RNA–Protein interactions for RNA: ENST00000289547.8

NPC1L1-201, Transcript of NPC1 like intracellular cholesterol transporter 1, humanhuman

TSL 1 (best) BASIC

Gene NPC1L1, Length 5,048 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1L1-201ENST00000289547 FBXO38Q6PIJ6 1188 aa12.66□□□□□ -0.38
NPC1L1-201ENST00000289547 CACTINQ8WUQ7 758 aaKnown RBP12.66□□□□□ -0.38
NPC1L1-201ENST00000289547 FAM227BQ96M60 508 aa12.66□□□□□ -0.38
NPC1L1-201ENST00000289547 SELENOOQ9BVL4 669 aa12.66□□□□□ -0.38
NPC1L1-201ENST00000289547 SERPINB13Q9UIV8 391 aa12.66□□□□□ -0.38
NPC1L1-201ENST00000289547 CHD2O14647 1828 aaKnown RBP12.65□□□□□ -0.38
NPC1L1-201ENST00000289547 MMP14P50281 582 aa12.65□□□□□ -0.38
NPC1L1-201ENST00000289547 GNGT1P63211 74 aa12.65□□□□□ -0.38
NPC1L1-201ENST00000289547 MTX1Q13505 466 aa12.65□□□□□ -0.38
NPC1L1-201ENST00000289547 POLA2Q14181 598 aa12.65□□□□□ -0.38
NPC1L1-201ENST00000289547 CDC37L1Q7L3B6 337 aa12.65□□□□□ -0.38
NPC1L1-201ENST00000289547 LMNTD2Q8IXW0 634 aa12.65□□□□□ -0.38
NPC1L1-201ENST00000289547 RMND1Q9NWS8 449 aa12.65□□□□□ -0.38
NPC1L1-201ENST00000289547 SERPINA10Q9UK55 444 aa12.65□□□□□ -0.38
NPC1L1-201ENST00000289547 VIMP08670 466 aaKnown RBP12.65□□□□□ -0.38
NPC1L1-201ENST00000289547 SPATA24Q86W54 205 aa12.65□□□□□ -0.38
NPC1L1-201ENST00000289547 KIFC2Q96AC6 838 aa12.65□□□□□ -0.38
NPC1L1-201ENST00000289547 KDM6AO15550 1401 aaPredicted RBP12.65□□□□□ -0.38
NPC1L1-201ENST00000289547 ADCY9O60503 1353 aa12.65□□□□□ -0.38
NPC1L1-201ENST00000289547 CCT5P48643 541 aa12.65□□□□□ -0.38
NPC1L1-201ENST00000289547 PPP2R5AQ15172 486 aa12.65□□□□□ -0.38
NPC1L1-201ENST00000289547 ATL3Q6DD88 541 aa12.65□□□□□ -0.38
NPC1L1-201ENST00000289547 SGSM2O43147 1006 aa12.65□□□□□ -0.39
NPC1L1-201ENST00000289547 KRT2P35908 639 aa12.65□□□□□ -0.39
NPC1L1-201ENST00000289547 IRX5P78411 483 aaPredicted RBP12.65□□□□□ -0.39
NPC1L1-201ENST00000289547 IFI16Q16666 785 aaKnown RBP12.65□□□□□ -0.39
NPC1L1-201ENST00000289547 NSMFQ6X4W1 530 aa12.65□□□□□ -0.39
NPC1L1-201ENST00000289547 MICALL2Q8IY33 904 aa12.65□□□□□ -0.39
NPC1L1-201ENST00000289547 SDR42E1Q8WUS8 393 aa12.65□□□□□ -0.39
NPC1L1-201ENST00000289547 MRFAP1L1Q96HT8 127 aa12.65□□□□□ -0.39
NPC1L1-201ENST00000289547 MMRN2Q9H8L6 949 aa12.65□□□□□ -0.39
NPC1L1-201ENST00000289547 CNOT7Q9UIV1 285 aaKnown RBP12.65□□□□□ -0.39
NPC1L1-201ENST00000289547 MECOMQ03112 1051 aa12.64□□□□□ -0.39
NPC1L1-201ENST00000289547 RASGRF1Q13972 1273 aa12.64□□□□□ -0.39
NPC1L1-201ENST00000289547 MCTP2Q6DN12 878 aa12.64□□□□□ -0.39
NPC1L1-201ENST00000289547 CHST3Q7LGC8 479 aa12.64□□□□□ -0.39
NPC1L1-201ENST00000289547 FLOT1O75955 427 aa12.64□□□□□ -0.39
NPC1L1-201ENST00000289547 C9orf131Q5VYM1 1079 aa12.64□□□□□ -0.39
NPC1L1-201ENST00000289547 KANSL2Q9H9L4 492 aa12.64□□□□□ -0.39
NPC1L1-201ENST00000289547 RPAP1Q9BWH6 1393 aaPredicted RBP12.64□□□□□ -0.39
NPC1L1-201ENST00000289547 DKC1O60832 514 aaKnown RBP eCLIP12.64□□□□□ -0.39
NPC1L1-201ENST00000289547 CCT6AP40227 531 aaKnown RBP12.64□□□□□ -0.39
NPC1L1-201ENST00000289547 CLCN6P51797 869 aa12.64□□□□□ -0.39
NPC1L1-201ENST00000289547 TCERG1LQ5VWI1 586 aa12.64□□□□□ -0.39
NPC1L1-201ENST00000289547 UBA5Q9GZZ9 404 aa12.64□□□□□ -0.39
NPC1L1-201ENST00000289547 PSMA7O14818 248 aa12.64□□□□□ -0.39
NPC1L1-201ENST00000289547 SLC27A2O14975 620 aa12.64□□□□□ -0.39
NPC1L1-201ENST00000289547 ATP8B1O43520 1251 aa12.64□□□□□ -0.39
NPC1L1-201ENST00000289547 C8orf74Q6P047 294 aa12.64□□□□□ -0.39
NPC1L1-201ENST00000289547 UBLCP1Q8WVY7 318 aaPredicted RBP12.64□□□□□ -0.39
NPC1L1-201ENST00000289547 MCF2L2Q86YR7 1114 aa12.63□□□□□ -0.39
NPC1L1-201ENST00000289547 ADD2P35612 726 aa12.63□□□□□ -0.39
NPC1L1-201ENST00000289547 MAP3K9P80192 1104 aa12.63□□□□□ -0.39
NPC1L1-201ENST00000289547 ATP11AP98196 1134 aa12.63□□□□□ -0.39
NPC1L1-201ENST00000289547 SF3A3Q12874 501 aaKnown RBP eCLIP12.63□□□□□ -0.399e-7■■□□□ 11.7
NPC1L1-201ENST00000289547 LONRF3Q496Y0 759 aa12.63□□□□□ -0.39
NPC1L1-201ENST00000289547 HOOK3Q86VS8 718 aa12.63□□□□□ -0.39
NPC1L1-201ENST00000289547 EFCAB13Q8IY85 973 aa12.63□□□□□ -0.39
NPC1L1-201ENST00000289547 IFT74Q96LB3 600 aa12.63□□□□□ -0.39
NPC1L1-201ENST00000289547 TTC14Q96N46 770 aa12.63□□□□□ -0.39
NPC1L1-201ENST00000289547 SPAG5Q96R06 1193 aa12.63□□□□□ -0.39
NPC1L1-201ENST00000289547 STMN4Q9H169 189 aaPredicted RBP12.63□□□□□ -0.39
NPC1L1-201ENST00000289547 FEZ2Q9UHY8 353 aaPredicted RBP12.63□□□□□ -0.39
NPC1L1-201ENST00000289547 FRMD3A2A2Y4 597 aa12.63□□□□□ -0.39
NPC1L1-201ENST00000289547 ASNSP08243 561 aa12.63□□□□□ -0.39
NPC1L1-201ENST00000289547 GSPT1P15170 499 aaKnown RBP12.63□□□□□ -0.39
NPC1L1-201ENST00000289547 KCTD2Q14681 263 aa12.63□□□□□ -0.39
NPC1L1-201ENST00000289547 SLC10A5Q5PT55 438 aa12.63□□□□□ -0.39
NPC1L1-201ENST00000289547 BRAPQ7Z569 592 aa12.63□□□□□ -0.39
NPC1L1-201ENST00000289547 PPFIBP2Q8ND30 876 aa12.63□□□□□ -0.39
NPC1L1-201ENST00000289547 SEC62Q99442 399 aaKnown RBP12.63□□□□□ -0.39
NPC1L1-201ENST00000289547 MRPL11Q9Y3B7 192 aaKnown RBP12.63□□□□□ -0.39
NPC1L1-201ENST00000289547 SLIT3O75094 1523 aa12.63□□□□□ -0.39
NPC1L1-201ENST00000289547 E7EVH7 732 aa12.63□□□□□ -0.39
NPC1L1-201ENST00000289547 NR1I2O75469 434 aa12.63□□□□□ -0.39
NPC1L1-201ENST00000289547 TNNC1P63316 161 aa12.63□□□□□ -0.39
NPC1L1-201ENST00000289547 FOXO4P98177 505 aa12.63□□□□□ -0.39
NPC1L1-201ENST00000289547 ZBTB16Q05516 673 aa12.63□□□□□ -0.39
NPC1L1-201ENST00000289547 CCDC174Q6PII3 467 aa12.63□□□□□ -0.39
NPC1L1-201ENST00000289547 FAM71BQ8TC56 605 aa12.63□□□□□ -0.39
NPC1L1-201ENST00000289547 STIM2Q9P246 746 aa12.63□□□□□ -0.39
NPC1L1-201ENST00000289547 A0A087WUV0 522 aaPredicted RBP12.62□□□□□ -0.39
NPC1L1-201ENST00000289547 NOP56O00567 594 aaKnown RBP12.62□□□□□ -0.39
NPC1L1-201ENST00000289547 BACH1O14867 736 aa12.62□□□□□ -0.39
NPC1L1-201ENST00000289547 DEXIO95424 95 aa12.62□□□□□ -0.39
NPC1L1-201ENST00000289547 FAM47AQ5JRC9 791 aa12.62□□□□□ -0.39
NPC1L1-201ENST00000289547 EPHA10Q5JZY3 1008 aa12.62□□□□□ -0.39
NPC1L1-201ENST00000289547 KRI1Q8N9T8 703 aaKnown RBP12.62□□□□□ -0.39
NPC1L1-201ENST00000289547 EXOC4Q96A65 974 aa12.62□□□□□ -0.39
NPC1L1-201ENST00000289547 TBCAO75347 108 aaKnown RBP12.62□□□□□ -0.39
NPC1L1-201ENST00000289547 PNMA6AP0CW24 399 aaPredicted RBP12.62□□□□□ -0.39
NPC1L1-201ENST00000289547 DIXDC1Q155Q3 683 aa12.62□□□□□ -0.39
NPC1L1-201ENST00000289547 LONRF2Q1L5Z9 754 aa12.62□□□□□ -0.39
NPC1L1-201ENST00000289547 SLFN13Q68D06 897 aa12.62□□□□□ -0.39
NPC1L1-201ENST00000289547 RSBN1LQ6PCB5 846 aaPredicted RBP12.62□□□□□ -0.39
NPC1L1-201ENST00000289547 NCAPG2Q86XI2 1143 aa12.62□□□□□ -0.39
NPC1L1-201ENST00000289547 TACO1Q9BSH4 297 aaKnown RBP12.62□□□□□ -0.39
NPC1L1-201ENST00000289547 DESI2Q9BSY9 194 aa12.62□□□□□ -0.39
NPC1L1-201ENST00000289547 VPS33BQ9H267 617 aa12.62□□□□□ -0.39
NPC1L1-201ENST00000289547 ANKRD65E5RJM6 399 aa12.62□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 52.7 ms