RNA–Protein interactions for RNA: ENST00000258772.9

DDX56-201, Transcript of DEAD-box helicase 56, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DDX56, Length 2,336 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-201ENST00000258772 H7C1D1 291 aa17.19■□□□□ 0.34
DDX56-201ENST00000258772 TUBB2AQ13885 445 aa17.19■□□□□ 0.34
DDX56-201ENST00000258772 TRIM14Q14142 442 aa17.19■□□□□ 0.34
DDX56-201ENST00000258772 SLC4A8Q2Y0W8 1093 aa17.19■□□□□ 0.34
DDX56-201ENST00000258772 CYP26C1Q6V0L0 522 aa17.19■□□□□ 0.34
DDX56-201ENST00000258772 SMIM5Q71RC9 77 aa17.19■□□□□ 0.34
DDX56-201ENST00000258772 TXNRD3Q86VQ6 643 aa17.19■□□□□ 0.34
DDX56-201ENST00000258772 RASGRP4Q8TDF6 673 aa17.19■□□□□ 0.34
DDX56-201ENST00000258772 ANKS1AQ92625 1134 aa17.19■□□□□ 0.34
DDX56-201ENST00000258772 TUBB2BQ9BVA1 445 aa17.19■□□□□ 0.34
DDX56-201ENST00000258772 NYXQ9GZU5 481 aa17.19■□□□□ 0.34
DDX56-201ENST00000258772 JAG2Q9Y219 1238 aa17.19■□□□□ 0.34
DDX56-201ENST00000258772 M0R2N6 131 aa17.18■□□□□ 0.34
DDX56-201ENST00000258772 RGL2O15211 777 aa17.18■□□□□ 0.34
DDX56-201ENST00000258772 C12orf60Q5U649 245 aa17.18■□□□□ 0.34
DDX56-201ENST00000258772 WWC2Q6AWC2 1192 aa17.18■□□□□ 0.34
DDX56-201ENST00000258772 TYW1BQ6NUM6 668 aa17.18■□□□□ 0.34
DDX56-201ENST00000258772 CEP112Q8N8E3 955 aa17.18■□□□□ 0.34
DDX56-201ENST00000258772 MKRN1Q9UHC7 482 aaKnown RBP17.18■□□□□ 0.34
DDX56-201ENST00000258772 AHDC1Q5TGY3 1603 aaPredicted RBP17.18■□□□□ 0.34
DDX56-201ENST00000258772 CTAGE9A4FU28 777 aa17.18■□□□□ 0.34
DDX56-201ENST00000258772 CCDC151A5D8V7 595 aa17.18■□□□□ 0.34
DDX56-201ENST00000258772 ABL1P00519 1130 aa17.18■□□□□ 0.34
DDX56-201ENST00000258772 KRT9P35527 623 aa17.18■□□□□ 0.34
DDX56-201ENST00000258772 KIF4BQ2VIQ3 1234 aa17.18■□□□□ 0.34
DDX56-201ENST00000258772 NAALADL2Q58DX5 795 aa17.18■□□□□ 0.34
DDX56-201ENST00000258772 DTHD1Q6ZMT9 781 aa17.18■□□□□ 0.34
DDX56-201ENST00000258772 IRF2BP1Q8IU81 584 aa17.18■□□□□ 0.34
DDX56-201ENST00000258772 ADSSL1Q8N142 457 aa17.18■□□□□ 0.34
DDX56-201ENST00000258772 SLC35F6Q8N357 371 aa17.18■□□□□ 0.34
DDX56-201ENST00000258772 CCDC194A0A1B0GVG4 234 aa17.17■□□□□ 0.34
DDX56-201ENST00000258772 UBXN1Q04323 297 aa17.17■□□□□ 0.34
DDX56-201ENST00000258772 GRM4Q14833 912 aa17.17■□□□□ 0.34
DDX56-201ENST00000258772 SPTY2D1Q68D10 685 aaPredicted RBP17.17■□□□□ 0.34
DDX56-201ENST00000258772 BARGINQ6ZT62 677 aa17.17■□□□□ 0.34
DDX56-201ENST00000258772 DZIP1Q86YF9 867 aaKnown RBP17.17■□□□□ 0.34
DDX56-201ENST00000258772 SETDB2Q96T68 719 aa17.17■□□□□ 0.34
DDX56-201ENST00000258772 FUT8Q9BYC5 575 aa17.17■□□□□ 0.34
DDX56-201ENST00000258772 PUF60Q9UHX1 559 aaKnown RBP17.17■□□□□ 0.34
DDX56-201ENST00000258772 MAD2L2Q9UI95 211 aa17.17■□□□□ 0.34
DDX56-201ENST00000258772 MAST2Q6P0Q8 1798 aa17.17■□□□□ 0.34
DDX56-201ENST00000258772 PARP1P09874 1014 aaKnown RBP17.16■□□□□ 0.34
DDX56-201ENST00000258772 ARHGAP25P42331 645 aa17.16■□□□□ 0.34
DDX56-201ENST00000258772 GNAQP50148 359 aa17.16■□□□□ 0.34
DDX56-201ENST00000258772 BRD3Q15059 726 aa17.16■□□□□ 0.34
DDX56-201ENST00000258772 NBPF5PQ86XG9 351 aaPredicted RBP17.16■□□□□ 0.34
DDX56-201ENST00000258772 DYNLL2Q96FJ2 89 aa17.16■□□□□ 0.34
DDX56-201ENST00000258772 PCDHA6Q9UN73 950 aa17.16■□□□□ 0.34
DDX56-201ENST00000258772 PCDHA8Q9Y5H6 950 aa17.16■□□□□ 0.34
DDX56-201ENST00000258772 KDM4FA0A1W2PPD8 638 aa17.16■□□□□ 0.34
DDX56-201ENST00000258772 TRIM49BA6NDI0 452 aa17.16■□□□□ 0.34
DDX56-201ENST00000258772 NT5C2P49902 561 aa17.16■□□□□ 0.34
DDX56-201ENST00000258772 TMEM60Q9H2L4 133 aa17.16■□□□□ 0.34
DDX56-201ENST00000258772 MYO1AQ9UBC5 1043 aa17.16■□□□□ 0.34
DDX56-201ENST00000258772 ZNF831Q5JPB2 1677 aa17.16■□□□□ 0.34
DDX56-201ENST00000258772 PP2D1A8MPX8 630 aa17.15■□□□□ 0.34
DDX56-201ENST00000258772 POLR3GO15318 223 aaPredicted RBP17.15■□□□□ 0.34
DDX56-201ENST00000258772 CYP2C19P33261 490 aa17.15■□□□□ 0.34
DDX56-201ENST00000258772 USP5P45974 858 aa17.15■□□□□ 0.34
DDX56-201ENST00000258772 KCNB1Q14721 858 aa17.15■□□□□ 0.34
DDX56-201ENST00000258772 SLC35G1Q2M3R5 365 aa17.15■□□□□ 0.34
DDX56-201ENST00000258772 CCDC24Q8N4L8 307 aa17.15■□□□□ 0.34
DDX56-201ENST00000258772 ANKZF1Q9H8Y5 726 aa17.15■□□□□ 0.34
DDX56-201ENST00000258772 MKNK2Q9HBH9 465 aa17.15■□□□□ 0.34
DDX56-201ENST00000258772 NARFQ9UHQ1 456 aa17.15■□□□□ 0.34
DDX56-201ENST00000258772 CNTNAP4Q9C0A0 1308 aa17.15■□□□□ 0.34
DDX56-201ENST00000258772 IRS2Q9Y4H2 1338 aa17.15■□□□□ 0.34
DDX56-201ENST00000258772 USP17L3A6NCW0 530 aa17.15■□□□□ 0.34
DDX56-201ENST00000258772 USP17L4A6NCW7 530 aa17.15■□□□□ 0.34
DDX56-201ENST00000258772 KLRC4O43908 158 aa17.15■□□□□ 0.34
DDX56-201ENST00000258772 UBA7P41226 1012 aa17.15■□□□□ 0.34
DDX56-201ENST00000258772 TUBB4BP68371 445 aa17.15■□□□□ 0.34
DDX56-201ENST00000258772 SMC1AQ14683 1233 aaKnown RBP17.15■□□□□ 0.34
DDX56-201ENST00000258772 LONRF2Q1L5Z9 754 aa17.15■□□□□ 0.34
DDX56-201ENST00000258772 INF2Q27J81 1249 aa17.15■□□□□ 0.34
DDX56-201ENST00000258772 TAF3Q5VWG9 929 aa17.15■□□□□ 0.34
DDX56-201ENST00000258772 USP17L1Q7RTZ2 530 aa17.15■□□□□ 0.34
DDX56-201ENST00000258772 DAGLBQ8NCG7 672 aa17.15■□□□□ 0.34
DDX56-201ENST00000258772 CHP1Q99653 195 aa17.15■□□□□ 0.34
DDX56-201ENST00000258772 NAPGQ99747 312 aaPredicted RBP17.15■□□□□ 0.34
DDX56-201ENST00000258772 SLF1Q9BQI6 1058 aa17.15■□□□□ 0.34
DDX56-201ENST00000258772 CCSER1Q9C0I3 900 aa17.15■□□□□ 0.34
DDX56-201ENST00000258772 SRP68Q9UHB9 627 aaKnown RBP17.15■□□□□ 0.34
DDX56-201ENST00000258772 ZBTB22O15209 634 aa17.14■□□□□ 0.33
DDX56-201ENST00000258772 CYTH3O43739 400 aa17.14■□□□□ 0.33
DDX56-201ENST00000258772 MYL1P05976 194 aa17.14■□□□□ 0.33
DDX56-201ENST00000258772 TM4SF1P30408 202 aa17.14■□□□□ 0.33
DDX56-201ENST00000258772 PMS1P54277 932 aaKnown RBP17.14■□□□□ 0.33
DDX56-201ENST00000258772 CCDC178Q5BJE1 867 aa17.14■□□□□ 0.33
DDX56-201ENST00000258772 GALNT17Q6IS24 598 aa17.14■□□□□ 0.33
DDX56-201ENST00000258772 MB21D1Q8N884 522 aa17.14■□□□□ 0.33
DDX56-201ENST00000258772 CCDC148Q8NFR7 591 aa17.14■□□□□ 0.33
DDX56-201ENST00000258772 RASSF8Q8NHQ8 419 aa17.14■□□□□ 0.33
DDX56-201ENST00000258772 KBTBD4Q9NVX7 518 aa17.14■□□□□ 0.33
DDX56-201ENST00000258772 EPN1Q9Y6I3 576 aaPredicted RBP17.14■□□□□ 0.33
DDX56-201ENST00000258772 TTC26A0AVF1 554 aa17.14■□□□□ 0.33
DDX56-201ENST00000258772 CCDC66A2RUB6 948 aa17.14■□□□□ 0.33
DDX56-201ENST00000258772 TPTE2Q6XPS3 522 aa17.14■□□□□ 0.33
DDX56-201ENST00000258772 MSANTD4Q8NCY6 345 aa17.14■□□□□ 0.33
DDX56-201ENST00000258772 ZNF507Q8TCN5 953 aa17.14■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms