RNA–Protein interactions for RNA: ENST00000307106.3

SMIM4-201, Transcript of small integral membrane protein 4, humanhuman

TSL 2 BASIC

Gene SMIM4, Length 274 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM4-201ENST00000307106 IRX5P78411 483 aaPredicted RBP14.38□□□□□ -0.11
SMIM4-201ENST00000307106 EVX2Q03828 476 aa14.38□□□□□ -0.11
SMIM4-201ENST00000307106 TMEM179Q6ZVK1 233 aa14.38□□□□□ -0.11
SMIM4-201ENST00000307106 OTOP2Q7RTS6 562 aa14.38□□□□□ -0.11
SMIM4-201ENST00000307106 ALYREFQ86V81 257 aaKnown RBP14.38□□□□□ -0.11
SMIM4-201ENST00000307106 ARHGEF10LQ9HCE6 1279 aa14.38□□□□□ -0.11
SMIM4-201ENST00000307106 ZHX1Q9UKY1 873 aaPredicted RBP14.38□□□□□ -0.11
SMIM4-201ENST00000307106 ADAMTS5Q9UNA0 930 aa14.38□□□□□ -0.11
SMIM4-201ENST00000307106 MYH7P12883 1935 aa14.38□□□□□ -0.11
SMIM4-201ENST00000307106 PTPRSQ13332 1948 aa14.38□□□□□ -0.11
SMIM4-201ENST00000307106 PIEZO1Q92508 2521 aa14.38□□□□□ -0.11
SMIM4-201ENST00000307106 MYOGP15173 224 aa14.37□□□□□ -0.11
SMIM4-201ENST00000307106 STAT3P40763 770 aa14.37□□□□□ -0.11
SMIM4-201ENST00000307106 CLEC10AQ8IUN9 316 aa14.37□□□□□ -0.11
SMIM4-201ENST00000307106 MSL3Q8N5Y2 521 aaKnown RBP14.37□□□□□ -0.11
SMIM4-201ENST00000307106 SH2D4AQ9H788 454 aa14.37□□□□□ -0.11
SMIM4-201ENST00000307106 VCPKMTQ9H867 229 aa14.37□□□□□ -0.11
SMIM4-201ENST00000307106 TMX2Q9Y320 296 aa14.37□□□□□ -0.11
SMIM4-201ENST00000307106 BRWD1Q9NSI6 2320 aa14.37□□□□□ -0.11
SMIM4-201ENST00000307106 ANP32CO43423 234 aa14.36□□□□□ -0.11
SMIM4-201ENST00000307106 GPR37L1O60883 481 aa14.36□□□□□ -0.11
SMIM4-201ENST00000307106 SNAI1O95863 264 aaPredicted RBP14.36□□□□□ -0.11
SMIM4-201ENST00000307106 CD4P01730 458 aa14.36□□□□□ -0.11
SMIM4-201ENST00000307106 GNAI2P04899 355 aa14.36□□□□□ -0.11
SMIM4-201ENST00000307106 COPB2P35606 906 aa14.36□□□□□ -0.11
SMIM4-201ENST00000307106 SIAH1Q8IUQ4 282 aa14.36□□□□□ -0.11
SMIM4-201ENST00000307106 RIOK1Q9BRS2 568 aaKnown RBP14.36□□□□□ -0.11
SMIM4-201ENST00000307106 SPC25Q9HBM1 224 aa14.36□□□□□ -0.11
SMIM4-201ENST00000307106 C11orf16Q9NQ32 467 aa14.36□□□□□ -0.11
SMIM4-201ENST00000307106 FBXO28Q9NVF7 368 aa14.36□□□□□ -0.11
SMIM4-201ENST00000307106 MCM9Q9NXL9 1143 aa14.36□□□□□ -0.11
SMIM4-201ENST00000307106 ZNF214Q9UL59 606 aaPredicted RBP14.36□□□□□ -0.11
SMIM4-201ENST00000307106 PCDHA11Q9Y5I1 949 aa14.36□□□□□ -0.11
SMIM4-201ENST00000307106 TANC1Q9C0D5 1861 aa14.35□□□□□ -0.11
SMIM4-201ENST00000307106 GREB1LQ9C091 1923 aaPredicted RBP14.35□□□□□ -0.11
SMIM4-201ENST00000307106 FAM86C2PA6NEL3 165 aa14.35□□□□□ -0.11
SMIM4-201ENST00000307106 ADCY6O43306 1168 aa14.35□□□□□ -0.11
SMIM4-201ENST00000307106 GTPBP6O43824 516 aaPredicted RBP14.35□□□□□ -0.11
SMIM4-201ENST00000307106 TLL1O43897 1013 aa14.35□□□□□ -0.11
SMIM4-201ENST00000307106 ICA1Q05084 483 aa14.35□□□□□ -0.11
SMIM4-201ENST00000307106 OS9Q13438 667 aaPredicted RBP14.35□□□□□ -0.11
SMIM4-201ENST00000307106 GNASQ5JWF2 1037 aa14.35□□□□□ -0.11
SMIM4-201ENST00000307106 MAMDC4Q6UXC1 1216 aa14.35□□□□□ -0.11
SMIM4-201ENST00000307106 KHSRPQ92945 711 aaKnown RBP eCLIP14.35□□□□□ -0.11
SMIM4-201ENST00000307106 UPF3AQ9H1J1 476 aaKnown RBP14.35□□□□□ -0.11
SMIM4-201ENST00000307106 HIPK3Q9H422 1215 aa14.35□□□□□ -0.11
SMIM4-201ENST00000307106 DBNLQ9UJU6 430 aaKnown RBP14.35□□□□□ -0.11
SMIM4-201ENST00000307106 COG5Q9UP83 839 aa14.35□□□□□ -0.11
SMIM4-201ENST00000307106 MTCH2Q9Y6C9 303 aa14.35□□□□□ -0.11
SMIM4-201ENST00000307106 SLC4A7Q9Y6M7 1214 aa14.35□□□□□ -0.11
SMIM4-201ENST00000307106 UMODL1Q5DID0 1318 aa14.35□□□□□ -0.11
SMIM4-201ENST00000307106 TRIP12Q14669 1992 aaPredicted RBP14.34□□□□□ -0.11
SMIM4-201ENST00000307106 RFXAPO00287 272 aa14.34□□□□□ -0.11
SMIM4-201ENST00000307106 VWA5AO00534 786 aa14.34□□□□□ -0.11
SMIM4-201ENST00000307106 POU3F3P20264 500 aaPredicted RBP14.34□□□□□ -0.11
SMIM4-201ENST00000307106 GJA9P57773 515 aa14.34□□□□□ -0.11
SMIM4-201ENST00000307106 ACVR2BQ13705 512 aa14.34□□□□□ -0.11
SMIM4-201ENST00000307106 DDX11Q96FC9 970 aa14.34□□□□□ -0.11
SMIM4-201ENST00000307106 ANTXR1Q9H6X2 564 aa14.34□□□□□ -0.11
SMIM4-201ENST00000307106 TLR7Q9NYK1 1049 aaKnown RBP14.34□□□□□ -0.11
SMIM4-201ENST00000307106 SWAP70Q9UH65 585 aa14.34□□□□□ -0.11
SMIM4-201ENST00000307106 MAGEB6P1A0A0J9YX57 407 aa14.33□□□□□ -0.12
SMIM4-201ENST00000307106 ZBBXA8MT70 800 aa14.33□□□□□ -0.12
SMIM4-201ENST00000307106 AKR1B1P15121 316 aa14.33□□□□□ -0.12
SMIM4-201ENST00000307106 CCL23P55773 120 aa14.33□□□□□ -0.12
SMIM4-201ENST00000307106 CCDC144BQ3MJ40 725 aa14.33□□□□□ -0.12
SMIM4-201ENST00000307106 TMED8Q6PL24 325 aaPredicted RBP14.33□□□□□ -0.12
SMIM4-201ENST00000307106 REPS2Q8NFH8 660 aa14.33□□□□□ -0.12
SMIM4-201ENST00000307106 CRNKL1Q9BZJ0 848 aaKnown RBP14.33□□□□□ -0.12
SMIM4-201ENST00000307106 CDKN2AIPQ9NXV6 580 aaPredicted RBP14.33□□□□□ -0.12
SMIM4-201ENST00000307106 PPP1R9AQ9ULJ8 1098 aa14.33□□□□□ -0.12
SMIM4-201ENST00000307106 TET1Q8NFU7 2136 aa14.32□□□□□ -0.12
SMIM4-201ENST00000307106 DNAJC25-GNG10A0A024R161 153 aa14.32□□□□□ -0.12
SMIM4-201ENST00000307106 CT47B1P0C2W7 299 aaPredicted RBP14.32□□□□□ -0.12
SMIM4-201ENST00000307106 CYP2D6P10635 497 aa14.32□□□□□ -0.12
SMIM4-201ENST00000307106 ATP2A2P16615 1042 aaKnown RBP14.32□□□□□ -0.12
SMIM4-201ENST00000307106 ZNF467Q7Z7K2 595 aaPredicted RBP14.32□□□□□ -0.12
SMIM4-201ENST00000307106 RPUSD2Q8IZ73 545 aaKnown RBP14.32□□□□□ -0.12
SMIM4-201ENST00000307106 SDR42E1Q8WUS8 393 aa14.32□□□□□ -0.12
SMIM4-201ENST00000307106 ARHGAP45Q92619 1136 aa14.32□□□□□ -0.12
SMIM4-201ENST00000307106 CCDC8Q9H0W5 538 aaPredicted RBP14.32□□□□□ -0.12
SMIM4-201ENST00000307106 ABHD16BQ9H3Z7 469 aa14.32□□□□□ -0.12
SMIM4-201ENST00000307106 CERS4Q9HA82 394 aa14.32□□□□□ -0.12
SMIM4-201ENST00000307106 SIP14410 1827 aa14.31□□□□□ -0.12
SMIM4-201ENST00000307106 CTAGE5O15320 804 aa14.31□□□□□ -0.12
SMIM4-201ENST00000307106 CA3P07451 260 aa14.31□□□□□ -0.12
SMIM4-201ENST00000307106 BEX3Q00994 111 aa14.31□□□□□ -0.12
SMIM4-201ENST00000307106 TMEM67Q5HYA8 995 aa14.31□□□□□ -0.12
SMIM4-201ENST00000307106 KRT40Q6A162 431 aa14.31□□□□□ -0.12
SMIM4-201ENST00000307106 SNRNP48Q6IEG0 339 aaKnown RBP14.31□□□□□ -0.12
SMIM4-201ENST00000307106 HLA-CQ95604 372 aa14.31□□□□□ -0.12
SMIM4-201ENST00000307106 DYNLL2Q96FJ2 89 aa14.31□□□□□ -0.12
SMIM4-201ENST00000307106 NOC4LQ9BVI4 516 aaKnown RBP14.31□□□□□ -0.12
SMIM4-201ENST00000307106 TEX13BQ9BXU2 312 aa14.31□□□□□ -0.12
SMIM4-201ENST00000307106 WNT8AQ9H1J5 351 aa14.31□□□□□ -0.12
SMIM4-201ENST00000307106 DCP1AQ9NPI6 582 aaPredicted RBP14.31□□□□□ -0.12
SMIM4-201ENST00000307106 EPOPA6NHQ4 379 aa14.3□□□□□ -0.12
SMIM4-201ENST00000307106 PI4K2BG5E9Z4 385 aa14.3□□□□□ -0.12
SMIM4-201ENST00000307106 SMIM22K7EJ46 135 aa14.3□□□□□ -0.12
SMIM4-201ENST00000307106 RAD21O60216 631 aa14.3□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms