RNA–Protein interactions for RNA: ENST00000317677.9

CPNE1-201, Transcript of copine 1, humanhuman

TSL 1 (best) BASIC

Gene CPNE1, Length 1,961 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-201ENST00000317677 CPVLQ9H3G5 476 aa14.87□□□□□ -0.03
CPNE1-201ENST00000317677 SERPINB13Q9UIV8 391 aa14.87□□□□□ -0.03
CPNE1-201ENST00000317677 SERPINA10Q9UK55 444 aa14.87□□□□□ -0.03
CPNE1-201ENST00000317677 ZC3H4Q9UPT8 1303 aaKnown RBP14.87□□□□□ -0.03
CPNE1-201ENST00000317677 MYH4Q9Y623 1939 aa14.87□□□□□ -0.03
CPNE1-201ENST00000317677 PPP6R2O75170 966 aa14.87□□□□□ -0.03
CPNE1-201ENST00000317677 RASSF7Q02833 373 aa14.87□□□□□ -0.03
CPNE1-201ENST00000317677 SHROOM1Q2M3G4 852 aaPredicted RBP14.87□□□□□ -0.03
CPNE1-201ENST00000317677 TYW1BQ6NUM6 668 aa14.87□□□□□ -0.03
CPNE1-201ENST00000317677 FBXO38Q6PIJ6 1188 aa14.87□□□□□ -0.03
CPNE1-201ENST00000317677 RTKN2Q8IZC4 609 aa14.87□□□□□ -0.03
CPNE1-201ENST00000317677 IDI2Q9BXS1 227 aa14.87□□□□□ -0.03
CPNE1-201ENST00000317677 MTMR4Q9NYA4 1195 aa14.87□□□□□ -0.03
CPNE1-201ENST00000317677 PCDHB6Q9Y5E3 794 aa14.87□□□□□ -0.03
CPNE1-201ENST00000317677 MRVI1Q9Y6F6 885 aa14.87□□□□□ -0.03
CPNE1-201ENST00000317677 PTGS1P23219 599 aa14.86□□□□□ -0.03
CPNE1-201ENST00000317677 RBM5P52756 815 aaKnown RBP eCLIP14.86□□□□□ -0.032e-6■■■□□ 15.7
CPNE1-201ENST00000317677 TYRO3Q06418 890 aa14.86□□□□□ -0.03
CPNE1-201ENST00000317677 TCP10Q12799 353 aa14.86□□□□□ -0.03
CPNE1-201ENST00000317677 TEX35Q5T0J7 233 aa14.86□□□□□ -0.03
CPNE1-201ENST00000317677 CEP135Q66GS9 1140 aa14.86□□□□□ -0.03
CPNE1-201ENST00000317677 SHC4Q6S5L8 630 aa14.86□□□□□ -0.03
CPNE1-201ENST00000317677 PRMT6Q96LA8 375 aaPredicted RBP14.86□□□□□ -0.03
CPNE1-201ENST00000317677 C16orf45Q96MC5 204 aaPredicted RBP14.86□□□□□ -0.03
CPNE1-201ENST00000317677 CLIC6Q96NY7 704 aa14.86□□□□□ -0.03
CPNE1-201ENST00000317677 GMLQ99445 158 aa14.86□□□□□ -0.03
CPNE1-201ENST00000317677 CABP5Q9NP86 173 aa14.86□□□□□ -0.03
CPNE1-201ENST00000317677 MYO3BQ8WXR4 1341 aa14.86□□□□□ -0.03
CPNE1-201ENST00000317677 FAM196BA6NMK8 535 aa14.85□□□□□ -0.03
CPNE1-201ENST00000317677 TOP1P11387 765 aaKnown RBP14.85□□□□□ -0.03
CPNE1-201ENST00000317677 H2AFXP16104 143 aaPredicted RBP14.85□□□□□ -0.03
CPNE1-201ENST00000317677 KRT2P35908 639 aa14.85□□□□□ -0.03
CPNE1-201ENST00000317677 GRIN1Q05586 938 aa14.85□□□□□ -0.03
CPNE1-201ENST00000317677 CFAP100Q494V2 611 aa14.85□□□□□ -0.03
CPNE1-201ENST00000317677 ICE2Q659A1 982 aa14.85□□□□□ -0.03
CPNE1-201ENST00000317677 USP17L2Q6R6M4 530 aa14.85□□□□□ -0.03
CPNE1-201ENST00000317677 CCDC73Q6ZRK6 1079 aa14.85□□□□□ -0.03
CPNE1-201ENST00000317677 GPKOWQ92917 476 aaPredicted RBP eCLIP14.85□□□□□ -0.031e-7■■■■□ 26.1
CPNE1-201ENST00000317677 EHD4Q9H223 541 aa14.85□□□□□ -0.03
CPNE1-201ENST00000317677 TDRD3Q9H7E2 651 aaKnown RBP14.85□□□□□ -0.03
CPNE1-201ENST00000317677 EIF4ENIF1Q9NRA8 985 aaKnown RBP14.85□□□□□ -0.03
CPNE1-201ENST00000317677 PSMD14O00487 310 aa14.85□□□□□ -0.03
CPNE1-201ENST00000317677 RAD17O75943 681 aa14.85□□□□□ -0.03
CPNE1-201ENST00000317677 CMA1P23946 247 aa14.85□□□□□ -0.03
CPNE1-201ENST00000317677 CASQ1P31415 396 aa14.85□□□□□ -0.03
CPNE1-201ENST00000317677 GRIPAP1Q4V328 841 aa14.85□□□□□ -0.03
CPNE1-201ENST00000317677 KCND1Q9NSA2 647 aa14.85□□□□□ -0.03
CPNE1-201ENST00000317677 ZNF446Q9NWS9 450 aa14.85□□□□□ -0.03
CPNE1-201ENST00000317677 SWAP70Q9UH65 585 aa14.85□□□□□ -0.03
CPNE1-201ENST00000317677 DICER1Q9UPY3 1922 aaKnown RBP14.85□□□□□ -0.03
CPNE1-201ENST00000317677 USP17L5A8MUK1 530 aa14.84□□□□□ -0.03
CPNE1-201ENST00000317677 NFKBIEO00221 500 aa14.84□□□□□ -0.03
CPNE1-201ENST00000317677 VIL1P09327 827 aaKnown RBP14.84□□□□□ -0.03
CPNE1-201ENST00000317677 PFKFB1P16118 471 aa14.84□□□□□ -0.03
CPNE1-201ENST00000317677 GTF2A1P52655 376 aaPredicted RBP14.84□□□□□ -0.03
CPNE1-201ENST00000317677 EIF6P56537 245 aaKnown RBP14.84□□□□□ -0.03
CPNE1-201ENST00000317677 RILPL1Q5EBL4 403 aa14.84□□□□□ -0.03
CPNE1-201ENST00000317677 RSBN1LQ6PCB5 846 aaPredicted RBP14.84□□□□□ -0.03
CPNE1-201ENST00000317677 LRRC47Q8N1G4 583 aaKnown RBP14.84□□□□□ -0.03
CPNE1-201ENST00000317677 LARGE2Q8N3Y3 721 aa14.84□□□□□ -0.03
CPNE1-201ENST00000317677 NCAPGQ9BPX3 1015 aa14.84□□□□□ -0.03
CPNE1-201ENST00000317677 TAOK3Q9H2K8 898 aa14.84□□□□□ -0.03
CPNE1-201ENST00000317677 FBXO2Q9UK22 296 aaPredicted RBP14.84□□□□□ -0.03
CPNE1-201ENST00000317677 ZNF215Q9UL58 517 aaPredicted RBP14.84□□□□□ -0.03
CPNE1-201ENST00000317677 HPSEQ9Y251 543 aa14.84□□□□□ -0.03
CPNE1-201ENST00000317677 FAM237AA0A1B0GTK4 181 aa14.84□□□□□ -0.03
CPNE1-201ENST00000317677 NPM3O75607 178 aaKnown RBP14.84□□□□□ -0.03
CPNE1-201ENST00000317677 CCDC192P0DO97 292 aa14.84□□□□□ -0.03
CPNE1-201ENST00000317677 XBP1P17861 261 aa14.84□□□□□ -0.03
CPNE1-201ENST00000317677 WWC2Q6AWC2 1192 aa14.84□□□□□ -0.03
CPNE1-201ENST00000317677 SPC24Q8NBT2 197 aa14.84□□□□□ -0.03
CPNE1-201ENST00000317677 ERCC4Q92889 916 aaPredicted RBP14.84□□□□□ -0.03
CPNE1-201ENST00000317677 MYCBPQ99417 103 aaPredicted RBP14.84□□□□□ -0.03
CPNE1-201ENST00000317677 ZBTB12Q9Y330 459 aaPredicted RBP14.84□□□□□ -0.03
CPNE1-201ENST00000317677 FHOD1Q9Y613 1164 aa14.84□□□□□ -0.03
CPNE1-201ENST00000317677 LTBP3Q9NS15 1303 aa14.83□□□□□ -0.03
CPNE1-201ENST00000317677 A0A087WWV3 80 aa14.83□□□□□ -0.04
CPNE1-201ENST00000317677 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP14.83□□□□□ -0.04
CPNE1-201ENST00000317677 KLRF2D3W0D1 207 aa14.83□□□□□ -0.04
CPNE1-201ENST00000317677 ATP8B1O43520 1251 aa14.83□□□□□ -0.04
CPNE1-201ENST00000317677 NEMFO60524 1076 aa14.83□□□□□ -0.04
CPNE1-201ENST00000317677 HLA-DOAP06340 250 aa14.83□□□□□ -0.04
CPNE1-201ENST00000317677 PDHBP11177 359 aa14.83□□□□□ -0.04
CPNE1-201ENST00000317677 GUCY2CP25092 1073 aa14.83□□□□□ -0.04
CPNE1-201ENST00000317677 GNAQP50148 359 aa14.83□□□□□ -0.04
CPNE1-201ENST00000317677 TPM4P67936 248 aa14.83□□□□□ -0.04
CPNE1-201ENST00000317677 TPD52L1Q16890 204 aaPredicted RBP14.83□□□□□ -0.04
CPNE1-201ENST00000317677 RESP18Q5W5W9 173 aa14.83□□□□□ -0.04
CPNE1-201ENST00000317677 NYAP1Q6ZVC0 841 aa14.83□□□□□ -0.04
CPNE1-201ENST00000317677 CCDC186Q7Z3E2 898 aa14.83□□□□□ -0.04
CPNE1-201ENST00000317677 FAM200AQ8TCP9 573 aa14.83□□□□□ -0.04
CPNE1-201ENST00000317677 SPZ1Q9BXG8 430 aa14.83□□□□□ -0.04
CPNE1-201ENST00000317677 V9GYY5 206 aaPredicted RBP14.83□□□□□ -0.04
CPNE1-201ENST00000317677 M0R2N6 131 aa14.82□□□□□ -0.04
CPNE1-201ENST00000317677 KINO60870 393 aaKnown RBP14.82□□□□□ -0.04
CPNE1-201ENST00000317677 PARP1P09874 1014 aaKnown RBP14.82□□□□□ -0.04
CPNE1-201ENST00000317677 SNHG28P0DPA3 235 aa14.82□□□□□ -0.04
CPNE1-201ENST00000317677 ATP2B1P20020 1258 aa14.82□□□□□ -0.04
CPNE1-201ENST00000317677 BCCIPQ9P287 314 aaKnown RBP eCLIP14.82□□□□□ -0.04
CPNE1-201ENST00000317677 ATRNL1Q5VV63 1379 aa14.82□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms