RNA–Protein interactions for RNA: ENST00000371937.8

ATPAF1-202, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ATPAF1, Length 1,827 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-202ENST00000371937 CTNND1O60716 968 aaKnown RBP30.19■■■□□ 2.42
ATPAF1-202ENST00000371937 NAPAP54920 295 aa30.19■■■□□ 2.42
ATPAF1-202ENST00000371937 ZSCAN23Q3MJ62 389 aa30.19■■■□□ 2.42
ATPAF1-202ENST00000371937 JMYQ8N9B5 988 aa30.19■■■□□ 2.42
ATPAF1-202ENST00000371937 BICD2Q8TD16 824 aa30.19■■■□□ 2.42
ATPAF1-202ENST00000371937 NOL7Q9UMY1 257 aaKnown RBP30.19■■■□□ 2.42
ATPAF1-202ENST00000371937 TYW1BQ6NUM6 668 aa30.18■■■□□ 2.42
ATPAF1-202ENST00000371937 SRCAPQ6ZRS2 3230 aa30.18■■■□□ 2.42
ATPAF1-202ENST00000371937 BMP3P12645 472 aa30.17■■■□□ 2.42
ATPAF1-202ENST00000371937 TOB1P50616 345 aaPredicted RBP30.17■■■□□ 2.42
ATPAF1-202ENST00000371937 ZMYND12Q9H0C1 365 aa30.17■■■□□ 2.42
ATPAF1-202ENST00000371937 ZC3H4Q9UPT8 1303 aaKnown RBP30.17■■■□□ 2.42
ATPAF1-202ENST00000371937 GNA11P29992 359 aa30.17■■■□□ 2.42
ATPAF1-202ENST00000371937 SLC16A2P36021 539 aa30.17■■■□□ 2.42
ATPAF1-202ENST00000371937 ECE1P42892 770 aa30.17■■■□□ 2.42
ATPAF1-202ENST00000371937 ADALQ6DHV7 355 aa30.17■■■□□ 2.42
ATPAF1-202ENST00000371937 ACER1Q8TDN7 264 aa30.17■■■□□ 2.42
ATPAF1-202ENST00000371937 MTMR8Q96EF0 704 aa30.17■■■□□ 2.42
ATPAF1-202ENST00000371937 ZNF341Q9BYN7 854 aa30.17■■■□□ 2.42
ATPAF1-202ENST00000371937 C6orf50Q9HD87 102 aa30.17■■■□□ 2.42
ATPAF1-202ENST00000371937 PCDHA7Q9UN72 937 aa30.17■■■□□ 2.42
ATPAF1-202ENST00000371937 CEP131Q9UPN4 1083 aa30.17■■■□□ 2.42
ATPAF1-202ENST00000371937 PPP6R2O75170 966 aa30.16■■■□□ 2.42
ATPAF1-202ENST00000371937 CCDC183Q5T5S1 534 aa30.16■■■□□ 2.42
ATPAF1-202ENST00000371937 ZBTB5O15062 677 aa30.15■■■□□ 2.42
ATPAF1-202ENST00000371937 PTPAQ15257 358 aa30.15■■■□□ 2.42
ATPAF1-202ENST00000371937 EIF4ENIF1Q9NRA8 985 aaKnown RBP30.15■■■□□ 2.42
ATPAF1-202ENST00000371937 ESYT2A0FGR8 921 aa30.15■■■□□ 2.42
ATPAF1-202ENST00000371937 L3MBTL3Q96JM7 780 aaPredicted RBP30.15■■■□□ 2.42
ATPAF1-202ENST00000371937 A0A1W2PQ27 194 aa30.14■■■□□ 2.42
ATPAF1-202ENST00000371937 A0A1W2PQ64 194 aa30.14■■■□□ 2.42
ATPAF1-202ENST00000371937 A0A1W2PQD8 194 aa30.14■■■□□ 2.42
ATPAF1-202ENST00000371937 USP17L10C9JJH3 530 aa30.14■■■□□ 2.42
ATPAF1-202ENST00000371937 TRAPPC10P48553 1259 aa30.14■■■□□ 2.42
ATPAF1-202ENST00000371937 PPP1R18Q6NYC8 613 aa30.14■■■□□ 2.42
ATPAF1-202ENST00000371937 SMCO2A6NFE2 343 aa30.13■■■□□ 2.41
ATPAF1-202ENST00000371937 ZNF445P59923 1031 aa30.13■■■□□ 2.41
ATPAF1-202ENST00000371937 SUPT20HL1Q3ZLR7 823 aa30.13■■■□□ 2.41
ATPAF1-202ENST00000371937 VCPKMTQ9H867 229 aa30.13■■■□□ 2.41
ATPAF1-202ENST00000371937 TRIM75PA6NK02 468 aa30.12■■■□□ 2.41
ATPAF1-202ENST00000371937 M0R2N6 131 aa30.12■■■□□ 2.41
ATPAF1-202ENST00000371937 LETM1O95202 739 aaPredicted RBP30.12■■■□□ 2.41
ATPAF1-202ENST00000371937 LIG1P18858 919 aa30.12■■■□□ 2.41
ATPAF1-202ENST00000371937 EARS2Q5JPH6 523 aaKnown RBP30.12■■■□□ 2.41
ATPAF1-202ENST00000371937 BTNL9Q6UXG8 535 aa30.12■■■□□ 2.41
ATPAF1-202ENST00000371937 PIK3AP1Q6ZUJ8 805 aa30.12■■■□□ 2.41
ATPAF1-202ENST00000371937 CCAR1Q8IX12 1150 aaKnown RBP30.12■■■□□ 2.41
ATPAF1-202ENST00000371937 NUP88Q99567 741 aaPredicted RBP30.12■■■□□ 2.41
ATPAF1-202ENST00000371937 ZNF112Q9UJU3 913 aa30.12■■■□□ 2.41
ATPAF1-202ENST00000371937 TMEM232C9JQI7 657 aa30.12■■■□□ 2.41
ATPAF1-202ENST00000371937 IKQ13123 557 aaPredicted RBP30.12■■■□□ 2.41
ATPAF1-202ENST00000371937 SPICE1Q8N0Z3 855 aa30.12■■■□□ 2.41
ATPAF1-202ENST00000371937 PCDHB6Q9Y5E3 794 aa30.12■■■□□ 2.41
ATPAF1-202ENST00000371937 BMP15O95972 392 aa30.11■■■□□ 2.41
ATPAF1-202ENST00000371937 DCPSQ96C86 337 aaKnown RBP30.11■■■□□ 2.41
ATPAF1-202ENST00000371937 ATAD5Q96QE3 1844 aa30.11■■■□□ 2.41
ATPAF1-202ENST00000371937 CCDC194A0A1B0GVG4 234 aa30.1■■■□□ 2.41
ATPAF1-202ENST00000371937 FAM205CA6NFA0 338 aa30.1■■■□□ 2.41
ATPAF1-202ENST00000371937 SYDE2Q5VT97 1194 aa30.1■■■□□ 2.41
ATPAF1-202ENST00000371937 CCDC73Q6ZRK6 1079 aa30.1■■■□□ 2.41
ATPAF1-202ENST00000371937 DDX19AQ9NUU7 478 aaKnown RBP30.1■■■□□ 2.41
ATPAF1-202ENST00000371937 FRMD4AQ9P2Q2 1039 aaPredicted RBP30.1■■■□□ 2.41
ATPAF1-202ENST00000371937 PCDHA6Q9UN73 950 aa30.1■■■□□ 2.41
ATPAF1-202ENST00000371937 PCDHA8Q9Y5H6 950 aa30.1■■■□□ 2.41
ATPAF1-202ENST00000371937 MORC2Q9Y6X9 1032 aaPredicted RBP30.1■■■□□ 2.41
ATPAF1-202ENST00000371937 ATP2B1P20020 1258 aa30.1■■■□□ 2.41
ATPAF1-202ENST00000371937 MARCKSP29966 332 aaPredicted RBP30.1■■■□□ 2.41
ATPAF1-202ENST00000371937 PRAMEF18Q5VWM3 479 aa30.1■■■□□ 2.41
ATPAF1-202ENST00000371937 COA7Q96BR5 231 aa30.1■■■□□ 2.41
ATPAF1-202ENST00000371937 DACT1Q9NYF0 836 aa30.1■■■□□ 2.41
ATPAF1-202ENST00000371937 STAT2P52630 851 aa30.09■■■□□ 2.41
ATPAF1-202ENST00000371937 MRPS27Q92552 414 aaKnown RBP30.09■■■□□ 2.41
ATPAF1-202ENST00000371937 FEZ1Q99689 392 aa30.09■■■□□ 2.41
ATPAF1-202ENST00000371937 CDC37Q16543 378 aaPredicted RBP30.08■■■□□ 2.41
ATPAF1-202ENST00000371937 QRICH1Q2TAL8 776 aa30.08■■■□□ 2.41
ATPAF1-202ENST00000371937 TTC38Q5R3I4 469 aa30.08■■■□□ 2.41
ATPAF1-202ENST00000371937 AXDND1Q5T1B0 1012 aaPredicted RBP30.08■■■□□ 2.41
ATPAF1-202ENST00000371937 USP50Q70EL3 339 aaPredicted RBP30.08■■■□□ 2.41
ATPAF1-202ENST00000371937 GLTPD2A6NH11 291 aa30.08■■■□□ 2.41
ATPAF1-202ENST00000371937 ADAMTS3O15072 1205 aa30.08■■■□□ 2.41
ATPAF1-202ENST00000371937 INPP5BP32019 993 aa30.08■■■□□ 2.41
ATPAF1-202ENST00000371937 NOM1Q5C9Z4 860 aaKnown RBP30.08■■■□□ 2.41
ATPAF1-202ENST00000371937 KRT25Q7Z3Z0 450 aa30.08■■■□□ 2.41
ATPAF1-202ENST00000371937 SULF1Q8IWU6 871 aa30.08■■■□□ 2.41
ATPAF1-202ENST00000371937 SCYL3Q8IZE3 742 aa30.08■■■□□ 2.41
ATPAF1-202ENST00000371937 FSIP1Q8NA03 581 aa30.08■■■□□ 2.41
ATPAF1-202ENST00000371937 CHURC1Q8WUH1 139 aa30.08■■■□□ 2.41
ATPAF1-202ENST00000371937 WRNIP1Q96S55 665 aa30.08■■■□□ 2.41
ATPAF1-202ENST00000371937 SYCE3A1L190 88 aa30.07■■■□□ 2.4
ATPAF1-202ENST00000371937 CUTAO60888 179 aa30.07■■■□□ 2.4
ATPAF1-202ENST00000371937 PPP1R11O60927 126 aaPredicted RBP30.07■■■□□ 2.4
ATPAF1-202ENST00000371937 CMA1P23946 247 aa30.07■■■□□ 2.4
ATPAF1-202ENST00000371937 ADCY7P51828 1080 aa30.07■■■□□ 2.4
ATPAF1-202ENST00000371937 KIAA1755Q5JYT7 1200 aa30.07■■■□□ 2.4
ATPAF1-202ENST00000371937 FAM83BQ5T0W9 1011 aa30.07■■■□□ 2.4
ATPAF1-202ENST00000371937 KRI1Q8N9T8 703 aaKnown RBP30.07■■■□□ 2.4
ATPAF1-202ENST00000371937 GOLGA6L3A6NEY3 463 aa30.06■■■□□ 2.4
ATPAF1-202ENST00000371937 PLA2G6O60733 806 aa30.06■■■□□ 2.4
ATPAF1-202ENST00000371937 NR1I2O75469 434 aa30.06■■■□□ 2.4
ATPAF1-202ENST00000371937 FAM160A1Q05DH4 1040 aa30.06■■■□□ 2.4
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms