RNA–Protein interactions for RNA: ENST00000338602.6

SLC28A1-202, Transcript of solute carrier family 28 member 1, humanhuman

TSL 1 (best) BASIC

Gene SLC28A1, Length 1,360 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC28A1-202ENST00000338602 TMEM132BQ14DG7 1078 aa13.3□□□□□ -0.28
SLC28A1-202ENST00000338602 SART3Q15020 963 aaKnown RBP13.3□□□□□ -0.28
SLC28A1-202ENST00000338602 RNF20Q5VTR2 975 aa13.3□□□□□ -0.28
SLC28A1-202ENST00000338602 POTEEQ6S8J3 1075 aa13.3□□□□□ -0.28
SLC28A1-202ENST00000338602 NCOA7Q8NI08 942 aa13.3□□□□□ -0.28
SLC28A1-202ENST00000338602 ZKSCAN3Q9BRR0 538 aa13.3□□□□□ -0.28
SLC28A1-202ENST00000338602 TEX13BQ9BXU2 312 aa13.3□□□□□ -0.28
SLC28A1-202ENST00000338602 KAT14Q9H8E8 782 aa13.3□□□□□ -0.28
SLC28A1-202ENST00000338602 ZSWIM8A7E2V4 1837 aa13.29□□□□□ -0.28
SLC28A1-202ENST00000338602 FCER1AP12319 257 aa13.29□□□□□ -0.28
SLC28A1-202ENST00000338602 ELNP15502 786 aa13.29□□□□□ -0.28
SLC28A1-202ENST00000338602 OAZ1P54368 228 aa13.29□□□□□ -0.28
SLC28A1-202ENST00000338602 MORN1Q5T089 497 aa13.29□□□□□ -0.28
SLC28A1-202ENST00000338602 KCTD1Q719H9 257 aa13.29□□□□□ -0.28
SLC28A1-202ENST00000338602 DPP9Q86TI2 863 aa13.29□□□□□ -0.28
SLC28A1-202ENST00000338602 RIOX2Q8IUF8 465 aa13.29□□□□□ -0.28
SLC28A1-202ENST00000338602 ABRAQ8N0Z2 381 aa13.29□□□□□ -0.28
SLC28A1-202ENST00000338602 LSG1Q9H089 658 aaKnown RBP13.29□□□□□ -0.28
SLC28A1-202ENST00000338602 LAMA4Q16363 1823 aa13.29□□□□□ -0.28
SLC28A1-202ENST00000338602 E7EWF7 191 aa13.28□□□□□ -0.28
SLC28A1-202ENST00000338602 ATP2A1O14983 1001 aa13.28□□□□□ -0.28
SLC28A1-202ENST00000338602 MYCP01106 439 aaPredicted RBP13.28□□□□□ -0.28
SLC28A1-202ENST00000338602 HMGCRP04035 888 aa13.28□□□□□ -0.28
SLC28A1-202ENST00000338602 INHAP05111 366 aa13.28□□□□□ -0.28
SLC28A1-202ENST00000338602 ZKSCAN1P17029 563 aaPredicted RBP13.28□□□□□ -0.28
SLC28A1-202ENST00000338602 GRB14Q14449 540 aa13.28□□□□□ -0.28
SLC28A1-202ENST00000338602 KCTD2Q14681 263 aa13.28□□□□□ -0.28
SLC28A1-202ENST00000338602 GPATCH4Q5T3I0 446 aaKnown RBP13.28□□□□□ -0.28
SLC28A1-202ENST00000338602 IFIT1BQ5T764 474 aaKnown RBP13.28□□□□□ -0.28
SLC28A1-202ENST00000338602 SNRNP48Q6IEG0 339 aaKnown RBP13.28□□□□□ -0.28
SLC28A1-202ENST00000338602 CPXCR1Q8N123 301 aa13.28□□□□□ -0.28
SLC28A1-202ENST00000338602 NKX2-3Q8TAU0 364 aa13.28□□□□□ -0.28
SLC28A1-202ENST00000338602 ANKS1AQ92625 1134 aa13.28□□□□□ -0.28
SLC28A1-202ENST00000338602 CHMP4CQ96CF2 233 aa13.28□□□□□ -0.28
SLC28A1-202ENST00000338602 APBA2Q99767 749 aa13.28□□□□□ -0.28
SLC28A1-202ENST00000338602 SLC38A10Q9HBR0 1119 aa13.28□□□□□ -0.28
SLC28A1-202ENST00000338602 ZNF214Q9UL59 606 aaPredicted RBP13.28□□□□□ -0.28
SLC28A1-202ENST00000338602 TNKSO95271 1327 aa13.28□□□□□ -0.28
SLC28A1-202ENST00000338602 CAPN2P17655 700 aa13.27□□□□□ -0.29
SLC28A1-202ENST00000338602 SLC4A3P48751 1232 aa13.27□□□□□ -0.29
SLC28A1-202ENST00000338602 MFSD14CQ5VZR4 134 aa13.27□□□□□ -0.29
SLC28A1-202ENST00000338602 PNMA1Q8ND90 353 aa13.27□□□□□ -0.29
SLC28A1-202ENST00000338602 REPS2Q8NFH8 660 aa13.27□□□□□ -0.29
SLC28A1-202ENST00000338602 USP6NLQ92738 828 aa13.27□□□□□ -0.29
SLC28A1-202ENST00000338602 MMP19Q99542 508 aa13.27□□□□□ -0.29
SLC28A1-202ENST00000338602 RNF208Q9H0X6 261 aa13.27□□□□□ -0.29
SLC28A1-202ENST00000338602 FBXO40Q9UH90 709 aa13.27□□□□□ -0.29
SLC28A1-202ENST00000338602 PNMA2Q9UL42 364 aa13.27□□□□□ -0.29
SLC28A1-202ENST00000338602 IFIT3O14879 490 aaKnown RBP13.26□□□□□ -0.29
SLC28A1-202ENST00000338602 HOXC6P09630 235 aa13.26□□□□□ -0.29
SLC28A1-202ENST00000338602 PDHBP11177 359 aa13.26□□□□□ -0.29
SLC28A1-202ENST00000338602 CCL5P13501 91 aa13.26□□□□□ -0.29
SLC28A1-202ENST00000338602 ADORA2AP29274 412 aa13.26□□□□□ -0.29
SLC28A1-202ENST00000338602 CREB3L3Q68CJ9 461 aa13.26□□□□□ -0.29
SLC28A1-202ENST00000338602 ENAHQ8N8S7 591 aaPredicted RBP13.26□□□□□ -0.29
SLC28A1-202ENST00000338602 RAVER2Q9HCJ3 691 aaKnown RBP13.26□□□□□ -0.29
SLC28A1-202ENST00000338602 HMX1Q9NP08 348 aaPredicted RBP13.26□□□□□ -0.29
SLC28A1-202ENST00000338602 GPCPD1Q9NPB8 672 aa13.26□□□□□ -0.29
SLC28A1-202ENST00000338602 PRR12Q9ULL5 1215 aa13.26□□□□□ -0.29
SLC28A1-202ENST00000338602 RLFQ13129 1914 aa13.26□□□□□ -0.29
SLC28A1-202ENST00000338602 DOCK3Q8IZD9 2030 aa13.26□□□□□ -0.29
SLC28A1-202ENST00000338602 SLC27A2O14975 620 aa13.25□□□□□ -0.29
SLC28A1-202ENST00000338602 REC8O95072 547 aa13.25□□□□□ -0.29
SLC28A1-202ENST00000338602 MCM5P33992 734 aa13.25□□□□□ -0.29
SLC28A1-202ENST00000338602 ZNF543Q08ER8 600 aa13.25□□□□□ -0.29
SLC28A1-202ENST00000338602 WTAPQ15007 396 aa13.25□□□□□ -0.29
SLC28A1-202ENST00000338602 NECTIN1Q15223 517 aa13.25□□□□□ -0.29
SLC28A1-202ENST00000338602 TKFCQ3LXA3 575 aa13.25□□□□□ -0.29
SLC28A1-202ENST00000338602 ASPRV1Q53RT3 343 aa13.25□□□□□ -0.29
SLC28A1-202ENST00000338602 SYDE2Q5VT97 1194 aa13.25□□□□□ -0.29
SLC28A1-202ENST00000338602 BTNL9Q6UXG8 535 aa13.25□□□□□ -0.29
SLC28A1-202ENST00000338602 CHST13Q8NET6 341 aa13.25□□□□□ -0.29
SLC28A1-202ENST00000338602 DDX11Q96FC9 970 aa13.25□□□□□ -0.29
SLC28A1-202ENST00000338602 FRMPD2Q68DX3 1309 aaPredicted RBP13.25□□□□□ -0.29
SLC28A1-202ENST00000338602 A0A0G2JMZ2 1700 aa13.25□□□□□ -0.29
SLC28A1-202ENST00000338602 GJB1P08034 283 aa13.24□□□□□ -0.29
SLC28A1-202ENST00000338602 PARP1P09874 1014 aaKnown RBP13.24□□□□□ -0.29
SLC28A1-202ENST00000338602 SNHG28P0DPA3 235 aa13.24□□□□□ -0.29
SLC28A1-202ENST00000338602 KRT32Q14532 448 aa13.24□□□□□ -0.29
SLC28A1-202ENST00000338602 MTFR1Q15390 333 aa13.24□□□□□ -0.29
SLC28A1-202ENST00000338602 TMEM67Q5HYA8 995 aa13.24□□□□□ -0.29
SLC28A1-202ENST00000338602 CYB5R4Q7L1T6 521 aa13.24□□□□□ -0.29
SLC28A1-202ENST00000338602 CUL9Q8IWT3 2517 aa13.24□□□□□ -0.29
SLC28A1-202ENST00000338602 RPTORQ8N122 1335 aa13.24□□□□□ -0.29
SLC28A1-202ENST00000338602 TMTC2Q8N394 836 aa13.24□□□□□ -0.29
SLC28A1-202ENST00000338602 TRIB2Q92519 343 aa13.24□□□□□ -0.29
SLC28A1-202ENST00000338602 MTA3Q9BTC8 594 aa13.24□□□□□ -0.29
SLC28A1-202ENST00000338602 PARP14Q460N5 1801 aa13.24□□□□□ -0.29
SLC28A1-202ENST00000338602 SLC16A2P36021 539 aa13.23□□□□□ -0.29
SLC28A1-202ENST00000338602 SEC23AQ15436 765 aa13.23□□□□□ -0.29
SLC28A1-202ENST00000338602 OLFML2BQ68BL8 750 aa13.23□□□□□ -0.29
SLC28A1-202ENST00000338602 TTBK2Q6IQ55 1244 aa13.23□□□□□ -0.29
SLC28A1-202ENST00000338602 CCDC174Q6PII3 467 aa13.23□□□□□ -0.29
SLC28A1-202ENST00000338602 CATIPQ7Z7H3 387 aa13.23□□□□□ -0.29
SLC28A1-202ENST00000338602 ANKRD35Q8N283 1001 aa13.23□□□□□ -0.29
SLC28A1-202ENST00000338602 SLC17A8Q8NDX2 589 aa13.23□□□□□ -0.29
SLC28A1-202ENST00000338602 UNC93B1Q9H1C4 597 aa13.23□□□□□ -0.29
SLC28A1-202ENST00000338602 ACAD9Q9H845 621 aa13.23□□□□□ -0.29
SLC28A1-202ENST00000338602 POTEFA5A3E0 1075 aa13.22□□□□□ -0.29
SLC28A1-202ENST00000338602 DHX16O60231 1041 aaKnown RBP13.22□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 93 ms