RNA–Protein interactions for RNA: ENST00000378060.8

VPS36-201, Transcript of vacuolar protein sorting 36 homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS36, Length 4,417 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS36-201ENST00000378060 STIM2Q9P246 746 aa9.32□□□□□ -0.92
VPS36-201ENST00000378060 CRKLP46109 303 aaKnown RBP9.32□□□□□ -0.92
VPS36-201ENST00000378060 EZH2Q15910 746 aaKnown RBP9.32□□□□□ -0.92
VPS36-201ENST00000378060 TTLL7Q6ZT98 887 aa9.32□□□□□ -0.92
VPS36-201ENST00000378060 SYCE1Q8N0S2 351 aa9.32□□□□□ -0.92
VPS36-201ENST00000378060 WDR66Q8TBY9 1149 aa9.32□□□□□ -0.92
VPS36-201ENST00000378060 CABS1Q96KC9 395 aa9.32□□□□□ -0.92
VPS36-201ENST00000378060 CEP63Q96MT8 703 aa9.32□□□□□ -0.92
VPS36-201ENST00000378060 IFIH1Q9BYX4 1025 aaKnown RBP9.32□□□□□ -0.92
VPS36-201ENST00000378060 TRIM7Q9C029 511 aa9.32□□□□□ -0.92
VPS36-201ENST00000378060 KCNK9Q9NPC2 374 aa9.32□□□□□ -0.92
VPS36-201ENST00000378060 DTNBO60941 627 aa9.32□□□□□ -0.92
VPS36-201ENST00000378060 PPFIA4O75335 1185 aa9.32□□□□□ -0.92
VPS36-201ENST00000378060 EEF2P13639 858 aaKnown RBP9.32□□□□□ -0.92
VPS36-201ENST00000378060 TCP1P17987 556 aaKnown RBP9.32□□□□□ -0.92
VPS36-201ENST00000378060 NDUFA8P51970 172 aa9.32□□□□□ -0.92
VPS36-201ENST00000378060 IRX3P78415 501 aaPredicted RBP9.32□□□□□ -0.92
VPS36-201ENST00000378060 PICALMQ13492 652 aa9.32□□□□□ -0.92
VPS36-201ENST00000378060 PPP2R5EQ16537 467 aa9.32□□□□□ -0.92
VPS36-201ENST00000378060 CCDC25Q86WR0 208 aa9.32□□□□□ -0.92
VPS36-201ENST00000378060 TEX11Q8IYF3 940 aa9.32□□□□□ -0.92
VPS36-201ENST00000378060 MPHOSPH6Q99547 160 aaKnown RBP9.32□□□□□ -0.92
VPS36-201ENST00000378060 MYO1AQ9UBC5 1043 aa9.32□□□□□ -0.92
VPS36-201ENST00000378060 NSFL1CQ9UNZ2 370 aaKnown RBP9.32□□□□□ -0.92
VPS36-201ENST00000378060 COL5A3P25940 1745 aaPredicted RBP9.32□□□□□ -0.92
VPS36-201ENST00000378060 TAF1LQ8IZX4 1826 aa9.32□□□□□ -0.92
VPS36-201ENST00000378060 CALUO43852 315 aaPredicted RBP9.32□□□□□ -0.92
VPS36-201ENST00000378060 PPP6R2O75170 966 aa9.32□□□□□ -0.92
VPS36-201ENST00000378060 HPDP32754 393 aaPredicted RBP9.32□□□□□ -0.92
VPS36-201ENST00000378060 ADD1P35611 737 aaKnown RBP9.32□□□□□ -0.92
VPS36-201ENST00000378060 RPS6KA1Q15418 735 aa9.32□□□□□ -0.92
VPS36-201ENST00000378060 SPATS2Q86XZ4 545 aaKnown RBP9.32□□□□□ -0.92
VPS36-201ENST00000378060 UBL4BQ8N7F7 174 aa9.32□□□□□ -0.92
VPS36-201ENST00000378060 MSANTD4Q8NCY6 345 aa9.32□□□□□ -0.92
VPS36-201ENST00000378060 CACTINQ8WUQ7 758 aaKnown RBP9.32□□□□□ -0.92
VPS36-201ENST00000378060 CEP83Q9Y592 693 aa9.32□□□□□ -0.92
VPS36-201ENST00000378060 FGAP02671 866 aa9.31□□□□□ -0.92
VPS36-201ENST00000378060 VIMP08670 466 aaKnown RBP9.31□□□□□ -0.92
VPS36-201ENST00000378060 TXKP42681 527 aa9.31□□□□□ -0.92
VPS36-201ENST00000378060 MXRA7P84157 204 aa9.31□□□□□ -0.92
VPS36-201ENST00000378060 KLHL30Q0D2K2 578 aa9.31□□□□□ -0.92
VPS36-201ENST00000378060 SCRN1Q12765 414 aa9.31□□□□□ -0.92
VPS36-201ENST00000378060 SPATA24Q86W54 205 aa9.31□□□□□ -0.92
VPS36-201ENST00000378060 FANCBQ8NB91 859 aa9.31□□□□□ -0.92
VPS36-201ENST00000378060 CHAMP1Q96JM3 812 aa9.31□□□□□ -0.92
VPS36-201ENST00000378060 PPP1R1BQ9UD71 204 aaPredicted RBP9.31□□□□□ -0.92
VPS36-201ENST00000378060 CDC23Q9UJX2 597 aa9.31□□□□□ -0.92
VPS36-201ENST00000378060 TMEM110-MUSTN1A8MSY1 372 aa9.31□□□□□ -0.92
VPS36-201ENST00000378060 CCNT1O60563 726 aaKnown RBP9.31□□□□□ -0.92
VPS36-201ENST00000378060 GNA14O95837 355 aa9.31□□□□□ -0.92
VPS36-201ENST00000378060 ARID4AP29374 1257 aaPredicted RBP9.31□□□□□ -0.92
VPS36-201ENST00000378060 CTDSPL2Q05D32 466 aa9.31□□□□□ -0.92
VPS36-201ENST00000378060 HERC4Q5GLZ8 1057 aaPredicted RBP9.31□□□□□ -0.92
VPS36-201ENST00000378060 INTS8Q75QN2 995 aaKnown RBP9.31□□□□□ -0.92
VPS36-201ENST00000378060 LRP10Q7Z4F1 713 aa9.31□□□□□ -0.92
VPS36-201ENST00000378060 CABP7Q86V35 215 aa9.31□□□□□ -0.92
VPS36-201ENST00000378060 KIFAP3Q92845 792 aa9.31□□□□□ -0.92
VPS36-201ENST00000378060 GSDMAQ96QA5 445 aa9.31□□□□□ -0.92
VPS36-201ENST00000378060 SMIM23A6NLE4 172 aa9.31□□□□□ -0.92
VPS36-201ENST00000378060 KCNJ18B7U540 433 aa9.31□□□□□ -0.92
VPS36-201ENST00000378060 SPOPO43791 374 aa9.31□□□□□ -0.92
VPS36-201ENST00000378060 GTPBP6O43824 516 aaPredicted RBP9.31□□□□□ -0.92
VPS36-201ENST00000378060 CEP104O60308 925 aa9.31□□□□□ -0.92
VPS36-201ENST00000378060 PRDM1O75626 825 aa9.31□□□□□ -0.92
VPS36-201ENST00000378060 FERP16591 822 aa9.31□□□□□ -0.92
VPS36-201ENST00000378060 KCNJ12Q14500 433 aa9.31□□□□□ -0.92
VPS36-201ENST00000378060 SFMBT2Q5VUG0 894 aa9.31□□□□□ -0.92
VPS36-201ENST00000378060 INTS5Q6P9B9 1019 aaKnown RBP9.31□□□□□ -0.92
VPS36-201ENST00000378060 PPFIBP2Q8ND30 876 aa9.31□□□□□ -0.92
VPS36-201ENST00000378060 FAM71BQ8TC56 605 aa9.31□□□□□ -0.92
VPS36-201ENST00000378060 SNX29Q8TEQ0 813 aa9.31□□□□□ -0.92
VPS36-201ENST00000378060 PCDHA5Q9Y5H7 936 aa9.31□□□□□ -0.92
VPS36-201ENST00000378060 PCP11498 1178 aaKnown RBP9.3□□□□□ -0.92
VPS36-201ENST00000378060 DMTNQ08495 405 aa9.3□□□□□ -0.92
VPS36-201ENST00000378060 UBE3CQ15386 1083 aa9.3□□□□□ -0.92
VPS36-201ENST00000378060 ZMYM1Q5SVZ6 1142 aa9.3□□□□□ -0.92
VPS36-201ENST00000378060 TAOK1Q7L7X3 1001 aa9.3□□□□□ -0.92
VPS36-201ENST00000378060 RGS22Q8NE09 1264 aa9.3□□□□□ -0.92
VPS36-201ENST00000378060 NSUN7Q8NE18 718 aaKnown RBP9.3□□□□□ -0.92
VPS36-201ENST00000378060 SEC62Q99442 399 aaKnown RBP9.3□□□□□ -0.92
VPS36-201ENST00000378060 VPS54Q9P1Q0 977 aa9.3□□□□□ -0.92
VPS36-201ENST00000378060 PHLPP2Q6ZVD8 1323 aa9.3□□□□□ -0.92
VPS36-201ENST00000378060 TXNRD1Q16881 649 aa9.3□□□□□ -0.92
VPS36-201ENST00000378060 NT5C3AQ9H0P0 336 aa9.3□□□□□ -0.92
VPS36-201ENST00000378060 RTCBQ9Y3I0 505 aaKnown RBP9.3□□□□□ -0.92
VPS36-201ENST00000378060 HYOU1Q9Y4L1 999 aa9.3□□□□□ -0.92
VPS36-201ENST00000378060 CYP21A2P08686 494 aa9.3□□□□□ -0.92
VPS36-201ENST00000378060 APBA1Q02410 837 aa9.3□□□□□ -0.92
VPS36-201ENST00000378060 MORC3Q14149 939 aa9.3□□□□□ -0.92
VPS36-201ENST00000378060 GALNT17Q6IS24 598 aa9.3□□□□□ -0.92
VPS36-201ENST00000378060 SRGAP1Q7Z6B7 1085 aa9.3□□□□□ -0.92
VPS36-201ENST00000378060 OGFOD1Q8N543 542 aa9.3□□□□□ -0.92
VPS36-201ENST00000378060 GOLGA5Q8TBA6 731 aa9.3□□□□□ -0.92
VPS36-201ENST00000378060 TCHPQ9BT92 498 aa9.3□□□□□ -0.92
VPS36-201ENST00000378060 NRBP1Q9UHY1 535 aa9.3□□□□□ -0.92
VPS36-201ENST00000378060 EPN1Q9Y6I3 576 aaPredicted RBP9.3□□□□□ -0.92
VPS36-201ENST00000378060 PDE6AP16499 860 aa9.3□□□□□ -0.92
VPS36-201ENST00000378060 IFNL3Q8IZI9 196 aa9.3□□□□□ -0.92
VPS36-201ENST00000378060 PPP1R13BQ96KQ4 1090 aa9.3□□□□□ -0.92
VPS36-201ENST00000378060 PLCB1Q9NQ66 1216 aa9.3□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 108 ms