RNA–Protein interactions for RNA: ENST00000377036.2

DFFA-201, Transcript of DNA fragmentation factor subunit alpha, humanhuman

TSL 1 (best) BASIC

Gene DFFA, Length 1,403 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DFFA-201ENST00000377036 AKAP17AQ02040 695 aaKnown RBP20.02■□□□□ 0.8
DFFA-201ENST00000377036 SYDE2Q5VT97 1194 aa20.02■□□□□ 0.8
DFFA-201ENST00000377036 MB21D1Q8N884 522 aa20.02■□□□□ 0.8
DFFA-201ENST00000377036 FAM217BQ9NTX9 383 aaPredicted RBP20.02■□□□□ 0.8
DFFA-201ENST00000377036 PPP1R9AQ9ULJ8 1098 aa20.02■□□□□ 0.8
DFFA-201ENST00000377036 MYH4Q9Y623 1939 aa20.02■□□□□ 0.8
DFFA-201ENST00000377036 GOLGA8HP0CJ92 632 aa20.02■□□□□ 0.79
DFFA-201ENST00000377036 CDC27P30260 824 aa20.02■□□□□ 0.79
DFFA-201ENST00000377036 ADD1P35611 737 aaKnown RBP20.02■□□□□ 0.79
DFFA-201ENST00000377036 TM4SF4P48230 202 aa20.02■□□□□ 0.79
DFFA-201ENST00000377036 TREML2Q5T2D2 321 aa20.02■□□□□ 0.79
DFFA-201ENST00000377036 GPAT2Q6NUI2 795 aa20.02■□□□□ 0.79
DFFA-201ENST00000377036 RAB11FIP4Q86YS3 637 aa20.02■□□□□ 0.79
DFFA-201ENST00000377036 STAG2Q8N3U4 1231 aa20.02■□□□□ 0.79
DFFA-201ENST00000377036 PARK7Q99497 189 aaKnown RBP20.02■□□□□ 0.79
DFFA-201ENST00000377036 RIOX1Q9H6W3 641 aa20.02■□□□□ 0.79
DFFA-201ENST00000377036 KIF3AQ9Y496 699 aa20.02■□□□□ 0.79
DFFA-201ENST00000377036 WDR33Q9C0J8 1336 aaKnown RBP20.01■□□□□ 0.79
DFFA-201ENST00000377036 BTBD19C9JJ37 291 aa20.01■□□□□ 0.79
DFFA-201ENST00000377036 HMGN5P82970 282 aaKnown RBP20.01■□□□□ 0.79
DFFA-201ENST00000377036 GRM1Q13255 1194 aa20.01■□□□□ 0.79
DFFA-201ENST00000377036 LBX2Q6XYB7 198 aa20.01■□□□□ 0.79
DFFA-201ENST00000377036 NECAB1Q8N987 351 aa20.01■□□□□ 0.79
DFFA-201ENST00000377036 RRP36Q96EU6 259 aaKnown RBP20.01■□□□□ 0.79
DFFA-201ENST00000377036 INTS4Q96HW7 963 aaKnown RBP20.01■□□□□ 0.79
DFFA-201ENST00000377036 RNF26Q9BY78 433 aaPredicted RBP20.01■□□□□ 0.79
DFFA-201ENST00000377036 NCOA5Q9HCD5 579 aaKnown RBP20.01■□□□□ 0.79
DFFA-201ENST00000377036 SEC63Q9UGP8 760 aaKnown RBP20.01■□□□□ 0.79
DFFA-201ENST00000377036 RBM19Q9Y4C8 960 aaKnown RBP20.01■□□□□ 0.79
DFFA-201ENST00000377036 CTDP1Q9Y5B0 961 aaPredicted RBP20.01■□□□□ 0.79
DFFA-201ENST00000377036 PDHXO00330 501 aa20■□□□□ 0.79
DFFA-201ENST00000377036 LARGE1O95461 756 aa20■□□□□ 0.79
DFFA-201ENST00000377036 HSP90AA1P07900 732 aaKnown RBP20■□□□□ 0.79
DFFA-201ENST00000377036 DSG3P32926 999 aa20■□□□□ 0.79
DFFA-201ENST00000377036 KIF23Q02241 960 aaPredicted RBP20■□□□□ 0.79
DFFA-201ENST00000377036 CUL4AQ13619 759 aa20■□□□□ 0.79
DFFA-201ENST00000377036 CCDC83Q8IWF9 413 aa20■□□□□ 0.79
DFFA-201ENST00000377036 KIFC2Q96AC6 838 aa20■□□□□ 0.79
DFFA-201ENST00000377036 ASCC2Q9H1I8 757 aaPredicted RBP20■□□□□ 0.79
DFFA-201ENST00000377036 DAXXQ9UER7 740 aaPredicted RBP20■□□□□ 0.79
DFFA-201ENST00000377036 ZBED4O75132 1171 aa19.99■□□□□ 0.79
DFFA-201ENST00000377036 PLEKHA8P1O95397 391 aa19.99■□□□□ 0.79
DFFA-201ENST00000377036 GCLCP48506 637 aaPredicted RBP19.99■□□□□ 0.79
DFFA-201ENST00000377036 SSRP1Q08945 709 aaKnown RBP19.99■□□□□ 0.79
DFFA-201ENST00000377036 DGKZQ13574 1117 aa19.99■□□□□ 0.79
DFFA-201ENST00000377036 NTRK3Q16288 839 aa19.99■□□□□ 0.79
DFFA-201ENST00000377036 TTBK2Q6IQ55 1244 aa19.99■□□□□ 0.79
DFFA-201ENST00000377036 IFNL1Q8IU54 200 aa19.99■□□□□ 0.79
DFFA-201ENST00000377036 ADGRF4Q8IZF3 695 aa19.99■□□□□ 0.79
DFFA-201ENST00000377036 SRBD1Q8N5C6 995 aaKnown RBP19.99■□□□□ 0.79
DFFA-201ENST00000377036 WASF1Q92558 559 aa19.99■□□□□ 0.79
DFFA-201ENST00000377036 PRR12Q9ULL5 1215 aa19.99■□□□□ 0.79
DFFA-201ENST00000377036 STK36Q9NRP7 1315 aa19.98■□□□□ 0.79
DFFA-201ENST00000377036 LOC285556D6RIA3 1793 aa19.98■□□□□ 0.79
DFFA-201ENST00000377036 PRPF3O43395 683 aaKnown RBP19.98■□□□□ 0.79
DFFA-201ENST00000377036 SLC16A2P36021 539 aa19.98■□□□□ 0.79
DFFA-201ENST00000377036 VEGFBP49765 207 aa19.98■□□□□ 0.79
DFFA-201ENST00000377036 OAZ1P54368 228 aa19.98■□□□□ 0.79
DFFA-201ENST00000377036 FUT2Q10981 343 aa19.98■□□□□ 0.79
DFFA-201ENST00000377036 RASGRP2Q7LDG7 609 aa19.98■□□□□ 0.79
DFFA-201ENST00000377036 FAM177A1Q8N128 213 aaPredicted RBP19.98■□□□□ 0.79
DFFA-201ENST00000377036 SMCR8Q8TEV9 937 aaPredicted RBP19.98■□□□□ 0.79
DFFA-201ENST00000377036 MTMR8Q96EF0 704 aa19.98■□□□□ 0.79
DFFA-201ENST00000377036 UBA5Q9GZZ9 404 aa19.98■□□□□ 0.79
DFFA-201ENST00000377036 ADAMTS5Q9UNA0 930 aa19.98■□□□□ 0.79
DFFA-201ENST00000377036 PNMA6FA0A0J9YX94 578 aa19.97■□□□□ 0.79
DFFA-201ENST00000377036 hCG_1984214I3L0E3 225 aa19.97■□□□□ 0.79
DFFA-201ENST00000377036 VWA5AO00534 786 aa19.97■□□□□ 0.79
DFFA-201ENST00000377036 ZBTB5O15062 677 aa19.97■□□□□ 0.79
DFFA-201ENST00000377036 FMNL1O95466 1100 aaPredicted RBP19.97■□□□□ 0.79
DFFA-201ENST00000377036 ZNF713Q8N859 430 aaPredicted RBP19.97■□□□□ 0.79
DFFA-201ENST00000377036 PTPN18Q99952 460 aa19.97■□□□□ 0.79
DFFA-201ENST00000377036 JMJD4Q9H9V9 463 aa19.97■□□□□ 0.79
DFFA-201ENST00000377036 FBXO28Q9NVF7 368 aa19.97■□□□□ 0.79
DFFA-201ENST00000377036 SPDYE16A6NNV3 312 aaPredicted RBP19.96■□□□□ 0.79
DFFA-201ENST00000377036 DEXIO95424 95 aa19.96■□□□□ 0.79
DFFA-201ENST00000377036 HERVK_113P62684 666 aa19.96■□□□□ 0.79
DFFA-201ENST00000377036 FAM43AQ8N2R8 423 aa19.96■□□□□ 0.79
DFFA-201ENST00000377036 NSUN7Q8NE18 718 aaKnown RBP19.96■□□□□ 0.79
DFFA-201ENST00000377036 RANBP17Q9H2T7 1088 aaKnown RBP19.96■□□□□ 0.79
DFFA-201ENST00000377036 SLC38A10Q9HBR0 1119 aa19.96■□□□□ 0.79
DFFA-201ENST00000377036 CNTNAP5Q8WYK1 1306 aa19.96■□□□□ 0.79
DFFA-201ENST00000377036 PTPDC1A2A3K4 754 aa19.95■□□□□ 0.78
DFFA-201ENST00000377036 ATP2A1O14983 1001 aa19.95■□□□□ 0.78
DFFA-201ENST00000377036 CYTH3O43739 400 aa19.95■□□□□ 0.78
DFFA-201ENST00000377036 COPB2P35606 906 aa19.95■□□□□ 0.78
DFFA-201ENST00000377036 NBPF11Q86T75 865 aa19.95■□□□□ 0.78
DFFA-201ENST00000377036 CCDC82Q8N4S0 544 aa19.95■□□□□ 0.78
DFFA-201ENST00000377036 P2RX7Q99572 595 aaKnown RBP19.95■□□□□ 0.78
DFFA-201ENST00000377036 SLC26A6Q9BXS9 759 aa19.95■□□□□ 0.78
DFFA-201ENST00000377036 ZFYVE28Q9HCC9 887 aa19.95■□□□□ 0.78
DFFA-201ENST00000377036 VAT1LQ9HCJ6 419 aa19.95■□□□□ 0.78
DFFA-201ENST00000377036 SMC3Q9UQE7 1217 aa19.95■□□□□ 0.78
DFFA-201ENST00000377036 RABGAP1Q9Y3P9 1069 aa19.95■□□□□ 0.78
DFFA-201ENST00000377036 V9GY48 417 aaPredicted RBP19.95■□□□□ 0.78
DFFA-201ENST00000377036 IGF2BP3O00425 579 aaKnown RBP eCLIP19.94■□□□□ 0.78
DFFA-201ENST00000377036 PDIA4P13667 645 aaKnown RBP19.94■□□□□ 0.78
DFFA-201ENST00000377036 XBP1P17861 261 aa19.94■□□□□ 0.78
DFFA-201ENST00000377036 TAF1CQ15572 869 aaPredicted RBP19.94■□□□□ 0.78
DFFA-201ENST00000377036 CDC37Q16543 378 aaPredicted RBP19.94■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms