RNA–Protein interactions for RNA: ENST00000262213.6

TRAM1-201, Transcript of translocation associated membrane protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAM1, Length 2,785 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAM1-201ENST00000262213 LRRC31Q6UY01 552 aa19.62■□□□□ 0.73
TRAM1-201ENST00000262213 TRAPPC11Q7Z392 1133 aa19.62■□□□□ 0.73
TRAM1-201ENST00000262213 PCMTD1Q96MG8 357 aaPredicted RBP19.62■□□□□ 0.73
TRAM1-201ENST00000262213 MTMR7Q9Y216 660 aa19.62■□□□□ 0.73
TRAM1-201ENST00000262213 SAR1BQ9Y6B6 198 aa19.62■□□□□ 0.73
TRAM1-201ENST00000262213 KLK7P49862 253 aa19.61■□□□□ 0.73
TRAM1-201ENST00000262213 USP14P54578 494 aa19.61■□□□□ 0.73
TRAM1-201ENST00000262213 TUBB4BP68371 445 aa19.61■□□□□ 0.73
TRAM1-201ENST00000262213 TMTC3Q6ZXV5 915 aa19.61■□□□□ 0.73
TRAM1-201ENST00000262213 IRF2BP1Q8IU81 584 aa19.61■□□□□ 0.73
TRAM1-201ENST00000262213 MB21D1Q8N884 522 aa19.61■□□□□ 0.73
TRAM1-201ENST00000262213 IGHMBP2P38935 993 aaKnown RBP19.61■□□□□ 0.73
TRAM1-201ENST00000262213 RCAN1P53805 252 aa19.61■□□□□ 0.73
TRAM1-201ENST00000262213 CTCFLQ8NI51 663 aaPredicted RBP19.61■□□□□ 0.73
TRAM1-201ENST00000262213 TRIM47Q96LD4 638 aa19.61■□□□□ 0.73
TRAM1-201ENST00000262213 BAZ2AQ9UIF9 1905 aaKnown RBP19.61■□□□□ 0.73
TRAM1-201ENST00000262213 MACROD2A1Z1Q3 448 aa19.61■□□□□ 0.73
TRAM1-201ENST00000262213 B4DLN1 442 aa19.61■□□□□ 0.73
TRAM1-201ENST00000262213 EIF5P55010 431 aaKnown RBP19.61■□□□□ 0.73
TRAM1-201ENST00000262213 MRPS25P82663 173 aaKnown RBP19.61■□□□□ 0.73
TRAM1-201ENST00000262213 DUSP10Q9Y6W6 482 aa19.61■□□□□ 0.73
TRAM1-201ENST00000262213 CYP27A1Q02318 531 aa19.6■□□□□ 0.73
TRAM1-201ENST00000262213 CHRNDQ07001 517 aa19.6■□□□□ 0.73
TRAM1-201ENST00000262213 GPKOWQ92917 476 aaPredicted RBP eCLIP19.6■□□□□ 0.73
TRAM1-201ENST00000262213 AGPAT5Q9NUQ2 364 aa19.6■□□□□ 0.73
TRAM1-201ENST00000262213 RBM28Q9NW13 759 aaKnown RBP19.6■□□□□ 0.73
TRAM1-201ENST00000262213 CNTNAP5Q8WYK1 1306 aa19.6■□□□□ 0.73
TRAM1-201ENST00000262213 TOGARAM1Q9Y4F4 1720 aa19.6■□□□□ 0.73
TRAM1-201ENST00000262213 SYF2O95926 243 aaKnown RBP19.6■□□□□ 0.73
TRAM1-201ENST00000262213 WDR93Q6P2C0 686 aa19.6■□□□□ 0.73
TRAM1-201ENST00000262213 WDR59Q6PJI9 974 aa19.6■□□□□ 0.73
TRAM1-201ENST00000262213 AFAP1L1Q8TED9 768 aa19.6■□□□□ 0.73
TRAM1-201ENST00000262213 JAKMIP2Q96AA8 810 aa19.6■□□□□ 0.73
TRAM1-201ENST00000262213 LACRTQ9GZZ8 138 aa19.6■□□□□ 0.73
TRAM1-201ENST00000262213 HAUS4Q9H6D7 363 aa19.6■□□□□ 0.73
TRAM1-201ENST00000262213 RCCD1A6NED2 376 aa19.59■□□□□ 0.73
TRAM1-201ENST00000262213 USP17L12C9JPN9 530 aa19.59■□□□□ 0.73
TRAM1-201ENST00000262213 USP17L21D6R901 530 aa19.59■□□□□ 0.73
TRAM1-201ENST00000262213 DRC1Q96MC2 740 aa19.59■□□□□ 0.73
TRAM1-201ENST00000262213 MTA3Q9BTC8 594 aa19.59■□□□□ 0.73
TRAM1-201ENST00000262213 RABEP2Q9H5N1 569 aa19.59■□□□□ 0.73
TRAM1-201ENST00000262213 JADE2Q9NQC1 790 aa19.59■□□□□ 0.73
TRAM1-201ENST00000262213 RMND1Q9NWS8 449 aa19.59■□□□□ 0.73
TRAM1-201ENST00000262213 MYBL2P10244 700 aa19.59■□□□□ 0.73
TRAM1-201ENST00000262213 C2orf54Q08AI8 447 aa19.59■□□□□ 0.73
TRAM1-201ENST00000262213 PPP2R5BQ15173 497 aa19.59■□□□□ 0.73
TRAM1-201ENST00000262213 PPP1R3FQ6ZSY5 799 aaPredicted RBP19.59■□□□□ 0.73
TRAM1-201ENST00000262213 MED4Q9NPJ6 270 aa19.59■□□□□ 0.73
TRAM1-201ENST00000262213 HPCAL4Q9UM19 191 aa19.59■□□□□ 0.73
TRAM1-201ENST00000262213 H7C1D1 291 aa19.58■□□□□ 0.73
TRAM1-201ENST00000262213 SCG2P13521 617 aa19.58■□□□□ 0.73
TRAM1-201ENST00000262213 TRIM21P19474 475 aaKnown RBP19.58■□□□□ 0.73
TRAM1-201ENST00000262213 CTR9Q6PD62 1173 aa19.58■□□□□ 0.73
TRAM1-201ENST00000262213 ZNF34Q8IZ26 560 aa19.58■□□□□ 0.73
TRAM1-201ENST00000262213 MAGEC2Q9UBF1 373 aaPredicted RBP19.58■□□□□ 0.73
TRAM1-201ENST00000262213 LGALS16A8MUM7 142 aa19.58■□□□□ 0.72
TRAM1-201ENST00000262213 PSMD14O00487 310 aa19.58■□□□□ 0.72
TRAM1-201ENST00000262213 STIM1Q13586 685 aa19.58■□□□□ 0.72
TRAM1-201ENST00000262213 BRINP3Q76B58 766 aa19.58■□□□□ 0.72
TRAM1-201ENST00000262213 DOCK2Q92608 1830 aa19.58■□□□□ 0.72
TRAM1-201ENST00000262213 MYH13Q9UKX3 1938 aa19.58■□□□□ 0.72
TRAM1-201ENST00000262213 GGCXP38435 758 aa19.57■□□□□ 0.72
TRAM1-201ENST00000262213 NUP98P52948 1817 aa19.57■□□□□ 0.72
TRAM1-201ENST00000262213 ADSSL1Q8N142 457 aa19.57■□□□□ 0.72
TRAM1-201ENST00000262213 SMCR8Q8TEV9 937 aaPredicted RBP19.57■□□□□ 0.72
TRAM1-201ENST00000262213 SMARCC1Q92922 1105 aaPredicted RBP19.57■□□□□ 0.72
TRAM1-201ENST00000262213 CRACR2AQ9BSW2 395 aa19.57■□□□□ 0.72
TRAM1-201ENST00000262213 FAM205AQ6ZU69 1335 aa19.56■□□□□ 0.72
TRAM1-201ENST00000262213 EIF3CLB5ME19 914 aaKnown RBP19.56■□□□□ 0.72
TRAM1-201ENST00000262213 PDE2AO00408 941 aaPredicted RBP19.56■□□□□ 0.72
TRAM1-201ENST00000262213 TUBBP07437 444 aa19.56■□□□□ 0.72
TRAM1-201ENST00000262213 IDEP14735 1019 aa19.56■□□□□ 0.72
TRAM1-201ENST00000262213 MATR3P43243 847 aaKnown RBP eCLIP19.56■□□□□ 0.72
TRAM1-201ENST00000262213 EIF3CQ99613 913 aaKnown RBP19.56■□□□□ 0.72
TRAM1-201ENST00000262213 RIOK1Q9BRS2 568 aaKnown RBP19.56■□□□□ 0.72
TRAM1-201ENST00000262213 ANAPC4Q9UJX5 808 aa19.56■□□□□ 0.72
TRAM1-201ENST00000262213 BCL9LQ86UU0 1499 aa19.56■□□□□ 0.72
TRAM1-201ENST00000262213 CYP2D6P10635 497 aa19.56■□□□□ 0.72
TRAM1-201ENST00000262213 MAP9Q49MG5 647 aa19.56■□□□□ 0.72
TRAM1-201ENST00000262213 MSL3Q8N5Y2 521 aaKnown RBP19.56■□□□□ 0.72
TRAM1-201ENST00000262213 PSMB7Q99436 277 aa19.56■□□□□ 0.72
TRAM1-201ENST00000262213 BCORQ6W2J9 1755 aa19.56■□□□□ 0.72
TRAM1-201ENST00000262213 KRT86O43790 486 aa19.55■□□□□ 0.72
TRAM1-201ENST00000262213 IPO7O95373 1038 aaKnown RBP19.55■□□□□ 0.72
TRAM1-201ENST00000262213 CALM1P0DP23 149 aa19.55■□□□□ 0.72
TRAM1-201ENST00000262213 CALM2P0DP24 149 aa19.55■□□□□ 0.72
TRAM1-201ENST00000262213 CALM3P0DP25 149 aa19.55■□□□□ 0.72
TRAM1-201ENST00000262213 CCDC152Q4G0S7 254 aa19.55■□□□□ 0.72
TRAM1-201ENST00000262213 FKBP15Q5T1M5 1219 aa19.55■□□□□ 0.72
TRAM1-201ENST00000262213 DNAJC7Q99615 494 aa19.55■□□□□ 0.72
TRAM1-201ENST00000262213 CAPN11Q9UMQ6 739 aa19.55■□□□□ 0.72
TRAM1-201ENST00000262213 SHANK3Q9BYB0 1731 aa19.55■□□□□ 0.72
TRAM1-201ENST00000262213 DISC1Q9NRI5 854 aa19.55■□□□□ 0.72
TRAM1-201ENST00000262213 ZNHIT6Q9NWK9 470 aaKnown RBP19.55■□□□□ 0.72
TRAM1-201ENST00000262213 KRT83P78385 493 aa19.55■□□□□ 0.72
TRAM1-201ENST00000262213 KRT26Q7Z3Y9 468 aa19.55■□□□□ 0.72
TRAM1-201ENST00000262213 CSGALNACT2Q8N6G5 542 aa19.55■□□□□ 0.72
TRAM1-201ENST00000262213 COG1Q8WTW3 980 aa19.55■□□□□ 0.72
TRAM1-201ENST00000262213 SELENOOQ9BVL4 669 aa19.55■□□□□ 0.72
TRAM1-201ENST00000262213 NHEJ1Q9H9Q4 299 aaPredicted RBP19.55■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms