RNA–Protein interactions for RNA: ENST00000340477.9

SYNE4-202, Transcript of spectrin repeat containing nuclear envelope family member 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SYNE4, Length 1,004 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE4-202ENST00000340477 E7EWF7 191 aa22.52■■□□□ 1.2
SYNE4-202ENST00000340477 CYP2B6P20813 491 aa22.52■■□□□ 1.2
SYNE4-202ENST00000340477 STAT3P40763 770 aa22.52■■□□□ 1.2
SYNE4-202ENST00000340477 SOX10P56693 466 aa22.52■■□□□ 1.2
SYNE4-202ENST00000340477 APBA2Q99767 749 aa22.52■■□□□ 1.2
SYNE4-202ENST00000340477 SLC5A4Q9NY91 659 aa22.52■■□□□ 1.2
SYNE4-202ENST00000340477 GJD2Q9UKL4 321 aa22.52■■□□□ 1.2
SYNE4-202ENST00000340477 RBBP6Q7Z6E9 1792 aaKnown RBP22.52■■□□□ 1.2
SYNE4-202ENST00000340477 STRNO43815 780 aa22.51■■□□□ 1.19
SYNE4-202ENST00000340477 PLA2G6O60733 806 aa22.51■■□□□ 1.19
SYNE4-202ENST00000340477 ELNP15502 786 aa22.51■■□□□ 1.19
SYNE4-202ENST00000340477 PTPREP23469 700 aa22.51■■□□□ 1.19
SYNE4-202ENST00000340477 IFIT1BQ5T764 474 aaKnown RBP22.51■■□□□ 1.19
SYNE4-202ENST00000340477 SNRNP48Q6IEG0 339 aaKnown RBP22.51■■□□□ 1.19
SYNE4-202ENST00000340477 RIOX2Q8IUF8 465 aa22.51■■□□□ 1.19
SYNE4-202ENST00000340477 HTTP42858 3142 aa22.51■■□□□ 1.19
SYNE4-202ENST00000340477 MYCP01106 439 aaPredicted RBP22.5■■□□□ 1.19
SYNE4-202ENST00000340477 HMGCRP04035 888 aa22.5■■□□□ 1.19
SYNE4-202ENST00000340477 XRCC5P13010 732 aaKnown RBP22.5■■□□□ 1.19
SYNE4-202ENST00000340477 ZKSCAN1P17029 563 aaPredicted RBP22.5■■□□□ 1.19
SYNE4-202ENST00000340477 OAZ1P54368 228 aa22.5■■□□□ 1.19
SYNE4-202ENST00000340477 MAP2K5Q13163 448 aa22.5■■□□□ 1.19
SYNE4-202ENST00000340477 MORN1Q5T089 497 aa22.5■■□□□ 1.19
SYNE4-202ENST00000340477 ENAHQ8N8S7 591 aaPredicted RBP22.5■■□□□ 1.19
SYNE4-202ENST00000340477 PNMA1Q8ND90 353 aa22.5■■□□□ 1.19
SYNE4-202ENST00000340477 SLC38A10Q9HBR0 1119 aa22.5■■□□□ 1.19
SYNE4-202ENST00000340477 ZNF214Q9UL59 606 aaPredicted RBP22.5■■□□□ 1.19
SYNE4-202ENST00000340477 INHAP05111 366 aa22.49■■□□□ 1.19
SYNE4-202ENST00000340477 PDHBP11177 359 aa22.49■■□□□ 1.19
SYNE4-202ENST00000340477 FCER1AP12319 257 aa22.49■■□□□ 1.19
SYNE4-202ENST00000340477 GRB14Q14449 540 aa22.49■■□□□ 1.19
SYNE4-202ENST00000340477 DPP9Q86TI2 863 aa22.49■■□□□ 1.19
SYNE4-202ENST00000340477 CPXCR1Q8N123 301 aa22.49■■□□□ 1.19
SYNE4-202ENST00000340477 REPS2Q8NFH8 660 aa22.49■■□□□ 1.19
SYNE4-202ENST00000340477 ANKS1AQ92625 1134 aa22.49■■□□□ 1.19
SYNE4-202ENST00000340477 IFIT3O14879 490 aaKnown RBP22.48■■□□□ 1.19
SYNE4-202ENST00000340477 SLC27A2O14975 620 aa22.48■■□□□ 1.19
SYNE4-202ENST00000340477 ATP2A1O14983 1001 aa22.48■■□□□ 1.19
SYNE4-202ENST00000340477 REC8O95072 547 aa22.48■■□□□ 1.19
SYNE4-202ENST00000340477 SLC4A3P48751 1232 aa22.48■■□□□ 1.19
SYNE4-202ENST00000340477 KCTD2Q14681 263 aa22.48■■□□□ 1.19
SYNE4-202ENST00000340477 GPATCH4Q5T3I0 446 aaKnown RBP22.48■■□□□ 1.19
SYNE4-202ENST00000340477 CREB3L3Q68CJ9 461 aa22.48■■□□□ 1.19
SYNE4-202ENST00000340477 ABRAQ8N0Z2 381 aa22.48■■□□□ 1.19
SYNE4-202ENST00000340477 NKX2-3Q8TAU0 364 aa22.48■■□□□ 1.19
SYNE4-202ENST00000340477 FRMPD2Q68DX3 1309 aaPredicted RBP22.48■■□□□ 1.19
SYNE4-202ENST00000340477 CYB5R4Q7L1T6 521 aa22.47■■□□□ 1.19
SYNE4-202ENST00000340477 MMP19Q99542 508 aa22.47■■□□□ 1.19
SYNE4-202ENST00000340477 RAVER2Q9HCJ3 691 aaKnown RBP22.47■■□□□ 1.19
SYNE4-202ENST00000340477 GPCPD1Q9NPB8 672 aa22.47■■□□□ 1.19
SYNE4-202ENST00000340477 FBXO40Q9UH90 709 aa22.47■■□□□ 1.19
SYNE4-202ENST00000340477 PRR12Q9ULL5 1215 aa22.47■■□□□ 1.19
SYNE4-202ENST00000340477 ADORA2AP29274 412 aa22.46■■□□□ 1.19
SYNE4-202ENST00000340477 ZNF543Q08ER8 600 aa22.46■■□□□ 1.19
SYNE4-202ENST00000340477 WTAPQ15007 396 aa22.46■■□□□ 1.19
SYNE4-202ENST00000340477 SYDE2Q5VT97 1194 aa22.46■■□□□ 1.19
SYNE4-202ENST00000340477 RASGRP2Q7LDG7 609 aa22.46■■□□□ 1.19
SYNE4-202ENST00000340477 USP6NLQ92738 828 aa22.46■■□□□ 1.19
SYNE4-202ENST00000340477 SNHG28P0DPA3 235 aa22.45■■□□□ 1.18
SYNE4-202ENST00000340477 CCL5P13501 91 aa22.45■■□□□ 1.18
SYNE4-202ENST00000340477 NECTIN1Q15223 517 aa22.45■■□□□ 1.18
SYNE4-202ENST00000340477 ASPRV1Q53RT3 343 aa22.45■■□□□ 1.18
SYNE4-202ENST00000340477 TMEM67Q5HYA8 995 aa22.45■■□□□ 1.18
SYNE4-202ENST00000340477 MFSD14CQ5VZR4 134 aa22.45■■□□□ 1.18
SYNE4-202ENST00000340477 BTNL9Q6UXG8 535 aa22.45■■□□□ 1.18
SYNE4-202ENST00000340477 STOX1Q6ZVD7 989 aa22.45■■□□□ 1.18
SYNE4-202ENST00000340477 TRIB2Q92519 343 aa22.45■■□□□ 1.18
SYNE4-202ENST00000340477 RNF208Q9H0X6 261 aa22.45■■□□□ 1.18
SYNE4-202ENST00000340477 PNMA2Q9UL42 364 aa22.45■■□□□ 1.18
SYNE4-202ENST00000340477 TAF6LQ9Y6J9 622 aa22.45■■□□□ 1.18
SYNE4-202ENST00000340477 HOXC6P09630 235 aa22.44■■□□□ 1.18
SYNE4-202ENST00000340477 PARP1P09874 1014 aaKnown RBP22.44■■□□□ 1.18
SYNE4-202ENST00000340477 MCM5P33992 734 aa22.44■■□□□ 1.18
SYNE4-202ENST00000340477 KRT32Q14532 448 aa22.44■■□□□ 1.18
SYNE4-202ENST00000340477 TKFCQ3LXA3 575 aa22.44■■□□□ 1.18
SYNE4-202ENST00000340477 CCDC174Q6PII3 467 aa22.44■■□□□ 1.18
SYNE4-202ENST00000340477 MB21D2Q8IYB1 491 aaPredicted RBP22.44■■□□□ 1.18
SYNE4-202ENST00000340477 CHST13Q8NET6 341 aa22.44■■□□□ 1.18
SYNE4-202ENST00000340477 ZNFX1Q9P2E3 1918 aaKnown RBP22.44■■□□□ 1.18
SYNE4-202ENST00000340477 KIAA0100Q14667 2235 aaKnown RBP22.43■■□□□ 1.18
SYNE4-202ENST00000340477 SLC16A2P36021 539 aa22.43■■□□□ 1.18
SYNE4-202ENST00000340477 MTFR1Q15390 333 aa22.43■■□□□ 1.18
SYNE4-202ENST00000340477 SEC23AQ15436 765 aa22.43■■□□□ 1.18
SYNE4-202ENST00000340477 TTBK2Q6IQ55 1244 aa22.43■■□□□ 1.18
SYNE4-202ENST00000340477 MTA3Q9BTC8 594 aa22.43■■□□□ 1.18
SYNE4-202ENST00000340477 PLXNA1Q9UIW2 1896 aa22.43■■□□□ 1.18
SYNE4-202ENST00000340477 CHST3Q7LGC8 479 aa22.42■■□□□ 1.18
SYNE4-202ENST00000340477 CATIPQ7Z7H3 387 aa22.42■■□□□ 1.18
SYNE4-202ENST00000340477 DDX11Q96FC9 970 aa22.42■■□□□ 1.18
SYNE4-202ENST00000340477 UNC93B1Q9H1C4 597 aa22.42■■□□□ 1.18
SYNE4-202ENST00000340477 RANBP17Q9H2T7 1088 aaKnown RBP22.42■■□□□ 1.18
SYNE4-202ENST00000340477 ACAD9Q9H845 621 aa22.42■■□□□ 1.18
SYNE4-202ENST00000340477 HMX1Q9NP08 348 aaPredicted RBP22.42■■□□□ 1.18
SYNE4-202ENST00000340477 HOMER2Q9NSB8 354 aa22.42■■□□□ 1.18
SYNE4-202ENST00000340477 CCPG1Q9ULG6 757 aa22.42■■□□□ 1.18
SYNE4-202ENST00000340477 CENPFP49454 3210 aa22.41■■□□□ 1.18
SYNE4-202ENST00000340477 RPTORQ8N122 1335 aa22.41■■□□□ 1.18
SYNE4-202ENST00000340477 PRC1O43663 620 aa22.41■■□□□ 1.18
SYNE4-202ENST00000340477 DHX16O60231 1041 aaKnown RBP22.41■■□□□ 1.18
SYNE4-202ENST00000340477 GOLGA8HP0CJ92 632 aa22.41■■□□□ 1.18
Retrieved 100 of 20,778 RNA–protein pairs in 67.8 ms