RNA–Protein interactions for RNA: ENST00000264883.7

NUP54-201, Transcript of nucleoporin 54, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NUP54, Length 2,367 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-201ENST00000264883 TTMPQ5BVD1 217 aa14.68□□□□□ -0.06
NUP54-201ENST00000264883 NAA35Q5VZE5 725 aa14.68□□□□□ -0.06
NUP54-201ENST00000264883 CAGE1Q8TC20 777 aa14.68□□□□□ -0.06
NUP54-201ENST00000264883 CTAGE1Q96RT6 745 aa14.68□□□□□ -0.06
NUP54-201ENST00000264883 RUFY1Q96T51 708 aa14.68□□□□□ -0.06
NUP54-201ENST00000264883 MTA3Q9BTC8 594 aa14.68□□□□□ -0.06
NUP54-201ENST00000264883 ISCA1Q9BUE6 129 aa14.68□□□□□ -0.06
NUP54-201ENST00000264883 FOXP1Q9H334 677 aaPredicted RBP14.68□□□□□ -0.06
NUP54-201ENST00000264883 ABHD10Q9NUJ1 306 aa14.68□□□□□ -0.06
NUP54-201ENST00000264883 TRIM10Q9UDY6 481 aa14.68□□□□□ -0.06
NUP54-201ENST00000264883 RTN2O75298 545 aa14.67□□□□□ -0.06
NUP54-201ENST00000264883 STARD3NLO95772 234 aa14.67□□□□□ -0.06
NUP54-201ENST00000264883 EZRP15311 586 aaKnown RBP14.67□□□□□ -0.06
NUP54-201ENST00000264883 RCAN1P53805 252 aa14.67□□□□□ -0.06
NUP54-201ENST00000264883 PAPD7Q5XG87 772 aaKnown RBP14.67□□□□□ -0.06
NUP54-201ENST00000264883 CCDC70Q6NSX1 233 aa14.67□□□□□ -0.06
NUP54-201ENST00000264883 RAB11FIP4Q86YS3 637 aa14.67□□□□□ -0.06
NUP54-201ENST00000264883 ARL8AQ96BM9 186 aa14.67□□□□□ -0.06
NUP54-201ENST00000264883 RRP36Q96EU6 259 aaKnown RBP14.67□□□□□ -0.06
NUP54-201ENST00000264883 PUS3Q9BZE2 481 aaKnown RBP14.67□□□□□ -0.06
NUP54-201ENST00000264883 EPN3Q9H201 632 aa14.67□□□□□ -0.06
NUP54-201ENST00000264883 CYP19A1P11511 503 aaPredicted RBP14.67□□□□□ -0.06
NUP54-201ENST00000264883 IFNAR1P17181 557 aa14.67□□□□□ -0.06
NUP54-201ENST00000264883 SPECC1Q5M775 1068 aa14.67□□□□□ -0.06
NUP54-201ENST00000264883 SPATA1Q5VX52 437 aa14.67□□□□□ -0.06
NUP54-201ENST00000264883 SAMD1Q6SPF0 538 aaPredicted RBP14.67□□□□□ -0.06
NUP54-201ENST00000264883 CCDC50Q8IVM0 306 aa14.67□□□□□ -0.06
NUP54-201ENST00000264883 CNNM2Q9H8M5 875 aa14.67□□□□□ -0.06
NUP54-201ENST00000264883 EPB41L3Q9Y2J2 1087 aaPredicted RBP14.67□□□□□ -0.06
NUP54-201ENST00000264883 ITIH6Q6UXX5 1313 aa14.67□□□□□ -0.06
NUP54-201ENST00000264883 UBN2Q6ZU65 1347 aa14.67□□□□□ -0.06
NUP54-201ENST00000264883 TIAM2Q8IVF5 1701 aa14.66□□□□□ -0.06
NUP54-201ENST00000264883 FRMD3A2A2Y4 597 aa14.66□□□□□ -0.06
NUP54-201ENST00000264883 ADORA1P30542 326 aa14.66□□□□□ -0.06
NUP54-201ENST00000264883 ATP1A2P50993 1020 aa14.66□□□□□ -0.06
NUP54-201ENST00000264883 ZKSCAN8Q15776 578 aaPredicted RBP14.66□□□□□ -0.06
NUP54-201ENST00000264883 NFXL1Q6ZNB6 911 aa14.66□□□□□ -0.06
NUP54-201ENST00000264883 CYB5R4Q7L1T6 521 aa14.66□□□□□ -0.06
NUP54-201ENST00000264883 PARP9Q8IXQ6 854 aa14.66□□□□□ -0.06
NUP54-201ENST00000264883 SPATA20Q8TB22 786 aa14.66□□□□□ -0.06
NUP54-201ENST00000264883 IGDCC4Q8TDY8 1250 aa14.66□□□□□ -0.06
NUP54-201ENST00000264883 ZNF473Q8WTR7 871 aaKnown RBP14.66□□□□□ -0.06
NUP54-201ENST00000264883 AIFM3Q96NN9 605 aa14.66□□□□□ -0.06
NUP54-201ENST00000264883 SERTAD1Q9UHV2 236 aa14.66□□□□□ -0.06
NUP54-201ENST00000264883 FBXO2Q9UK22 296 aaPredicted RBP14.66□□□□□ -0.06
NUP54-201ENST00000264883 MMP1P03956 469 aa14.66□□□□□ -0.06
NUP54-201ENST00000264883 PDHBP11177 359 aa14.66□□□□□ -0.06
NUP54-201ENST00000264883 LSP1P33241 339 aa14.66□□□□□ -0.06
NUP54-201ENST00000264883 TBC1D8BQ0IIM8 1120 aa14.66□□□□□ -0.06
NUP54-201ENST00000264883 ALS2CLQ60I27 953 aa14.66□□□□□ -0.06
NUP54-201ENST00000264883 ZNF772Q68DY9 489 aaPredicted RBP14.66□□□□□ -0.06
NUP54-201ENST00000264883 TRIM22Q8IYM9 498 aa14.66□□□□□ -0.06
NUP54-201ENST00000264883 JAKMIP2Q96AA8 810 aa14.66□□□□□ -0.06
NUP54-201ENST00000264883 ACSBG1Q96GR2 724 aa14.66□□□□□ -0.06
NUP54-201ENST00000264883 GJD4Q96KN9 370 aaPredicted RBP14.66□□□□□ -0.06
NUP54-201ENST00000264883 LY9Q9HBG7 655 aa14.66□□□□□ -0.06
NUP54-201ENST00000264883 TAOK2Q9UL54 1235 aa14.66□□□□□ -0.06
NUP54-201ENST00000264883 KLHL33A6NCF5 533 aa14.65□□□□□ -0.06
NUP54-201ENST00000264883 HSF2BPO75031 334 aa14.65□□□□□ -0.06
NUP54-201ENST00000264883 PCCAP05165 728 aaPredicted RBP14.65□□□□□ -0.06
NUP54-201ENST00000264883 IFIT5Q13325 482 aaKnown RBP14.65□□□□□ -0.06
NUP54-201ENST00000264883 DRP2Q13474 957 aa14.65□□□□□ -0.06
NUP54-201ENST00000264883 IQCEQ6IPM2 695 aa14.65□□□□□ -0.06
NUP54-201ENST00000264883 MICU3Q86XE3 530 aa14.65□□□□□ -0.06
NUP54-201ENST00000264883 TBC1D10CQ8IV04 446 aa14.65□□□□□ -0.06
NUP54-201ENST00000264883 STK11IPQ8N1F8 1099 aa14.65□□□□□ -0.06
NUP54-201ENST00000264883 CCDC114Q96M63 670 aa14.65□□□□□ -0.06
NUP54-201ENST00000264883 NUP88Q99567 741 aaPredicted RBP14.65□□□□□ -0.06
NUP54-201ENST00000264883 HINFPQ9BQA5 517 aa14.65□□□□□ -0.06
NUP54-201ENST00000264883 HAUS4Q9H6D7 363 aa14.65□□□□□ -0.06
NUP54-201ENST00000264883 SRPRBQ9Y5M8 271 aaKnown RBP14.65□□□□□ -0.06
NUP54-201ENST00000264883 SLC12A7Q9Y666 1083 aa14.65□□□□□ -0.06
NUP54-201ENST00000264883 SYNRGQ9UMZ2 1314 aa14.65□□□□□ -0.06
NUP54-201ENST00000264883 GOLGA6L7A0A1B0GV03 622 aa14.65□□□□□ -0.07
NUP54-201ENST00000264883 POLR2DO15514 142 aaKnown RBP14.65□□□□□ -0.07
NUP54-201ENST00000264883 RANBP6O60518 1105 aaKnown RBP14.65□□□□□ -0.07
NUP54-201ENST00000264883 CSF1RP07333 972 aa14.65□□□□□ -0.07
NUP54-201ENST00000264883 CCNHP51946 323 aaPredicted RBP14.65□□□□□ -0.07
NUP54-201ENST00000264883 STX17P56962 302 aa14.65□□□□□ -0.07
NUP54-201ENST00000264883 C2orf54Q08AI8 447 aa14.65□□□□□ -0.07
NUP54-201ENST00000264883 GRIK3Q13003 919 aa14.65□□□□□ -0.07
NUP54-201ENST00000264883 IFT88Q13099 833 aa14.65□□□□□ -0.07
NUP54-201ENST00000264883 TCIRG1Q13488 830 aa14.65□□□□□ -0.07
NUP54-201ENST00000264883 TMEM67Q5HYA8 995 aa14.65□□□□□ -0.07
NUP54-201ENST00000264883 KLHL10Q6JEL2 608 aa14.65□□□□□ -0.07
NUP54-201ENST00000264883 GRAMD1CQ8IYS0 662 aa14.65□□□□□ -0.07
NUP54-201ENST00000264883 MAGEC3Q8TD91 643 aa14.65□□□□□ -0.07
NUP54-201ENST00000264883 KRT23Q9C075 422 aa14.65□□□□□ -0.07
NUP54-201ENST00000264883 REXO2Q9Y3B8 237 aaKnown RBP14.65□□□□□ -0.07
NUP54-201ENST00000264883 EPN1Q9Y6I3 576 aaPredicted RBP14.65□□□□□ -0.07
NUP54-201ENST00000264883 RIC1Q4ADV7 1423 aa14.64□□□□□ -0.07
NUP54-201ENST00000264883 NDUFA10O95299 355 aa14.64□□□□□ -0.07
NUP54-201ENST00000264883 INHBEP58166 350 aa14.64□□□□□ -0.07
NUP54-201ENST00000264883 SCARF1Q14162 830 aa14.64□□□□□ -0.07
NUP54-201ENST00000264883 NAA25Q14CX7 972 aa14.64□□□□□ -0.07
NUP54-201ENST00000264883 CDKAL1Q5VV42 579 aa14.64□□□□□ -0.07
NUP54-201ENST00000264883 TLDC1Q6P9B6 456 aa14.64□□□□□ -0.07
NUP54-201ENST00000264883 CYB5D1Q6P9G0 228 aa14.64□□□□□ -0.07
NUP54-201ENST00000264883 PHKBQ93100 1093 aa14.64□□□□□ -0.07
NUP54-201ENST00000264883 SCLT1Q96NL6 688 aa14.64□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms