RNA–Protein interactions for RNA: ENST00000372276.7

CD40-201, Transcript of CD40 molecule, humanhuman

TSL 1 (best) BASIC

Gene CD40, Length 1,623 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD40-201ENST00000372276 SAMSN1Q9NSI8 373 aaKnown RBP20.44■□□□□ 0.86
CD40-201ENST00000372276 GAKO14976 1311 aa20.44■□□□□ 0.86
CD40-201ENST00000372276 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP20.43■□□□□ 0.86
CD40-201ENST00000372276 PARP1P09874 1014 aaKnown RBP20.43■□□□□ 0.86
CD40-201ENST00000372276 STAT6P42226 847 aa20.43■□□□□ 0.86
CD40-201ENST00000372276 NOVP48745 357 aa20.43■□□□□ 0.86
CD40-201ENST00000372276 CDK8P49336 464 aa20.43■□□□□ 0.86
CD40-201ENST00000372276 STIM1Q13586 685 aa20.43■□□□□ 0.86
CD40-201ENST00000372276 CCDC93Q567U6 631 aa20.43■□□□□ 0.86
CD40-201ENST00000372276 SYT10Q6XYQ8 523 aa20.43■□□□□ 0.86
CD40-201ENST00000372276 TMEM139Q8IV31 216 aa20.43■□□□□ 0.86
CD40-201ENST00000372276 CNGA4Q8IV77 575 aa20.43■□□□□ 0.86
CD40-201ENST00000372276 ZNF397Q8NF99 534 aaPredicted RBP20.43■□□□□ 0.86
CD40-201ENST00000372276 RRP36Q96EU6 259 aaKnown RBP20.43■□□□□ 0.86
CD40-201ENST00000372276 DYNLL2Q96FJ2 89 aa20.43■□□□□ 0.86
CD40-201ENST00000372276 EYA3Q99504 573 aa20.43■□□□□ 0.86
CD40-201ENST00000372276 ZMYND12Q9H0C1 365 aa20.43■□□□□ 0.86
CD40-201ENST00000372276 ADD3Q9UEY8 706 aaKnown RBP20.43■□□□□ 0.86
CD40-201ENST00000372276 LIMA1Q9UHB6 759 aaKnown RBP20.43■□□□□ 0.86
CD40-201ENST00000372276 PCDHA6Q9UN73 950 aa20.43■□□□□ 0.86
CD40-201ENST00000372276 PPP2R2CQ9Y2T4 447 aa20.43■□□□□ 0.86
CD40-201ENST00000372276 PCDHA8Q9Y5H6 950 aa20.43■□□□□ 0.86
CD40-201ENST00000372276 KLRG2A4D1S0 409 aaPredicted RBP20.42■□□□□ 0.86
CD40-201ENST00000372276 KLRF2D3W0D1 207 aa20.42■□□□□ 0.86
CD40-201ENST00000372276 H7C1D1 291 aa20.42■□□□□ 0.86
CD40-201ENST00000372276 STXBP3O00186 592 aa20.42■□□□□ 0.86
CD40-201ENST00000372276 DIXDC1Q155Q3 683 aa20.42■□□□□ 0.86
CD40-201ENST00000372276 WWC2Q6AWC2 1192 aa20.42■□□□□ 0.86
CD40-201ENST00000372276 REXO1L1PQ8IX06 675 aa20.42■□□□□ 0.86
CD40-201ENST00000372276 TRMT44Q8IYL2 757 aaKnown RBP20.42■□□□□ 0.86
CD40-201ENST00000372276 DISC1Q9NRI5 854 aa20.42■□□□□ 0.86
CD40-201ENST00000372276 SEC63Q9UGP8 760 aaKnown RBP20.42■□□□□ 0.86
CD40-201ENST00000372276 STX8Q9UNK0 236 aa20.42■□□□□ 0.86
CD40-201ENST00000372276 ESYT2A0FGR8 921 aa20.42■□□□□ 0.86
CD40-201ENST00000372276 RPN1P04843 607 aaKnown RBP20.42■□□□□ 0.86
CD40-201ENST00000372276 GYS1P13807 737 aa20.42■□□□□ 0.86
CD40-201ENST00000372276 UBA7P41226 1012 aa20.42■□□□□ 0.86
CD40-201ENST00000372276 PAK1Q13153 545 aa20.42■□□□□ 0.86
CD40-201ENST00000372276 SOGA3Q5TF21 947 aa20.42■□□□□ 0.86
CD40-201ENST00000372276 RRAGBQ5VZM2 374 aa20.42■□□□□ 0.86
CD40-201ENST00000372276 MAPKAPK5Q8IW41 473 aa20.42■□□□□ 0.86
CD40-201ENST00000372276 NOC3LQ8WTT2 800 aaKnown RBP20.42■□□□□ 0.86
CD40-201ENST00000372276 MED15Q96RN5 788 aa20.42■□□□□ 0.86
CD40-201ENST00000372276 ZNF215Q9UL58 517 aaPredicted RBP20.42■□□□□ 0.86
CD40-201ENST00000372276 TNS1Q9HBL0 1735 aaKnown RBP20.41■□□□□ 0.86
CD40-201ENST00000372276 UBR3Q6ZT12 1888 aa20.41■□□□□ 0.86
CD40-201ENST00000372276 USP17L3A6NCW0 530 aa20.41■□□□□ 0.86
CD40-201ENST00000372276 USP17L4A6NCW7 530 aa20.41■□□□□ 0.86
CD40-201ENST00000372276 PBX1P40424 430 aa20.41■□□□□ 0.86
CD40-201ENST00000372276 EVX2Q03828 476 aa20.41■□□□□ 0.86
CD40-201ENST00000372276 USP17L1Q7RTZ2 530 aa20.41■□□□□ 0.86
CD40-201ENST00000372276 HEATR3Q7Z4Q2 680 aa20.41■□□□□ 0.86
CD40-201ENST00000372276 AMIGO3Q86WK7 504 aa20.41■□□□□ 0.86
CD40-201ENST00000372276 SP8Q8IXZ3 490 aa20.41■□□□□ 0.86
CD40-201ENST00000372276 STAG2Q8N3U4 1231 aa20.41■□□□□ 0.86
CD40-201ENST00000372276 PLIN4Q96Q06 1357 aa20.41■□□□□ 0.86
CD40-201ENST00000372276 JAG2Q9Y219 1238 aa20.41■□□□□ 0.86
CD40-201ENST00000372276 MYO3BQ8WXR4 1341 aa20.4■□□□□ 0.86
CD40-201ENST00000372276 WNT7AO00755 349 aa20.4■□□□□ 0.86
CD40-201ENST00000372276 TUBB2AQ13885 445 aa20.4■□□□□ 0.86
CD40-201ENST00000372276 NONOQ15233 471 aaKnown RBP eCLIP20.4■□□□□ 0.86
CD40-201ENST00000372276 KLHL10Q6JEL2 608 aa20.4■□□□□ 0.86
CD40-201ENST00000372276 APTXQ7Z2E3 356 aaKnown RBP20.4■□□□□ 0.86
CD40-201ENST00000372276 IGSF22Q8N9C0 903 aa20.4■□□□□ 0.86
CD40-201ENST00000372276 TUBB2BQ9BVA1 445 aa20.4■□□□□ 0.86
CD40-201ENST00000372276 COA1Q9GZY4 146 aa20.4■□□□□ 0.86
CD40-201ENST00000372276 CDK5RAP2Q96SN8 1893 aa20.4■□□□□ 0.86
CD40-201ENST00000372276 DDX60LQ5H9U9 1706 aaKnown RBP20.4■□□□□ 0.86
CD40-201ENST00000372276 C10orf71Q711Q0 1435 aa20.39■□□□□ 0.86
CD40-201ENST00000372276 FLT1P17948 1338 aa20.39■□□□□ 0.86
CD40-201ENST00000372276 CCDC175P0C221 793 aa20.39■□□□□ 0.86
CD40-201ENST00000372276 CD44P16070 742 aaKnown RBP20.39■□□□□ 0.86
CD40-201ENST00000372276 BAG6P46379 1132 aa20.39■□□□□ 0.86
CD40-201ENST00000372276 IL17AQ16552 155 aa20.39■□□□□ 0.86
CD40-201ENST00000372276 NOM1Q5C9Z4 860 aaKnown RBP20.39■□□□□ 0.86
CD40-201ENST00000372276 MFSD14BQ5SR56 506 aa20.39■□□□□ 0.86
CD40-201ENST00000372276 TRIM65Q6PJ69 517 aa20.39■□□□□ 0.86
CD40-201ENST00000372276 SMAP1Q8IYB5 467 aaPredicted RBP20.39■□□□□ 0.86
CD40-201ENST00000372276 TBC1D16Q8TBP0 767 aa20.39■□□□□ 0.86
CD40-201ENST00000372276 GPKOWQ92917 476 aaPredicted RBP eCLIP20.39■□□□□ 0.86
CD40-201ENST00000372276 OGFRQ9NZT2 677 aa20.39■□□□□ 0.86
CD40-201ENST00000372276 DNAI1Q9UI46 699 aa20.39■□□□□ 0.86
CD40-201ENST00000372276 BAZ2BQ9UIF8 2168 aaKnown RBP20.39■□□□□ 0.85
CD40-201ENST00000372276 APBA3O96018 575 aa20.38■□□□□ 0.85
CD40-201ENST00000372276 NAPAP54920 295 aa20.38■□□□□ 0.85
CD40-201ENST00000372276 AMPD3Q01432 767 aa20.38■□□□□ 0.85
CD40-201ENST00000372276 SWAP70Q9UH65 585 aa20.38■□□□□ 0.85
CD40-201ENST00000372276 MYH1P12882 1939 aa20.38■□□□□ 0.85
CD40-201ENST00000372276 FECHP22830 423 aa20.38■□□□□ 0.85
CD40-201ENST00000372276 RHBDL3P58872 404 aa20.38■□□□□ 0.85
CD40-201ENST00000372276 TUBB4BP68371 445 aa20.38■□□□□ 0.85
CD40-201ENST00000372276 ASPRV1Q53RT3 343 aa20.38■□□□□ 0.85
CD40-201ENST00000372276 RASSF8Q8NHQ8 419 aa20.38■□□□□ 0.85
CD40-201ENST00000372276 CTNND2Q9UQB3 1225 aa20.38■□□□□ 0.85
CD40-201ENST00000372276 CYTH3O43739 400 aa20.37■□□□□ 0.85
CD40-201ENST00000372276 OR52Z1P0C646 297 aa20.37■□□□□ 0.85
CD40-201ENST00000372276 EEF1GP26641 437 aaKnown RBP20.37■□□□□ 0.85
CD40-201ENST00000372276 CASQ1P31415 396 aa20.37■□□□□ 0.85
CD40-201ENST00000372276 DEFB132Q7Z7B7 95 aa20.37■□□□□ 0.85
CD40-201ENST00000372276 TMTC1Q8IUR5 882 aa20.37■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms