RNA–Protein interactions for RNA: ENST00000320755.11

COL9A1-201, Transcript of collagen type IX alpha 1 chain, humanhuman

TSL 1 (best) BASIC

Gene COL9A1, Length 3,059 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A1-201ENST00000320755 KCNJ18B7U540 433 aa19.66■□□□□ 0.74
COL9A1-201ENST00000320755 CYTH3O43739 400 aa19.66■□□□□ 0.74
COL9A1-201ENST00000320755 TFRCP02786 760 aaKnown RBP19.66■□□□□ 0.74
COL9A1-201ENST00000320755 PNMA6AP0CW24 399 aaPredicted RBP19.66■□□□□ 0.74
COL9A1-201ENST00000320755 KCNJ12Q14500 433 aa19.66■□□□□ 0.74
COL9A1-201ENST00000320755 SLC35G1Q2M3R5 365 aa19.66■□□□□ 0.74
COL9A1-201ENST00000320755 MRFAP1Q9Y605 127 aa19.66■□□□□ 0.74
COL9A1-201ENST00000320755 PBX1P40424 430 aa19.65■□□□□ 0.74
COL9A1-201ENST00000320755 COPB1P53618 953 aaKnown RBP19.65■□□□□ 0.74
COL9A1-201ENST00000320755 UBXN1Q04323 297 aa19.65■□□□□ 0.74
COL9A1-201ENST00000320755 AMOTL1Q8IY63 956 aa19.65■□□□□ 0.74
COL9A1-201ENST00000320755 C4orf32Q8N8J7 132 aa19.65■□□□□ 0.74
COL9A1-201ENST00000320755 MAD2L2Q9UI95 211 aa19.65■□□□□ 0.74
COL9A1-201ENST00000320755 KIF5CO60282 957 aa19.65■□□□□ 0.74
COL9A1-201ENST00000320755 DGKHQ86XP1 1220 aa19.65■□□□□ 0.74
COL9A1-201ENST00000320755 ANKRD20A12PQ8NF67 263 aa19.65■□□□□ 0.74
COL9A1-201ENST00000320755 ZNF658Q5TYW1 1059 aaPredicted RBP19.65■□□□□ 0.74
COL9A1-201ENST00000320755 RWDD2AQ9UIY3 292 aa19.65■□□□□ 0.74
COL9A1-201ENST00000320755 CNTNAP4Q9C0A0 1308 aa19.64■□□□□ 0.73
COL9A1-201ENST00000320755 RFC4P35249 363 aa19.64■□□□□ 0.73
COL9A1-201ENST00000320755 TCP11X2Q5H9J9 407 aa19.64■□□□□ 0.73
COL9A1-201ENST00000320755 CNGA4Q8IV77 575 aa19.64■□□□□ 0.73
COL9A1-201ENST00000320755 TMEM47Q9BQJ4 181 aa19.64■□□□□ 0.73
COL9A1-201ENST00000320755 PCDHA6Q9UN73 950 aa19.64■□□□□ 0.73
COL9A1-201ENST00000320755 PCDHA8Q9Y5H6 950 aa19.64■□□□□ 0.73
COL9A1-201ENST00000320755 LONP1P36776 959 aaKnown RBP19.64■□□□□ 0.73
COL9A1-201ENST00000320755 KIF4BQ2VIQ3 1234 aa19.64■□□□□ 0.73
COL9A1-201ENST00000320755 CT47A1Q5JQC4 288 aaPredicted RBP19.64■□□□□ 0.73
COL9A1-201ENST00000320755 SLF1Q9BQI6 1058 aa19.64■□□□□ 0.73
COL9A1-201ENST00000320755 DISC1Q9NRI5 854 aa19.64■□□□□ 0.73
COL9A1-201ENST00000320755 A0A1B0GUL6 1792 aa19.63■□□□□ 0.73
COL9A1-201ENST00000320755 BAG3O95817 575 aa19.63■□□□□ 0.73
COL9A1-201ENST00000320755 KRT9P35527 623 aa19.63■□□□□ 0.73
COL9A1-201ENST00000320755 PMS1P54277 932 aaKnown RBP19.63■□□□□ 0.73
COL9A1-201ENST00000320755 LETM2Q2VYF4 491 aa19.63■□□□□ 0.73
COL9A1-201ENST00000320755 WDR66Q8TBY9 1149 aa19.63■□□□□ 0.73
COL9A1-201ENST00000320755 POLR3GO15318 223 aaPredicted RBP19.63■□□□□ 0.73
COL9A1-201ENST00000320755 KLRF2D3W0D1 207 aa19.62■□□□□ 0.73
COL9A1-201ENST00000320755 ARL6IP4Q66PJ3 421 aaKnown RBP19.62■□□□□ 0.73
COL9A1-201ENST00000320755 USP17L2Q6R6M4 530 aa19.62■□□□□ 0.73
COL9A1-201ENST00000320755 RMND1Q9NWS8 449 aa19.62■□□□□ 0.73
COL9A1-201ENST00000320755 MKRN1Q9UHC7 482 aaKnown RBP19.62■□□□□ 0.73
COL9A1-201ENST00000320755 ERVK-24P63145 666 aa19.62■□□□□ 0.73
COL9A1-201ENST00000320755 GABPB1Q06547 395 aaPredicted RBP19.62■□□□□ 0.73
COL9A1-201ENST00000320755 GRM4Q14833 912 aa19.62■□□□□ 0.73
COL9A1-201ENST00000320755 TERF2Q15554 542 aa19.62■□□□□ 0.73
COL9A1-201ENST00000320755 NAALADL2Q58DX5 795 aa19.62■□□□□ 0.73
COL9A1-201ENST00000320755 WNK3Q9BYP7 1800 aa19.62■□□□□ 0.73
COL9A1-201ENST00000320755 NAPAP54920 295 aa19.62■□□□□ 0.73
COL9A1-201ENST00000320755 NAA15Q9BXJ9 866 aaKnown RBP19.62■□□□□ 0.73
COL9A1-201ENST00000320755 PARD6BQ9BYG5 372 aa19.62■□□□□ 0.73
COL9A1-201ENST00000320755 LIMA1Q9UHB6 759 aaKnown RBP19.62■□□□□ 0.73
COL9A1-201ENST00000320755 LAMB2P55268 1798 aa19.62■□□□□ 0.73
COL9A1-201ENST00000320755 CHP1Q99653 195 aa19.61■□□□□ 0.73
COL9A1-201ENST00000320755 ABHD10Q9NUJ1 306 aa19.61■□□□□ 0.73
COL9A1-201ENST00000320755 PARP1P09874 1014 aaKnown RBP19.61■□□□□ 0.73
COL9A1-201ENST00000320755 SLC35F6Q8N357 371 aa19.61■□□□□ 0.73
COL9A1-201ENST00000320755 TRIM47Q96LD4 638 aa19.61■□□□□ 0.73
COL9A1-201ENST00000320755 PYM1Q9BRP8 204 aaKnown RBP19.61■□□□□ 0.73
COL9A1-201ENST00000320755 ERICH4A6NGS2 130 aa19.6■□□□□ 0.73
COL9A1-201ENST00000320755 CCNT1O60563 726 aaKnown RBP19.6■□□□□ 0.73
COL9A1-201ENST00000320755 PLA2G4AP47712 749 aa19.6■□□□□ 0.73
COL9A1-201ENST00000320755 GNAQP50148 359 aa19.6■□□□□ 0.73
COL9A1-201ENST00000320755 MYH8P13535 1937 aa19.6■□□□□ 0.73
COL9A1-201ENST00000320755 SCN7AQ01118 1682 aa19.6■□□□□ 0.73
COL9A1-201ENST00000320755 STXBP3O00186 592 aa19.6■□□□□ 0.73
COL9A1-201ENST00000320755 RASA1P20936 1047 aa19.6■□□□□ 0.73
COL9A1-201ENST00000320755 BTDP43251 543 aa19.6■□□□□ 0.73
COL9A1-201ENST00000320755 UBA5Q9GZZ9 404 aa19.6■□□□□ 0.73
COL9A1-201ENST00000320755 FAM53CQ9NYF3 392 aa19.6■□□□□ 0.73
COL9A1-201ENST00000320755 SPAG1Q07617 926 aa19.6■□□□□ 0.73
COL9A1-201ENST00000320755 IRF2BP1Q8IU81 584 aa19.6■□□□□ 0.73
COL9A1-201ENST00000320755 EYA3Q99504 573 aa19.6■□□□□ 0.73
COL9A1-201ENST00000320755 PDS5AQ29RF7 1337 aaKnown RBP19.59■□□□□ 0.73
COL9A1-201ENST00000320755 CCDC178Q5BJE1 867 aa19.59■□□□□ 0.73
COL9A1-201ENST00000320755 ZNF804AQ7Z570 1209 aa19.59■□□□□ 0.73
COL9A1-201ENST00000320755 GPR161Q8N6U8 529 aaKnown RBP19.59■□□□□ 0.73
COL9A1-201ENST00000320755 CNBD1Q8NA66 436 aa19.59■□□□□ 0.73
COL9A1-201ENST00000320755 CCDC148Q8NFR7 591 aa19.59■□□□□ 0.73
COL9A1-201ENST00000320755 LRRC15Q8TF66 581 aa19.59■□□□□ 0.73
COL9A1-201ENST00000320755 GOLGA1Q92805 767 aa19.59■□□□□ 0.73
COL9A1-201ENST00000320755 SH3GLB2Q9NR46 395 aa19.59■□□□□ 0.73
COL9A1-201ENST00000320755 BARHL2Q9NY43 387 aa19.59■□□□□ 0.73
COL9A1-201ENST00000320755 TFR2Q9UP52 801 aa19.59■□□□□ 0.73
COL9A1-201ENST00000320755 UFL1O94874 794 aa19.59■□□□□ 0.73
COL9A1-201ENST00000320755 ZRANB2O95218 330 aaKnown RBP eCLIP19.59■□□□□ 0.73
COL9A1-201ENST00000320755 CHMP4BP1P59074 171 aa19.59■□□□□ 0.73
COL9A1-201ENST00000320755 JAKMIP3Q5VZ66 844 aa19.59■□□□□ 0.73
COL9A1-201ENST00000320755 TMTC1Q8IUR5 882 aa19.59■□□□□ 0.73
COL9A1-201ENST00000320755 TEX11Q8IYF3 940 aa19.59■□□□□ 0.73
COL9A1-201ENST00000320755 TRIM10Q9UDY6 481 aa19.59■□□□□ 0.73
COL9A1-201ENST00000320755 SMCO2A6NFE2 343 aa19.58■□□□□ 0.73
COL9A1-201ENST00000320755 LRRC10BA6NIK2 292 aa19.58■□□□□ 0.73
COL9A1-201ENST00000320755 TECP42680 631 aa19.58■□□□□ 0.73
COL9A1-201ENST00000320755 GSTO1P78417 241 aa19.58■□□□□ 0.73
COL9A1-201ENST00000320755 GRAPQ13588 217 aa19.58■□□□□ 0.73
COL9A1-201ENST00000320755 TRAPPC3LQ5T215 181 aa19.58■□□□□ 0.73
COL9A1-201ENST00000320755 ADSSL1Q8N142 457 aa19.58■□□□□ 0.73
COL9A1-201ENST00000320755 GRAPLQ8TC17 118 aaPredicted RBP19.58■□□□□ 0.73
COL9A1-201ENST00000320755 ZCCHC17Q9NP64 241 aaKnown RBP19.58■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms