RNA–Protein interactions for RNA: ENST00000308394.8

CASP3-201, Transcript of caspase 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CASP3, Length 2,673 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASP3-201ENST00000308394 KIF28PB7ZC32 967 aa12.31□□□□□ -0.44
CASP3-201ENST00000308394 CYTH3O43739 400 aa12.31□□□□□ -0.44
CASP3-201ENST00000308394 MMP1P03956 469 aa12.31□□□□□ -0.44
CASP3-201ENST00000308394 SCG2P13521 617 aa12.31□□□□□ -0.44
CASP3-201ENST00000308394 SLC20A2Q08357 652 aa12.31□□□□□ -0.44
CASP3-201ENST00000308394 CSPP1Q1MSJ5 1256 aa12.31□□□□□ -0.44
CASP3-201ENST00000308394 ASPRV1Q53RT3 343 aa12.31□□□□□ -0.44
CASP3-201ENST00000308394 KCTD1Q719H9 257 aa12.31□□□□□ -0.44
CASP3-201ENST00000308394 HOMER1Q86YM7 354 aa12.31□□□□□ -0.44
CASP3-201ENST00000308394 SIAH1Q8IUQ4 282 aa12.31□□□□□ -0.44
CASP3-201ENST00000308394 ZBTB21Q9ULJ3 1066 aa12.31□□□□□ -0.44
CASP3-201ENST00000308394 CAP2P40123 477 aa12.31□□□□□ -0.44
CASP3-201ENST00000308394 SSR1P43307 286 aaKnown RBP12.31□□□□□ -0.44
CASP3-201ENST00000308394 PFKFB3Q16875 520 aaPredicted RBP12.31□□□□□ -0.44
CASP3-201ENST00000308394 SKOR2Q2VWA4 1001 aaPredicted RBP12.31□□□□□ -0.44
CASP3-201ENST00000308394 FRMD4AQ9P2Q2 1039 aaPredicted RBP12.31□□□□□ -0.44
CASP3-201ENST00000308394 CFAP45Q9UL16 551 aa12.31□□□□□ -0.44
CASP3-201ENST00000308394 BTBD18B2RXH4 712 aa12.3□□□□□ -0.44
CASP3-201ENST00000308394 RIOK3O14730 519 aaKnown RBP12.3□□□□□ -0.44
CASP3-201ENST00000308394 NRDCO43847 1150 aa12.3□□□□□ -0.44
CASP3-201ENST00000308394 SNHG28P0DPA3 235 aa12.3□□□□□ -0.44
CASP3-201ENST00000308394 VEGFAP15692 232 aaPredicted RBP12.3□□□□□ -0.44
CASP3-201ENST00000308394 SLC1A4P43007 532 aa12.3□□□□□ -0.44
CASP3-201ENST00000308394 MAP3K10Q02779 954 aa12.3□□□□□ -0.44
CASP3-201ENST00000308394 MTA1Q13330 715 aa12.3□□□□□ -0.44
CASP3-201ENST00000308394 SLFN13Q68D06 897 aa12.3□□□□□ -0.44
CASP3-201ENST00000308394 BRAPQ7Z569 592 aa12.3□□□□□ -0.44
CASP3-201ENST00000308394 DIS3L2Q8IYB7 885 aaKnown RBP12.3□□□□□ -0.44
CASP3-201ENST00000308394 ANKRD13AQ8IZ07 590 aa12.3□□□□□ -0.44
CASP3-201ENST00000308394 SPATA32Q96LK8 384 aa12.3□□□□□ -0.44
CASP3-201ENST00000308394 ZNF396Q96N95 335 aaPredicted RBP12.3□□□□□ -0.44
CASP3-201ENST00000308394 SCAND2PQ9GZW5 306 aaPredicted RBP12.3□□□□□ -0.44
CASP3-201ENST00000308394 ARHGEF10LQ9HCE6 1279 aa12.3□□□□□ -0.44
CASP3-201ENST00000308394 F5H6K3 240 aa12.3□□□□□ -0.44
CASP3-201ENST00000308394 KLRC3Q07444 240 aa12.3□□□□□ -0.44
CASP3-201ENST00000308394 ZNF543Q08ER8 600 aa12.3□□□□□ -0.44
CASP3-201ENST00000308394 SLC35G1Q2M3R5 365 aa12.3□□□□□ -0.44
CASP3-201ENST00000308394 GPKOWQ92917 476 aaPredicted RBP eCLIP12.3□□□□□ -0.44
CASP3-201ENST00000308394 RRP36Q96EU6 259 aaKnown RBP12.3□□□□□ -0.44
CASP3-201ENST00000308394 SPZ1Q9BXG8 430 aa12.3□□□□□ -0.44
CASP3-201ENST00000308394 SEC63Q9UGP8 760 aaKnown RBP12.3□□□□□ -0.44
CASP3-201ENST00000308394 GADD45BO75293 160 aaPredicted RBP12.29□□□□□ -0.44
CASP3-201ENST00000308394 ASNSP08243 561 aa12.29□□□□□ -0.44
CASP3-201ENST00000308394 ECE1P42892 770 aa12.29□□□□□ -0.44
CASP3-201ENST00000308394 NLRP5P59047 1200 aa12.29□□□□□ -0.44
CASP3-201ENST00000308394 GPATCH4Q5T3I0 446 aaKnown RBP12.29□□□□□ -0.44
CASP3-201ENST00000308394 TTBK2Q6IQ55 1244 aa12.29□□□□□ -0.44
CASP3-201ENST00000308394 KRBA2Q6ZNG9 492 aa12.29□□□□□ -0.44
CASP3-201ENST00000308394 HEATR3Q7Z4Q2 680 aa12.29□□□□□ -0.44
CASP3-201ENST00000308394 BORCS6Q96GS4 357 aa12.29□□□□□ -0.44
CASP3-201ENST00000308394 TRAIPQ9BWF2 469 aa12.29□□□□□ -0.44
CASP3-201ENST00000308394 FTOQ9C0B1 505 aaKnown RBP eCLIP12.29□□□□□ -0.44
CASP3-201ENST00000308394 BAZ2BQ9UIF8 2168 aaKnown RBP12.29□□□□□ -0.44
CASP3-201ENST00000308394 GREB1LQ9C091 1923 aaPredicted RBP12.29□□□□□ -0.44
CASP3-201ENST00000308394 A0A1W2PRG0 241 aa12.29□□□□□ -0.44
CASP3-201ENST00000308394 PHF20L1A8MW92 1017 aa12.29□□□□□ -0.44
CASP3-201ENST00000308394 KIF20AO95235 890 aa12.29□□□□□ -0.44
CASP3-201ENST00000308394 SLC16A2P36021 539 aa12.29□□□□□ -0.44
CASP3-201ENST00000308394 SATB1Q01826 763 aa12.29□□□□□ -0.44
CASP3-201ENST00000308394 MYSM1Q5VVJ2 828 aa12.29□□□□□ -0.44
CASP3-201ENST00000308394 DCAF15Q66K64 600 aa12.29□□□□□ -0.44
CASP3-201ENST00000308394 ANKRD23Q86SG2 305 aa12.29□□□□□ -0.44
CASP3-201ENST00000308394 DCPSQ96C86 337 aaKnown RBP12.29□□□□□ -0.44
CASP3-201ENST00000308394 SHISA4Q96DD7 197 aa12.29□□□□□ -0.44
CASP3-201ENST00000308394 USP28Q96RU2 1077 aa12.29□□□□□ -0.44
CASP3-201ENST00000308394 PIGSQ96S52 555 aa12.29□□□□□ -0.44
CASP3-201ENST00000308394 PHF20Q9BVI0 1012 aa12.29□□□□□ -0.44
CASP3-201ENST00000308394 TCHHQ07283 1943 aa12.28□□□□□ -0.44
CASP3-201ENST00000308394 U2AF2P26368 475 aaKnown RBP eCLIP12.28□□□□□ -0.44
CASP3-201ENST00000308394 SMARCA1P28370 1054 aa12.28□□□□□ -0.44
CASP3-201ENST00000308394 NR5A1Q13285 461 aa12.28□□□□□ -0.44
CASP3-201ENST00000308394 CREBRFQ8IUR6 639 aa12.28□□□□□ -0.44
CASP3-201ENST00000308394 SPICE1Q8N0Z3 855 aa12.28□□□□□ -0.44
CASP3-201ENST00000308394 TMEM87AQ8NBN3 555 aa12.28□□□□□ -0.44
CASP3-201ENST00000308394 ACER1Q8TDN7 264 aa12.28□□□□□ -0.44
CASP3-201ENST00000308394 HOOK2Q96ED9 719 aa12.28□□□□□ -0.44
CASP3-201ENST00000308394 BRMS1Q9HCU9 246 aa12.28□□□□□ -0.44
CASP3-201ENST00000308394 KRT2P35908 639 aa12.28□□□□□ -0.44
CASP3-201ENST00000308394 IKQ13123 557 aaPredicted RBP12.28□□□□□ -0.44
CASP3-201ENST00000308394 ZYXQ15942 572 aaKnown RBP12.28□□□□□ -0.44
CASP3-201ENST00000308394 ZNF280DQ6N043 979 aa12.28□□□□□ -0.44
CASP3-201ENST00000308394 CCDC84Q86UT8 332 aaPredicted RBP12.28□□□□□ -0.44
CASP3-201ENST00000308394 NOSTRINQ8IVI9 506 aa12.28□□□□□ -0.44
CASP3-201ENST00000308394 GMCL1P1Q8NEA9 526 aa12.28□□□□□ -0.44
CASP3-201ENST00000308394 GPT2Q8TD30 523 aa12.28□□□□□ -0.44
CASP3-201ENST00000308394 OXER1Q8TDS5 423 aa12.28□□□□□ -0.44
CASP3-201ENST00000308394 DCAF4Q8WV16 495 aa12.28□□□□□ -0.44
CASP3-201ENST00000308394 LEO1Q8WVC0 666 aaPredicted RBP12.28□□□□□ -0.44
CASP3-201ENST00000308394 NUP88Q99567 741 aaPredicted RBP12.28□□□□□ -0.44
CASP3-201ENST00000308394 FOXP1Q9H334 677 aaPredicted RBP12.28□□□□□ -0.44
CASP3-201ENST00000308394 RIOX1Q9H6W3 641 aa12.28□□□□□ -0.44
CASP3-201ENST00000308394 FZD1Q9UP38 647 aa12.28□□□□□ -0.44
CASP3-201ENST00000308394 MYH4Q9Y623 1939 aa12.28□□□□□ -0.44
CASP3-201ENST00000308394 GLTPD2A6NH11 291 aa12.27□□□□□ -0.44
CASP3-201ENST00000308394 NDUFB10O96000 172 aa12.27□□□□□ -0.44
CASP3-201ENST00000308394 KLHL40Q2TBA0 621 aa12.27□□□□□ -0.44
CASP3-201ENST00000308394 WWC2Q6AWC2 1192 aa12.27□□□□□ -0.44
CASP3-201ENST00000308394 ATL3Q6DD88 541 aa12.27□□□□□ -0.44
CASP3-201ENST00000308394 ADGRF4Q8IZF3 695 aa12.27□□□□□ -0.44
CASP3-201ENST00000308394 MYH6P13533 1939 aa12.27□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms