RNA–Protein interactions for RNA: ENST00000368215.7

PTPRK-206, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPRK, Length 4,651 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-206ENST00000368215 MROH7-TTC4A0A0A0MT08 1334 aa9.46□□□□□ -0.89
PTPRK-206ENST00000368215 STK36Q9NRP7 1315 aa9.46□□□□□ -0.89
PTPRK-206ENST00000368215 SOWAHDA6NJG2 315 aa9.46□□□□□ -0.9
PTPRK-206ENST00000368215 H0YHG0 523 aa9.46□□□□□ -0.9
PTPRK-206ENST00000368215 PIK3C2AO00443 1686 aa9.46□□□□□ -0.9
PTPRK-206ENST00000368215 SSR1P43307 286 aaKnown RBP9.46□□□□□ -0.9
PTPRK-206ENST00000368215 RNASE9P60153 205 aaKnown RBP9.46□□□□□ -0.9
PTPRK-206ENST00000368215 JAKMIP2Q96AA8 810 aa9.46□□□□□ -0.9
PTPRK-206ENST00000368215 STX10O60499 249 aa9.46□□□□□ -0.9
PTPRK-206ENST00000368215 NTSR2O95665 410 aa9.46□□□□□ -0.9
PTPRK-206ENST00000368215 GRIN1Q05586 938 aa9.46□□□□□ -0.9
PTPRK-206ENST00000368215 GRAPQ13588 217 aa9.46□□□□□ -0.9
PTPRK-206ENST00000368215 ENGASEQ8NFI3 743 aa9.46□□□□□ -0.9
PTPRK-206ENST00000368215 GRAPLQ8TC17 118 aaPredicted RBP9.46□□□□□ -0.9
PTPRK-206ENST00000368215 TEKT1Q969V4 418 aa9.46□□□□□ -0.9
PTPRK-206ENST00000368215 TSPYL1Q9H0U9 437 aa9.46□□□□□ -0.9
PTPRK-206ENST00000368215 EHMT1Q9H9B1 1298 aa9.46□□□□□ -0.9
PTPRK-206ENST00000368215 MYO6Q9UM54 1294 aa9.46□□□□□ -0.9
PTPRK-206ENST00000368215 GDAQ9Y2T3 454 aa9.46□□□□□ -0.9
PTPRK-206ENST00000368215 PNPLA7Q6ZV29 1317 aa9.45□□□□□ -0.9
PTPRK-206ENST00000368215 FAM13AO94988 1023 aa9.45□□□□□ -0.9
PTPRK-206ENST00000368215 CERS3Q8IU89 383 aa9.45□□□□□ -0.9
PTPRK-206ENST00000368215 OR8K1Q8NGG5 319 aa9.45□□□□□ -0.9
PTPRK-206ENST00000368215 TBCKQ8TEA7 893 aa9.45□□□□□ -0.9
PTPRK-206ENST00000368215 ERLIN2O94905 339 aa9.45□□□□□ -0.9
PTPRK-206ENST00000368215 TRAPPC10P48553 1259 aa9.45□□□□□ -0.9
PTPRK-206ENST00000368215 CUL4BQ13620 913 aa9.45□□□□□ -0.9
PTPRK-206ENST00000368215 TYW1BQ6NUM6 668 aa9.45□□□□□ -0.9
PTPRK-206ENST00000368215 KCTD1Q719H9 257 aa9.45□□□□□ -0.9
PTPRK-206ENST00000368215 KLRK1P26718 216 aa9.45□□□□□ -0.9
PTPRK-206ENST00000368215 CDK8P49336 464 aa9.45□□□□□ -0.9
PTPRK-206ENST00000368215 GDAP1L1Q96MZ0 367 aa9.45□□□□□ -0.9
PTPRK-206ENST00000368215 H7C1D1 291 aa9.44□□□□□ -0.9
PTPRK-206ENST00000368215 APBA3O96018 575 aa9.44□□□□□ -0.9
PTPRK-206ENST00000368215 CFBP00751 764 aa9.44□□□□□ -0.9
PTPRK-206ENST00000368215 MAPK8IP2Q13387 824 aaPredicted RBP9.44□□□□□ -0.9
PTPRK-206ENST00000368215 C2CD5Q86YS7 1000 aa9.44□□□□□ -0.9
PTPRK-206ENST00000368215 STAG2Q8N3U4 1231 aa9.44□□□□□ -0.9
PTPRK-206ENST00000368215 LINC00116Q8NCU8 138 aa9.44□□□□□ -0.9
PTPRK-206ENST00000368215 NSUN4Q96CB9 384 aaKnown RBP9.44□□□□□ -0.9
PTPRK-206ENST00000368215 HINFPQ9BQA5 517 aa9.44□□□□□ -0.9
PTPRK-206ENST00000368215 PSTPIP2Q9H939 334 aa9.44□□□□□ -0.9
PTPRK-206ENST00000368215 DBNDD1Q9H9R9 158 aa9.44□□□□□ -0.9
PTPRK-206ENST00000368215 VPS18Q9P253 973 aa9.44□□□□□ -0.9
PTPRK-206ENST00000368215 BCCIPQ9P287 314 aaKnown RBP eCLIP9.44□□□□□ -0.9
PTPRK-206ENST00000368215 HDAC9Q9UKV0 1011 aa9.44□□□□□ -0.9
PTPRK-206ENST00000368215 PP2D1A8MPX8 630 aa9.44□□□□□ -0.9
PTPRK-206ENST00000368215 B4DLN1 442 aa9.44□□□□□ -0.9
PTPRK-206ENST00000368215 ARMCX5Q6P1M9 558 aa9.44□□□□□ -0.9
PTPRK-206ENST00000368215 INTS5Q6P9B9 1019 aaKnown RBP9.44□□□□□ -0.9
PTPRK-206ENST00000368215 RRAGAQ7L523 313 aa9.44□□□□□ -0.9
PTPRK-206ENST00000368215 MAEAQ7L5Y9 396 aa9.44□□□□□ -0.9
PTPRK-206ENST00000368215 SRBD1Q8N5C6 995 aaKnown RBP9.44□□□□□ -0.9
PTPRK-206ENST00000368215 ACRBPQ8NEB7 543 aa9.44□□□□□ -0.9
PTPRK-206ENST00000368215 ZNF512BQ96KM6 892 aaPredicted RBP9.44□□□□□ -0.9
PTPRK-206ENST00000368215 NAA15Q9BXJ9 866 aaKnown RBP9.44□□□□□ -0.9
PTPRK-206ENST00000368215 TMEM47Q9BQJ4 181 aa9.44□□□□□ -0.9
PTPRK-206ENST00000368215 PCDHA12Q9UN75 941 aa9.44□□□□□ -0.9
PTPRK-206ENST00000368215 SP4Q02446 784 aa9.44□□□□□ -0.9
PTPRK-206ENST00000368215 LRRC41Q15345 812 aa9.44□□□□□ -0.9
PTPRK-206ENST00000368215 FBXO2Q9UK22 296 aaPredicted RBP9.44□□□□□ -0.9
PTPRK-206ENST00000368215 DDX39AO00148 427 aaKnown RBP9.43□□□□□ -0.9
PTPRK-206ENST00000368215 TEX33O43247 280 aa9.43□□□□□ -0.9
PTPRK-206ENST00000368215 PRR16Q569H4 304 aa9.43□□□□□ -0.9
PTPRK-206ENST00000368215 STXBP4Q6ZWJ1 553 aa9.43□□□□□ -0.9
PTPRK-206ENST00000368215 PLEKHA4Q9H4M7 779 aa9.43□□□□□ -0.9
PTPRK-206ENST00000368215 GOPCQ9HD26 462 aa9.43□□□□□ -0.9
PTPRK-206ENST00000368215 RGPD8O14715 1765 aaPredicted RBP9.43□□□□□ -0.9
PTPRK-206ENST00000368215 SPATA31A1Q5TZJ5 1347 aa9.43□□□□□ -0.9
PTPRK-206ENST00000368215 MAGEA1P43355 309 aa9.43□□□□□ -0.9
PTPRK-206ENST00000368215 CACNB3P54284 484 aa9.43□□□□□ -0.9
PTPRK-206ENST00000368215 CACNB1Q02641 598 aaPredicted RBP9.43□□□□□ -0.9
PTPRK-206ENST00000368215 NCBP1Q09161 790 aaKnown RBP9.43□□□□□ -0.9
PTPRK-206ENST00000368215 CETN1Q12798 172 aa9.43□□□□□ -0.9
PTPRK-206ENST00000368215 PFKFB3Q16875 520 aaPredicted RBP9.43□□□□□ -0.9
PTPRK-206ENST00000368215 DGKHQ86XP1 1220 aa9.43□□□□□ -0.9
PTPRK-206ENST00000368215 SMAP1Q8IYB5 467 aaPredicted RBP9.43□□□□□ -0.9
PTPRK-206ENST00000368215 SLC4A9Q96Q91 983 aa9.43□□□□□ -0.9
PTPRK-206ENST00000368215 UTP18Q9Y5J1 556 aaKnown RBP eCLIP9.43□□□□□ -0.9
PTPRK-206ENST00000368215 KNDC1Q76NI1 1749 aa9.43□□□□□ -0.9
PTPRK-206ENST00000368215 TRIM49BA6NDI0 452 aa9.43□□□□□ -0.9
PTPRK-206ENST00000368215 H0YIN7 160 aa9.43□□□□□ -0.9
PTPRK-206ENST00000368215 PLCG1P19174 1290 aa9.43□□□□□ -0.9
PTPRK-206ENST00000368215 PPP1R2P41236 205 aa9.43□□□□□ -0.9
PTPRK-206ENST00000368215 UBE2SQ16763 222 aa9.43□□□□□ -0.9
PTPRK-206ENST00000368215 CCDC174Q6PII3 467 aa9.43□□□□□ -0.9
PTPRK-206ENST00000368215 HS2ST1Q7LGA3 356 aa9.43□□□□□ -0.9
PTPRK-206ENST00000368215 TAX1BP1Q86VP1 789 aa9.43□□□□□ -0.9
PTPRK-206ENST00000368215 SPICE1Q8N0Z3 855 aa9.43□□□□□ -0.9
PTPRK-206ENST00000368215 SLC35F6Q8N357 371 aa9.43□□□□□ -0.9
PTPRK-206ENST00000368215 TUBGCP2Q9BSJ2 902 aa9.43□□□□□ -0.9
PTPRK-206ENST00000368215 OSBPL5Q9H0X9 879 aaPredicted RBP9.43□□□□□ -0.9
PTPRK-206ENST00000368215 EPN1Q9Y6I3 576 aaPredicted RBP9.43□□□□□ -0.9
PTPRK-206ENST00000368215 BAZ2BQ9UIF8 2168 aaKnown RBP9.43□□□□□ -0.9
PTPRK-206ENST00000368215 AKAP12Q02952 1782 aa9.43□□□□□ -0.9
PTPRK-206ENST00000368215 WTIPA6NIX2 430 aaPredicted RBP9.43□□□□□ -0.9
PTPRK-206ENST00000368215 ENC1O14682 589 aa9.43□□□□□ -0.9
PTPRK-206ENST00000368215 PPEF1O14829 653 aaPredicted RBP9.43□□□□□ -0.9
PTPRK-206ENST00000368215 CETN3O15182 167 aa9.43□□□□□ -0.9
PTPRK-206ENST00000368215 SEC31AO94979 1220 aaKnown RBP9.43□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 56.2 ms