RNA–Protein interactions for RNA: ENST00000375703.7

MSH5-201, Transcript of mutS homolog 5, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene MSH5, Length 2,708 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-201ENST00000375703 PNMA1Q8ND90 353 aa16.39■□□□□ 0.22
MSH5-201ENST00000375703 RASSF8Q8NHQ8 419 aa16.39■□□□□ 0.22
MSH5-201ENST00000375703 DISC1Q9NRI5 854 aa16.39■□□□□ 0.22
MSH5-201ENST00000375703 JAG2Q9Y219 1238 aa16.39■□□□□ 0.22
MSH5-201ENST00000375703 TAF1P21675 1872 aa16.39■□□□□ 0.21
MSH5-201ENST00000375703 PARP1P09874 1014 aaKnown RBP16.39■□□□□ 0.21
MSH5-201ENST00000375703 OAS2P29728 719 aaKnown RBP16.39■□□□□ 0.21
MSH5-201ENST00000375703 TUBB4BP68371 445 aa16.39■□□□□ 0.21
MSH5-201ENST00000375703 LINC00116Q8NCU8 138 aa16.39■□□□□ 0.21
MSH5-201ENST00000375703 SLF1Q9BQI6 1058 aa16.39■□□□□ 0.21
MSH5-201ENST00000375703 IL17RBQ9NRM6 502 aa16.39■□□□□ 0.21
MSH5-201ENST00000375703 DLEC1Q9Y238 1755 aa16.39■□□□□ 0.21
MSH5-201ENST00000375703 ADSSL1Q8N142 457 aa16.39■□□□□ 0.21
MSH5-201ENST00000375703 NAPGQ99747 312 aaPredicted RBP16.39■□□□□ 0.21
MSH5-201ENST00000375703 ANKZF1Q9H8Y5 726 aa16.39■□□□□ 0.21
MSH5-201ENST00000375703 ZKSCAN7Q9P0L1 754 aaPredicted RBP16.39■□□□□ 0.21
MSH5-201ENST00000375703 RREB1Q92766 1687 aa16.38■□□□□ 0.21
MSH5-201ENST00000375703 POTEB2H3BUK9 544 aa16.38■□□□□ 0.21
MSH5-201ENST00000375703 KCNQ4P56696 695 aa16.38■□□□□ 0.21
MSH5-201ENST00000375703 SMIM5Q71RC9 77 aa16.38■□□□□ 0.21
MSH5-201ENST00000375703 DZIP1Q86YF9 867 aaKnown RBP16.38■□□□□ 0.21
MSH5-201ENST00000375703 IRF2BP1Q8IU81 584 aa16.38■□□□□ 0.21
MSH5-201ENST00000375703 MYO1AQ9UBC5 1043 aa16.38■□□□□ 0.21
MSH5-201ENST00000375703 TRIM49BA6NDI0 452 aa16.38■□□□□ 0.21
MSH5-201ENST00000375703 UBA7P41226 1012 aa16.38■□□□□ 0.21
MSH5-201ENST00000375703 ARHGAP25P42331 645 aa16.38■□□□□ 0.21
MSH5-201ENST00000375703 USP5P45974 858 aa16.38■□□□□ 0.21
MSH5-201ENST00000375703 GNAQP50148 359 aa16.38■□□□□ 0.21
MSH5-201ENST00000375703 C12orf60Q5U649 245 aa16.38■□□□□ 0.21
MSH5-201ENST00000375703 SPTY2D1Q68D10 685 aaPredicted RBP16.38■□□□□ 0.21
MSH5-201ENST00000375703 CHP1Q99653 195 aa16.38■□□□□ 0.21
MSH5-201ENST00000375703 MKNK2Q9HBH9 465 aa16.38■□□□□ 0.21
MSH5-201ENST00000375703 EPN1Q9Y6I3 576 aaPredicted RBP16.38■□□□□ 0.21
MSH5-201ENST00000375703 PES1O00541 588 aaKnown RBP16.37■□□□□ 0.21
MSH5-201ENST00000375703 NAALADL2Q58DX5 795 aa16.37■□□□□ 0.21
MSH5-201ENST00000375703 MB21D1Q8N884 522 aa16.37■□□□□ 0.21
MSH5-201ENST00000375703 DYNLL2Q96FJ2 89 aa16.37■□□□□ 0.21
MSH5-201ENST00000375703 NYXQ9GZU5 481 aa16.37■□□□□ 0.21
MSH5-201ENST00000375703 PCDHA6Q9UN73 950 aa16.37■□□□□ 0.21
MSH5-201ENST00000375703 PCDHA8Q9Y5H6 950 aa16.37■□□□□ 0.21
MSH5-201ENST00000375703 PP2D1A8MPX8 630 aa16.37■□□□□ 0.21
MSH5-201ENST00000375703 TYW1BQ6NUM6 668 aa16.37■□□□□ 0.21
MSH5-201ENST00000375703 TXNRD3Q86VQ6 643 aa16.37■□□□□ 0.21
MSH5-201ENST00000375703 OR8K1Q8NGG5 319 aa16.37■□□□□ 0.21
MSH5-201ENST00000375703 HNRNPLLQ8WVV9 542 aaKnown RBP16.37■□□□□ 0.21
MSH5-201ENST00000375703 BBXQ8WY36 941 aaPredicted RBP16.37■□□□□ 0.21
MSH5-201ENST00000375703 ANKS1AQ92625 1134 aa16.37■□□□□ 0.21
MSH5-201ENST00000375703 PLIN2Q99541 437 aa16.37■□□□□ 0.21
MSH5-201ENST00000375703 TMEM60Q9H2L4 133 aa16.37■□□□□ 0.21
MSH5-201ENST00000375703 MAD2L2Q9UI95 211 aa16.37■□□□□ 0.21
MSH5-201ENST00000375703 COL16A1Q07092 1604 aaPredicted RBP16.37■□□□□ 0.21
MSH5-201ENST00000375703 A0A1B0GUL6 1792 aa16.36■□□□□ 0.21
MSH5-201ENST00000375703 TTC26A0AVF1 554 aa16.36■□□□□ 0.21
MSH5-201ENST00000375703 M0R2N6 131 aa16.36■□□□□ 0.21
MSH5-201ENST00000375703 PIP4K2BP78356 416 aa16.36■□□□□ 0.21
MSH5-201ENST00000375703 STIM1Q13586 685 aa16.36■□□□□ 0.21
MSH5-201ENST00000375703 KCNB1Q14721 858 aa16.36■□□□□ 0.21
MSH5-201ENST00000375703 GRM4Q14833 912 aa16.36■□□□□ 0.21
MSH5-201ENST00000375703 INF2Q27J81 1249 aa16.36■□□□□ 0.21
MSH5-201ENST00000375703 TMED8Q6PL24 325 aaPredicted RBP16.36■□□□□ 0.21
MSH5-201ENST00000375703 SETDB2Q96T68 719 aa16.36■□□□□ 0.21
MSH5-201ENST00000375703 LUC7L2Q9Y383 392 aaKnown RBP16.36■□□□□ 0.21
MSH5-201ENST00000375703 PMS1P54277 932 aaKnown RBP16.36■□□□□ 0.21
MSH5-201ENST00000375703 WHAMMP3Q1A5X7 153 aa16.36■□□□□ 0.21
MSH5-201ENST00000375703 TSR1Q2NL82 804 aaKnown RBP16.36■□□□□ 0.21
MSH5-201ENST00000375703 AEBP2Q6ZN18 517 aaPredicted RBP16.36■□□□□ 0.21
MSH5-201ENST00000375703 HEATR3Q7Z4Q2 680 aa16.36■□□□□ 0.21
MSH5-201ENST00000375703 NBPF5PQ86XG9 351 aaPredicted RBP16.36■□□□□ 0.21
MSH5-201ENST00000375703 CCDC24Q8N4L8 307 aa16.36■□□□□ 0.21
MSH5-201ENST00000375703 MSANTD4Q8NCY6 345 aa16.36■□□□□ 0.21
MSH5-201ENST00000375703 RAB21Q9UL25 225 aa16.36■□□□□ 0.21
MSH5-201ENST00000375703 MTMR7Q9Y216 660 aa16.36■□□□□ 0.21
MSH5-201ENST00000375703 MYH13Q9UKX3 1938 aa16.35■□□□□ 0.21
MSH5-201ENST00000375703 CTAGE15A4D2H0 777 aa16.35■□□□□ 0.21
MSH5-201ENST00000375703 USP17L3A6NCW0 530 aa16.35■□□□□ 0.21
MSH5-201ENST00000375703 USP17L4A6NCW7 530 aa16.35■□□□□ 0.21
MSH5-201ENST00000375703 MAP2K7O14733 419 aa16.35■□□□□ 0.21
MSH5-201ENST00000375703 NDUFA10O95299 355 aa16.35■□□□□ 0.21
MSH5-201ENST00000375703 TFRCP02786 760 aaKnown RBP16.35■□□□□ 0.21
MSH5-201ENST00000375703 CTAGE8P0CG41 777 aa16.35■□□□□ 0.21
MSH5-201ENST00000375703 USP17L1Q7RTZ2 530 aa16.35■□□□□ 0.21
MSH5-201ENST00000375703 CTAGE6Q86UF2 777 aa16.35■□□□□ 0.21
MSH5-201ENST00000375703 CTAGE4Q8IX94 777 aa16.35■□□□□ 0.21
MSH5-201ENST00000375703 CCDC148Q8NFR7 591 aa16.35■□□□□ 0.21
MSH5-201ENST00000375703 PNKPQ96T60 521 aa16.35■□□□□ 0.21
MSH5-201ENST00000375703 ERLIN1O75477 346 aa16.35■□□□□ 0.21
MSH5-201ENST00000375703 MYL1P05976 194 aa16.35■□□□□ 0.21
MSH5-201ENST00000375703 TSPY3P0CV98 308 aa16.35■□□□□ 0.21
MSH5-201ENST00000375703 TSPY8P0CW00 308 aa16.35■□□□□ 0.21
MSH5-201ENST00000375703 EEF1GP26641 437 aaKnown RBP16.35■□□□□ 0.21
MSH5-201ENST00000375703 CCDC178Q5BJE1 867 aa16.35■□□□□ 0.21
MSH5-201ENST00000375703 BEND6Q5SZJ8 279 aaPredicted RBP16.35■□□□□ 0.21
MSH5-201ENST00000375703 GALNT17Q6IS24 598 aa16.35■□□□□ 0.21
MSH5-201ENST00000375703 ZNF444Q8N0Y2 327 aaPredicted RBP16.35■□□□□ 0.21
MSH5-201ENST00000375703 TRIM47Q96LD4 638 aa16.35■□□□□ 0.21
MSH5-201ENST00000375703 CCSER1Q9C0I3 900 aa16.35■□□□□ 0.21
MSH5-201ENST00000375703 THAP9Q9H5L6 903 aa16.35■□□□□ 0.21
MSH5-201ENST00000375703 MAGEC2Q9UBF1 373 aaPredicted RBP16.35■□□□□ 0.21
MSH5-201ENST00000375703 MKRN1Q9UHC7 482 aaKnown RBP16.35■□□□□ 0.21
MSH5-201ENST00000375703 MYO6Q9UM54 1294 aa16.35■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms