RNA–Protein interactions for RNA: ENST00000319172.9

TMEM39A-201, Transcript of transmembrane protein 39A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMEM39A, Length 4,369 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39A-201ENST00000319172 TCRBV5S4A2TA0A5A2 114 aa10.44□□□□□ -0.74
TMEM39A-201ENST00000319172 ZBED4O75132 1171 aa10.44□□□□□ -0.74
TMEM39A-201ENST00000319172 GALNT17Q6IS24 598 aa10.44□□□□□ -0.74
TMEM39A-201ENST00000319172 CDC42EP5Q6NZY7 148 aa10.44□□□□□ -0.74
TMEM39A-201ENST00000319172 C11orf57Q6ZUT1 292 aaPredicted RBP10.44□□□□□ -0.74
TMEM39A-201ENST00000319172 NEDD1Q8NHV4 660 aa10.44□□□□□ -0.74
TMEM39A-201ENST00000319172 NAP1L4Q99733 375 aaKnown RBP10.44□□□□□ -0.74
TMEM39A-201ENST00000319172 HERC4Q5GLZ8 1057 aaPredicted RBP10.44□□□□□ -0.74
TMEM39A-201ENST00000319172 STRIP1Q5VSL9 837 aa10.44□□□□□ -0.74
TMEM39A-201ENST00000319172 DCAF15Q66K64 600 aa10.44□□□□□ -0.74
TMEM39A-201ENST00000319172 TMED8Q6PL24 325 aaPredicted RBP10.44□□□□□ -0.74
TMEM39A-201ENST00000319172 CLEC17AQ6ZS10 378 aa10.44□□□□□ -0.74
TMEM39A-201ENST00000319172 SYNRGQ9UMZ2 1314 aa10.44□□□□□ -0.74
TMEM39A-201ENST00000319172 SMIM22K7EJ46 135 aa10.44□□□□□ -0.74
TMEM39A-201ENST00000319172 TRAF5O00463 557 aa10.44□□□□□ -0.74
TMEM39A-201ENST00000319172 STXBP4Q6ZWJ1 553 aa10.44□□□□□ -0.74
TMEM39A-201ENST00000319172 MTA3Q9BTC8 594 aa10.44□□□□□ -0.74
TMEM39A-201ENST00000319172 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP10.44□□□□□ -0.74
TMEM39A-201ENST00000319172 DDX25Q9UHL0 483 aaKnown RBP10.44□□□□□ -0.74
TMEM39A-201ENST00000319172 RIC1Q4ADV7 1423 aa10.44□□□□□ -0.74
TMEM39A-201ENST00000319172 FAM205CA6NFA0 338 aa10.44□□□□□ -0.74
TMEM39A-201ENST00000319172 EEF2P13639 858 aaKnown RBP10.44□□□□□ -0.74
TMEM39A-201ENST00000319172 DDIT3P35638 169 aa10.44□□□□□ -0.74
TMEM39A-201ENST00000319172 USP8P40818 1118 aa10.44□□□□□ -0.74
TMEM39A-201ENST00000319172 SNW1Q13573 536 aaKnown RBP10.44□□□□□ -0.74
TMEM39A-201ENST00000319172 PFKFB3Q16875 520 aaPredicted RBP10.44□□□□□ -0.74
TMEM39A-201ENST00000319172 LONRF3Q496Y0 759 aa10.44□□□□□ -0.74
TMEM39A-201ENST00000319172 HAUS3Q68CZ6 603 aa10.44□□□□□ -0.74
TMEM39A-201ENST00000319172 PPP4R3AQ6IN85 833 aa10.44□□□□□ -0.74
TMEM39A-201ENST00000319172 XPO4Q9C0E2 1151 aaKnown RBP10.44□□□□□ -0.74
TMEM39A-201ENST00000319172 RGPD2P0DJD1 1756 aa10.43□□□□□ -0.74
TMEM39A-201ENST00000319172 CYP4A11Q02928 519 aa10.43□□□□□ -0.74
TMEM39A-201ENST00000319172 PAK1Q13153 545 aa10.43□□□□□ -0.74
TMEM39A-201ENST00000319172 KIF4BQ2VIQ3 1234 aa10.43□□□□□ -0.74
TMEM39A-201ENST00000319172 SBK1Q52WX2 424 aa10.43□□□□□ -0.74
TMEM39A-201ENST00000319172 TMEM179Q6ZVK1 233 aa10.43□□□□□ -0.74
TMEM39A-201ENST00000319172 GPIHBP1Q8IV16 184 aa10.43□□□□□ -0.74
TMEM39A-201ENST00000319172 SULF1Q8IWU6 871 aa10.43□□□□□ -0.74
TMEM39A-201ENST00000319172 CCDC65Q8IXS2 484 aa10.43□□□□□ -0.74
TMEM39A-201ENST00000319172 SMYD4Q8IYR2 804 aaPredicted RBP10.43□□□□□ -0.74
TMEM39A-201ENST00000319172 CSGALNACT2Q8N6G5 542 aa10.43□□□□□ -0.74
TMEM39A-201ENST00000319172 GOLPH3LQ9H4A5 285 aa10.43□□□□□ -0.74
TMEM39A-201ENST00000319172 RRAGDQ9NQL2 400 aaPredicted RBP10.43□□□□□ -0.74
TMEM39A-201ENST00000319172 BICDL2A1A5D9 508 aa10.43□□□□□ -0.74
TMEM39A-201ENST00000319172 HOOK2Q96ED9 719 aa10.43□□□□□ -0.74
TMEM39A-201ENST00000319172 OSBPL5Q9H0X9 879 aaPredicted RBP10.43□□□□□ -0.74
TMEM39A-201ENST00000319172 CCPG1Q9ULG6 757 aa10.43□□□□□ -0.74
TMEM39A-201ENST00000319172 STK36Q9NRP7 1315 aa10.43□□□□□ -0.74
TMEM39A-201ENST00000319172 LMO7Q8WWI1 1683 aa10.43□□□□□ -0.74
TMEM39A-201ENST00000319172 GPR75-ASB3A0A0A6YYF3 556 aa10.43□□□□□ -0.74
TMEM39A-201ENST00000319172 KIF5CO60282 957 aa10.43□□□□□ -0.74
TMEM39A-201ENST00000319172 RASA1P20936 1047 aa10.43□□□□□ -0.74
TMEM39A-201ENST00000319172 CLCN1P35523 988 aa10.43□□□□□ -0.74
TMEM39A-201ENST00000319172 TRAPPC10P48553 1259 aa10.43□□□□□ -0.74
TMEM39A-201ENST00000319172 ARID5AQ03989 594 aa10.43□□□□□ -0.74
TMEM39A-201ENST00000319172 CDC37Q16543 378 aaPredicted RBP10.43□□□□□ -0.74
TMEM39A-201ENST00000319172 NELFCDQ8IXH7 590 aa10.43□□□□□ -0.74
TMEM39A-201ENST00000319172 BICD1Q96G01 975 aa10.43□□□□□ -0.74
TMEM39A-201ENST00000319172 ZFP91Q96JP5 570 aaPredicted RBP10.43□□□□□ -0.74
TMEM39A-201ENST00000319172 FANCLQ9NW38 375 aa10.43□□□□□ -0.74
TMEM39A-201ENST00000319172 ARGLU1Q9NWB6 273 aaPredicted RBP10.43□□□□□ -0.74
TMEM39A-201ENST00000319172 TAB2Q9NYJ8 693 aa10.43□□□□□ -0.74
TMEM39A-201ENST00000319172 ROBO1Q9Y6N7 1651 aa10.43□□□□□ -0.74
TMEM39A-201ENST00000319172 BAZ2BQ9UIF8 2168 aaKnown RBP10.42□□□□□ -0.74
TMEM39A-201ENST00000319172 USP17L10C9JJH3 530 aa10.42□□□□□ -0.74
TMEM39A-201ENST00000319172 HOXA13P31271 388 aaPredicted RBP10.42□□□□□ -0.74
TMEM39A-201ENST00000319172 GNG11P61952 73 aa10.42□□□□□ -0.74
TMEM39A-201ENST00000319172 DPY19L2Q6NUT2 758 aa10.42□□□□□ -0.74
TMEM39A-201ENST00000319172 TPH2Q8IWU9 490 aa10.42□□□□□ -0.74
TMEM39A-201ENST00000319172 CSADQ9Y600 493 aa10.42□□□□□ -0.74
TMEM39A-201ENST00000319172 GCOM1H8Y6P7 765 aaPredicted RBP10.42□□□□□ -0.74
TMEM39A-201ENST00000319172 AKR1B10O60218 316 aa10.42□□□□□ -0.74
TMEM39A-201ENST00000319172 POLR2MP0CAP2 368 aa10.42□□□□□ -0.74
TMEM39A-201ENST00000319172 NFIAQ12857 509 aa10.42□□□□□ -0.74
TMEM39A-201ENST00000319172 GRM4Q14833 912 aa10.42□□□□□ -0.74
TMEM39A-201ENST00000319172 PTPN21Q16825 1174 aa10.42□□□□□ -0.74
TMEM39A-201ENST00000319172 PAGR1Q9BTK6 254 aa10.42□□□□□ -0.74
TMEM39A-201ENST00000319172 SORBS3O60504 671 aa10.42□□□□□ -0.74
TMEM39A-201ENST00000319172 ST3GAL1Q11201 340 aa10.42□□□□□ -0.74
TMEM39A-201ENST00000319172 NELFBQ8WX92 580 aa10.42□□□□□ -0.74
TMEM39A-201ENST00000319172 SPAG5Q96R06 1193 aa10.42□□□□□ -0.74
TMEM39A-201ENST00000319172 DNM3Q9UQ16 869 aa10.42□□□□□ -0.74
TMEM39A-201ENST00000319172 SUGT1Q9Y2Z0 365 aa10.42□□□□□ -0.74
TMEM39A-201ENST00000319172 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP10.42□□□□□ -0.74
TMEM39A-201ENST00000319172 GAS7O60861 476 aa10.42□□□□□ -0.74
TMEM39A-201ENST00000319172 CASP1P29466 404 aa10.42□□□□□ -0.74
TMEM39A-201ENST00000319172 STAT2P52630 851 aa10.42□□□□□ -0.74
TMEM39A-201ENST00000319172 HS1BP3Q53T59 392 aa10.42□□□□□ -0.74
TMEM39A-201ENST00000319172 SYDE2Q5VT97 1194 aa10.42□□□□□ -0.74
TMEM39A-201ENST00000319172 TTBK2Q6IQ55 1244 aa10.42□□□□□ -0.74
TMEM39A-201ENST00000319172 CNNM4Q6P4Q7 775 aa10.42□□□□□ -0.74
TMEM39A-201ENST00000319172 ZNF341Q9BYN7 854 aa10.42□□□□□ -0.74
TMEM39A-201ENST00000319172 SRPRBQ9Y5M8 271 aaKnown RBP10.42□□□□□ -0.74
TMEM39A-201ENST00000319172 TESPA1A2RU30 521 aaPredicted RBP10.41□□□□□ -0.74
TMEM39A-201ENST00000319172 USP17L15C9J2P7 530 aa10.41□□□□□ -0.74
TMEM39A-201ENST00000319172 USP17L13C9JLJ4 530 aa10.41□□□□□ -0.74
TMEM39A-201ENST00000319172 USP17L11C9JVI0 530 aa10.41□□□□□ -0.74
TMEM39A-201ENST00000319172 USP17L18D6R9N7 530 aa10.41□□□□□ -0.74
TMEM39A-201ENST00000319172 USP17L22D6RA61 530 aa10.41□□□□□ -0.74
TMEM39A-201ENST00000319172 USP17L17D6RBQ6 530 aa10.41□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 65.7 ms