRPF18-202ENST00000378572 ROBO3Q96MS0 1386 aa16.27■□□□□ 0.2
PRPF18-202ENST00000378572 NDUFB10O96000 172 aa16.27■□□□□ 0.19
PRPF18-202ENST00000378572 TRIM60Q495X7 471 aa16.27■□□□□ 0.19
PRPF18-202ENST00000378572 CPXCR1Q8N123 301 aa16.27■□□□□ 0.19
PRPF18-202ENST00000378572 DDX11Q96FC9 970 aa16.27■□□□□ 0.19
PRPF18-202ENST00000378572 GNL3Q9BVP2 549 aaKnown RBP eCLIP16.27■□□□□ 0.19
PRPF18-202ENST00000378572 TEX13BQ9BXU2 312 aa16.27■□□□□ 0.19
PRPF18-202ENST00000378572 EPB41L4AQ9HCS5 686 aaPredicted RBP16.27■□□□□ 0.19
PRPF18-202ENST00000378572 CNPY2Q9Y2B0 182 aa16.27■□□□□ 0.19
PRPF18-202ENST00000378572 F5H6K3 240 aa16.26■□□□□ 0.19
PRPF18-202ENST00000378572 ZBED4O75132 1171 aa16.26■□□□□ 0.19
PRPF18-202ENST00000378572 KLRC3Q07444 240 aa16.26■□□□□ 0.19
PRPF18-202ENST00000378572 LRRC41Q15345 812 aa16.26■□□□□ 0.19
PRPF18-202ENST00000378572 SLC39A5Q6ZMH5 540 aa16.26■□□□□ 0.19
PRPF18-202ENST00000378572 LRRC47Q8N1G4 583 aaKnown RBP16.26■□□□□ 0.19
PRPF18-202ENST00000378572 KIFC2Q96AC6 838 aa16.26■□□□□ 0.19
PRPF18-202ENST00000378572 TINF2Q9BSI4 451 aa16.26■□□□□ 0.19
PRPF18-202ENST00000378572 NYAP2Q9P242 653 aa16.26■□□□□ 0.19
PRPF18-202ENST00000378572 ZNF214Q9UL59 606 aaPredicted RBP16.26■□□□□ 0.19
PRPF18-202ENST00000378572 PLXNA1Q9UIW2 1896 aa16.26■□□□□ 0.19
PRPF18-202ENST00000378572 HIP1O00291 1037 aa16.25■□□□□ 0.19
PRPF18-202ENST00000378572 IGHA2P01877 340 aa16.25■□□□□ 0.19
PRPF18-202ENST00000378572 SLC3A2P08195 630 aaKnown RBP16.25■□□□□ 0.19
PRPF18-202ENST00000378572 GPR153Q6NV75 609 aa16.25■□□□□ 0.19
PRPF18-202ENST00000378572 RNF180Q86T96 592 aa16.25■□□□□ 0.19
PRPF18-202ENST00000378572 ADAMTS5Q9UNA0 930 aa16.25■□□□□ 0.19
PRPF18-202ENST00000378572 GREB1LQ9C091 1923 aaPredicted RBP16.25■□□□□ 0.19
PRPF18-202ENST00000378572 ZNFX1Q9P2E3 1918 aaKnown RBP16.25■□□□□ 0.19
PRPF18-202ENST00000378572 MYH4Q9Y623 1939 aa16.25■□□□□ 0.19
PRPF18-202ENST00000378572 PGK1P00558 417 aa16.25■□□□□ 0.19
PRPF18-202ENST00000378572 TSPY3P0CV98 308 aa16.25■□□□□ 0.19
PRPF18-202ENST00000378572 TSPY8P0CW00 308 aa16.25■□□□□ 0.19
PRPF18-202ENST00000378572 CHMLP26374 656 aa16.25■□□□□ 0.19
PRPF18-202ENST00000378572 IKQ13123 557 aaPredicted RBP16.25■□□□□ 0.19
PRPF18-202ENST00000378572 CHMP4CQ96CF2 233 aa16.25■□□□□ 0.19
PRPF18-202ENST00000378572 NAPBQ9H115 298 aa16.25■□□□□ 0.19
PRPF18-202ENST00000378572 NRBP1Q9UHY1 535 aa16.25■□□□□ 0.19
PRPF18-202ENST00000378572 ZHX1Q9UKY1 873 aaPredicted RBP16.25■□□□□ 0.19
PRPF18-202ENST00000378572 AKR1A1P14550 325 aa16.24■□□□□ 0.19
PRPF18-202ENST00000378572 TAL1P17542 331 aaPredicted RBP16.24■□□□□ 0.19
PRPF18-202ENST00000378572 PDE4BQ07343 736 aa16.24■□□□□ 0.19
PRPF18-202ENST00000378572 ZNF792Q3KQV3 632 aa16.24■□□□□ 0.19
PRPF18-202ENST00000378572 PRPF38AQ8NAV1 312 aaKnown RBP16.24■□□□□ 0.19
PRPF18-202ENST00000378572 REPS2Q8NFH8 660 aa16.24■□□□□ 0.19
PRPF18-202ENST00000378572 LENG1Q96BZ8 264 aaPredicted RBP16.24■□□□□ 0.19
PRPF18-202ENST00000378572 CEP95Q96GE4 821 aa16.24■□□□□ 0.19
PRPF18-202ENST00000378572 DNAH12Q6ZR08 3092 aa16.24■□□□□ 0.19
PRPF18-202ENST00000378572 IFNL3Q8IZI9 196 aa16.23■□□□□ 0.19
PRPF18-202ENST00000378572 SEC62Q99442 399 aaKnown RBP16.23■□□□□ 0.19
PRPF18-202ENST00000378572 RAVER2Q9HCJ3 691 aaKnown RBP16.23■□□□□ 0.19
PRPF18-202ENST00000378572 DIS3Q9Y2L1 958 aaKnown RBP16.23■□□□□ 0.19
PRPF18-202ENST00000378572 LTBP2Q14767 1821 aa16.23■□□□□ 0.19
PRPF18-202ENST00000378572 PATL2C9JE40 543 aaKnown RBP16.22■□□□□ 0.19
PRPF18-202ENST00000378572 TTLL1O95922 423 aa16.22■□□□□ 0.19
PRPF18-202ENST00000378572 ANKRD35Q8N283 1001 aa16.22■□□□□ 0.19
PRPF18-202ENST00000378572 FAM161BQ96MY7 647 aa16.22■□□□□ 0.19
PRPF18-202ENST00000378572 HOMER2Q9NSB8 354 aa16.22■□□□□ 0.19
PRPF18-202ENST00000378572 PQBP1O60828 265 aaKnown RBP16.22■□□□□ 0.19
PRPF18-202ENST00000378572 SEC24BO95487 1268 aa16.22■□□□□ 0.19
PRPF18-202ENST00000378572 SLFN13Q68D06 897 aa16.22■□□□□ 0.19
PRPF18-202ENST00000378572 BADQ92934 168 aa16.22■□□□□ 0.19
PRPF18-202ENST00000378572 UPF2Q9HAU5 1272 aaKnown RBP16.22■□□□□ 0.19
PRPF18-202ENST00000378572 PDLIM7Q9NR12 457 aa16.22■□□□□ 0.19
PRPF18-202ENST00000378572 MTMR4Q9NYA4 1195 aa16.22■□□□□ 0.19
PRPF18-202ENST00000378572 FEM1BQ9UK73 627 aa16.22■□□□□ 0.19
PRPF18-202ENST00000378572 PHF24Q9UPV7 400 aa16.22■□□□□ 0.19
PRPF18-202ENST00000378572 RIPK3Q9Y572 518 aa16.22■□□□□ 0.19
PRPF18-202ENST00000378572 TFAP4Q01664 338 aa16.21■□□□□ 0.19
PRPF18-202ENST00000378572 TLE2Q04725 743 aa16.21■□□□□ 0.19
PRPF18-202ENST00000378572 PPARAQ07869 468 aa16.21■□□□□ 0.19
PRPF18-202ENST00000378572 RUFY2Q8WXA3 655 aa16.21■□□□□ 0.19
PRPF18-202ENST00000378572 ESYT1Q9BSJ8 1104 aa16.21■□□□□ 0.19
PRPF18-202ENST00000378572 DIAPH3Q9NSV4 1193 aa16.21■□□□□ 0.19
PRPF18-202ENST00000378572 MTMR10Q9NXD2 777 aa16.21■□□□□ 0.19
PRPF18-202ENST00000378572 MTMR7Q9Y216 660 aa16.21■□□□□ 0.19
PRPF18-202ENST00000378572 RAD50Q92878 1312 aa16.2■□□□□ 0.18
PRPF18-202ENST00000378572 IGKV6D-41A0A0C4DH26 115 aa16.2■□□□□ 0.18
PRPF18-202ENST00000378572 A0A1W2PQ45 241 aaPredicted RBP16.2■□□□□ 0.18
PRPF18-202ENST00000378572 A0A1W2PQY0 241 aa16.2■□□□□ 0.18
PRPF18-202ENST00000378572 EPB41L2O43491 1005 aaKnown RBP16.2■□□□□ 0.18
PRPF18-202ENST00000378572 ZNF865P0CJ78 1059 aaPredicted RBP16.2■□□□□ 0.18
PRPF18-202ENST00000378572 BMP3P12645 472 aa16.2■□□□□ 0.18
PRPF18-202ENST00000378572 FBXO40Q9UH90 709 aa16.2■□□□□ 0.18
PRPF18-202ENST00000378572 FAM184BQ9ULE4 1060 aa16.2■□□□□ 0.18
PRPF18-202ENST00000378572 STXBP5LQ9Y2K9 1186 aa16.2■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 61.1 ms