RNA–Protein interactions for RNA: ENST00000329563.8

TSPO-201, Transcript of translocator protein, humanhuman

APPRIS P1 TSL 3 BASIC

Gene TSPO, Length 955 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPO-201ENST00000329563 RILPL2Q969X0 211 aa17.44■□□□□ 0.38
TSPO-201ENST00000329563 SLF1Q9BQI6 1058 aa17.44■□□□□ 0.38
TSPO-201ENST00000329563 UBE2OQ9C0C9 1292 aaKnown RBP17.44■□□□□ 0.38
TSPO-201ENST00000329563 IL17RBQ9NRM6 502 aa17.44■□□□□ 0.38
TSPO-201ENST00000329563 HELLSQ9NRZ9 838 aa17.44■□□□□ 0.38
TSPO-201ENST00000329563 RIPK3Q9Y572 518 aa17.44■□□□□ 0.38
TSPO-201ENST00000329563 DNAH12Q6ZR08 3092 aa17.44■□□□□ 0.38
TSPO-201ENST00000329563 HIP1O00291 1037 aa17.43■□□□□ 0.38
TSPO-201ENST00000329563 DNM1LO00429 736 aa17.43■□□□□ 0.38
TSPO-201ENST00000329563 NMT2O60551 498 aa17.43■□□□□ 0.38
TSPO-201ENST00000329563 EIF5BO60841 1220 aaKnown RBP17.43■□□□□ 0.38
TSPO-201ENST00000329563 PGK2P07205 417 aa17.43■□□□□ 0.38
TSPO-201ENST00000329563 SYN1P17600 705 aa17.43■□□□□ 0.38
TSPO-201ENST00000329563 STAT3P40763 770 aa17.43■□□□□ 0.38
TSPO-201ENST00000329563 MAGEA10P43363 369 aaPredicted RBP17.43■□□□□ 0.38
TSPO-201ENST00000329563 PDE4BQ07343 736 aa17.43■□□□□ 0.38
TSPO-201ENST00000329563 NMIQ13287 307 aaPredicted RBP17.43■□□□□ 0.38
TSPO-201ENST00000329563 PRAMEF19Q5SWL8 479 aa17.43■□□□□ 0.38
TSPO-201ENST00000329563 CASC1Q6TDU7 716 aa17.43■□□□□ 0.38
TSPO-201ENST00000329563 RASGRP2Q7LDG7 609 aa17.43■□□□□ 0.38
TSPO-201ENST00000329563 TDHQ8IZJ6 230 aa17.43■□□□□ 0.38
TSPO-201ENST00000329563 MAML3Q96JK9 1138 aa17.43■□□□□ 0.38
TSPO-201ENST00000329563 ZNF287Q9HBT7 754 aa17.43■□□□□ 0.38
TSPO-201ENST00000329563 PLXNA1Q9UIW2 1896 aa17.43■□□□□ 0.38
TSPO-201ENST00000329563 SLC25A27O95847 323 aa17.42■□□□□ 0.38
TSPO-201ENST00000329563 TTLL1O95922 423 aa17.42■□□□□ 0.38
TSPO-201ENST00000329563 TSPY3P0CV98 308 aa17.42■□□□□ 0.38
TSPO-201ENST00000329563 TSPY8P0CW00 308 aa17.42■□□□□ 0.38
TSPO-201ENST00000329563 COPB2P35606 906 aa17.42■□□□□ 0.38
TSPO-201ENST00000329563 LRIT3Q3SXY7 679 aa17.42■□□□□ 0.38
TSPO-201ENST00000329563 ARRDC4Q8NCT1 418 aa17.42■□□□□ 0.38
TSPO-201ENST00000329563 GMCL1P1Q8NEA9 526 aa17.42■□□□□ 0.38
TSPO-201ENST00000329563 PRKAG2Q9UGJ0 569 aa17.42■□□□□ 0.38
TSPO-201ENST00000329563 ANAPC4Q9UJX5 808 aa17.42■□□□□ 0.38
TSPO-201ENST00000329563 FCER1AP12319 257 aa17.41■□□□□ 0.38
TSPO-201ENST00000329563 ZNF792Q3KQV3 632 aa17.41■□□□□ 0.38
TSPO-201ENST00000329563 MCMDC2Q4G0Z9 681 aa17.41■□□□□ 0.38
TSPO-201ENST00000329563 ANO1Q5XXA6 986 aa17.41■□□□□ 0.38
TSPO-201ENST00000329563 CHMP4CQ96CF2 233 aa17.41■□□□□ 0.38
TSPO-201ENST00000329563 LBHD1Q9BQE6 289 aaPredicted RBP17.41■□□□□ 0.38
TSPO-201ENST00000329563 SENP6Q9GZR1 1112 aaPredicted RBP17.41■□□□□ 0.38
TSPO-201ENST00000329563 KBTBD13C9JR72 458 aa17.4■□□□□ 0.38
TSPO-201ENST00000329563 CDC45O75419 566 aa17.4■□□□□ 0.38
TSPO-201ENST00000329563 FGAP02671 866 aa17.4■□□□□ 0.38
TSPO-201ENST00000329563 FGRP09769 529 aa17.4■□□□□ 0.38
TSPO-201ENST00000329563 HSPD1P10809 573 aaKnown RBP17.4■□□□□ 0.38
TSPO-201ENST00000329563 ALX1Q15699 326 aa17.4■□□□□ 0.38
TSPO-201ENST00000329563 LRRC26Q2I0M4 334 aa17.4■□□□□ 0.38
TSPO-201ENST00000329563 SLFN13Q68D06 897 aa17.4■□□□□ 0.38
TSPO-201ENST00000329563 SNRNP48Q6IEG0 339 aaKnown RBP17.4■□□□□ 0.38
TSPO-201ENST00000329563 PRPF38AQ8NAV1 312 aaKnown RBP17.4■□□□□ 0.38
TSPO-201ENST00000329563 KIFC2Q96AC6 838 aa17.4■□□□□ 0.38
TSPO-201ENST00000329563 LRCH3Q96II8 777 aa17.4■□□□□ 0.38
TSPO-201ENST00000329563 MMP19Q99542 508 aa17.4■□□□□ 0.38
TSPO-201ENST00000329563 SYNPO2Q9UMS6 1093 aa17.4■□□□□ 0.38
TSPO-201ENST00000329563 SOX1O00570 391 aaPredicted RBP17.39■□□□□ 0.37
TSPO-201ENST00000329563 ATP2A1O14983 1001 aa17.39■□□□□ 0.37
TSPO-201ENST00000329563 SEPT4O43236 478 aa17.39■□□□□ 0.37
TSPO-201ENST00000329563 SLC3A2P08195 630 aaKnown RBP17.39■□□□□ 0.37
TSPO-201ENST00000329563 NOVP48745 357 aa17.39■□□□□ 0.37
TSPO-201ENST00000329563 TEX13BQ9BXU2 312 aa17.39■□□□□ 0.37
TSPO-201ENST00000329563 SLC38A10Q9HBR0 1119 aa17.39■□□□□ 0.37
TSPO-201ENST00000329563 RAVER2Q9HCJ3 691 aaKnown RBP17.39■□□□□ 0.37
TSPO-201ENST00000329563 NRBP1Q9UHY1 535 aa17.39■□□□□ 0.37
TSPO-201ENST00000329563 CUL9Q8IWT3 2517 aa17.39■□□□□ 0.37
TSPO-201ENST00000329563 TSPY2A6NKD2 308 aa17.38■□□□□ 0.37
TSPO-201ENST00000329563 BMP3P12645 472 aa17.38■□□□□ 0.37
TSPO-201ENST00000329563 TAL1P17542 331 aaPredicted RBP17.38■□□□□ 0.37
TSPO-201ENST00000329563 KCTD2Q14681 263 aa17.38■□□□□ 0.37
TSPO-201ENST00000329563 CPXCR1Q8N123 301 aa17.38■□□□□ 0.37
TSPO-201ENST00000329563 RUFY2Q8WXA3 655 aa17.38■□□□□ 0.37
TSPO-201ENST00000329563 CCDC171Q6TFL3 1326 aa17.38■□□□□ 0.37
TSPO-201ENST00000329563 DNAJC25-GNG10A0A024R161 153 aa17.37■□□□□ 0.37
TSPO-201ENST00000329563 TMEM232C9JQI7 657 aa17.37■□□□□ 0.37
TSPO-201ENST00000329563 ORC4O43929 436 aa17.37■□□□□ 0.37
TSPO-201ENST00000329563 MCCP23508 829 aa17.37■□□□□ 0.37
TSPO-201ENST00000329563 GJC2Q5T442 439 aaPredicted RBP17.37■□□□□ 0.37
TSPO-201ENST00000329563 GMCL1Q96IK5 515 aa17.37■□□□□ 0.37
TSPO-201ENST00000329563 FGD4Q96M96 766 aa17.37■□□□□ 0.37
TSPO-201ENST00000329563 DIAPH3Q9NSV4 1193 aa17.37■□□□□ 0.37
TSPO-201ENST00000329563 FEM1BQ9UK73 627 aa17.37■□□□□ 0.37
TSPO-201ENST00000329563 STX8Q9UNK0 236 aa17.37■□□□□ 0.37
TSPO-201ENST00000329563 ZNF536O15090 1300 aa17.37■□□□□ 0.37
TSPO-201ENST00000329563 ZMYM6O95789 1325 aa17.37■□□□□ 0.37
TSPO-201ENST00000329563 SMCHD1A6NHR9 2005 aa17.37■□□□□ 0.37
TSPO-201ENST00000329563 COL6A3P12111 3177 aa17.36■□□□□ 0.37
TSPO-201ENST00000329563 RANBP6O60518 1105 aaKnown RBP17.36■□□□□ 0.37
TSPO-201ENST00000329563 SLC4A3P48751 1232 aa17.36■□□□□ 0.37
TSPO-201ENST00000329563 HAND2P61296 217 aa17.36■□□□□ 0.37
TSPO-201ENST00000329563 KCTD1Q719H9 257 aa17.36■□□□□ 0.37
TSPO-201ENST00000329563 TBC1D10CQ8IV04 446 aa17.36■□□□□ 0.37
TSPO-201ENST00000329563 TINF2Q9BSI4 451 aa17.36■□□□□ 0.37
TSPO-201ENST00000329563 IL25Q9H293 177 aa17.36■□□□□ 0.37
TSPO-201ENST00000329563 DIS3Q9Y2L1 958 aaKnown RBP17.36■□□□□ 0.37
TSPO-201ENST00000329563 LAMA4Q16363 1823 aa17.35■□□□□ 0.37
TSPO-201ENST00000329563 ZBED4O75132 1171 aa17.35■□□□□ 0.37
TSPO-201ENST00000329563 ZNF865P0CJ78 1059 aaPredicted RBP17.35■□□□□ 0.37
TSPO-201ENST00000329563 CHMLP26374 656 aa17.35■□□□□ 0.37
TSPO-201ENST00000329563 ATN1P54259 1190 aaPredicted RBP17.35■□□□□ 0.37
TSPO-201ENST00000329563 SNAP25P60880 206 aa17.35■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 63.1 ms