RNA–Protein interactions for RNA: ENST00000231656.12

CDX1-201, Transcript of caudal type homeobox 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDX1, Length 1,758 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDX1-201ENST00000231656 ASNSP08243 561 aa25.98■■□□□ 1.75
CDX1-201ENST00000231656 PDHBP11177 359 aa25.98■■□□□ 1.75
CDX1-201ENST00000231656 DLK2Q6UY11 383 aa25.98■■□□□ 1.75
CDX1-201ENST00000231656 V9GY48 417 aaPredicted RBP25.98■■□□□ 1.75
CDX1-201ENST00000231656 USP17L5A8MUK1 530 aa25.97■■□□□ 1.75
CDX1-201ENST00000231656 PPP6R2O75170 966 aa25.97■■□□□ 1.75
CDX1-201ENST00000231656 PARP1P09874 1014 aaKnown RBP25.97■■□□□ 1.75
CDX1-201ENST00000231656 CTNND1O60716 968 aaKnown RBP25.97■■□□□ 1.75
CDX1-201ENST00000231656 KINO60870 393 aaKnown RBP25.97■■□□□ 1.75
CDX1-201ENST00000231656 SNHG28P0DPA3 235 aa25.97■■□□□ 1.75
CDX1-201ENST00000231656 USP17L2Q6R6M4 530 aa25.97■■□□□ 1.75
CDX1-201ENST00000231656 FAM43AQ8N2R8 423 aa25.97■■□□□ 1.75
CDX1-201ENST00000231656 FRMD4AQ9P2Q2 1039 aaPredicted RBP25.97■■□□□ 1.75
CDX1-201ENST00000231656 ZNF112Q9UJU3 913 aa25.97■■□□□ 1.75
CDX1-201ENST00000231656 GOLGA8HP0CJ92 632 aa25.96■■□□□ 1.75
CDX1-201ENST00000231656 GNAQP50148 359 aa25.96■■□□□ 1.75
CDX1-201ENST00000231656 TOB1P50616 345 aaPredicted RBP25.96■■□□□ 1.75
CDX1-201ENST00000231656 TRIM44Q96DX7 344 aaPredicted RBP25.96■■□□□ 1.75
CDX1-201ENST00000231656 PHF20Q9BVI0 1012 aa25.96■■□□□ 1.75
CDX1-201ENST00000231656 VPS54Q9P1Q0 977 aa25.96■■□□□ 1.75
CDX1-201ENST00000231656 FZD1Q9UP38 647 aa25.96■■□□□ 1.75
CDX1-201ENST00000231656 A0A1B0GVL5 298 aa25.95■■□□□ 1.75
CDX1-201ENST00000231656 hCG_1642624A0A1W2PR95 340 aa25.95■■□□□ 1.75
CDX1-201ENST00000231656 A0A1W2PRG0 241 aa25.95■■□□□ 1.75
CDX1-201ENST00000231656 XBP1P17861 261 aa25.95■■□□□ 1.75
CDX1-201ENST00000231656 NDUFA8P51970 172 aa25.95■■□□□ 1.75
CDX1-201ENST00000231656 OXER1Q8TDS5 423 aa25.95■■□□□ 1.75
CDX1-201ENST00000231656 DOCK1Q14185 1865 aa25.95■■□□□ 1.74
CDX1-201ENST00000231656 CMA1P23946 247 aa25.95■■□□□ 1.74
CDX1-201ENST00000231656 INPP5BP32019 993 aa25.95■■□□□ 1.74
CDX1-201ENST00000231656 NR5A1Q13285 461 aa25.95■■□□□ 1.74
CDX1-201ENST00000231656 WRNIP1Q96S55 665 aa25.95■■□□□ 1.74
CDX1-201ENST00000231656 EIF4ENIF1Q9NRA8 985 aaKnown RBP25.95■■□□□ 1.74
CDX1-201ENST00000231656 GINM1Q9NU53 330 aa25.95■■□□□ 1.74
CDX1-201ENST00000231656 KLRF2D3W0D1 207 aa25.94■■□□□ 1.74
CDX1-201ENST00000231656 MARCKSP29966 332 aaPredicted RBP25.94■■□□□ 1.74
CDX1-201ENST00000231656 JMYQ8N9B5 988 aa25.94■■□□□ 1.74
CDX1-201ENST00000231656 ARHGEF10LQ9HCE6 1279 aa25.94■■□□□ 1.74
CDX1-201ENST00000231656 SYNPO2Q9UMS6 1093 aa25.94■■□□□ 1.74
CDX1-201ENST00000231656 VEGFAP15692 232 aaPredicted RBP25.93■■□□□ 1.74
CDX1-201ENST00000231656 ECE1P42892 770 aa25.93■■□□□ 1.74
CDX1-201ENST00000231656 ASPRV1Q53RT3 343 aa25.93■■□□□ 1.74
CDX1-201ENST00000231656 RILPL1Q5EBL4 403 aa25.93■■□□□ 1.74
CDX1-201ENST00000231656 SASS6Q6UVJ0 657 aa25.93■■□□□ 1.74
CDX1-201ENST00000231656 FAM200AQ8TCP9 573 aa25.93■■□□□ 1.74
CDX1-201ENST00000231656 ACER1Q8TDN7 264 aa25.93■■□□□ 1.74
CDX1-201ENST00000231656 KLRG1Q96E93 195 aa25.93■■□□□ 1.74
CDX1-201ENST00000231656 LZTS2Q9BRK4 669 aa25.93■■□□□ 1.74
CDX1-201ENST00000231656 RRAGCQ9HB90 399 aa25.93■■□□□ 1.74
CDX1-201ENST00000231656 POTEIP0CG38 1075 aa25.92■■□□□ 1.74
CDX1-201ENST00000231656 POTEJP0CG39 1038 aa25.92■■□□□ 1.74
CDX1-201ENST00000231656 GMCL1P1Q8NEA9 526 aa25.92■■□□□ 1.74
CDX1-201ENST00000231656 TMX2Q9Y320 296 aa25.92■■□□□ 1.74
CDX1-201ENST00000231656 FRMPD2Q68DX3 1309 aaPredicted RBP25.92■■□□□ 1.74
CDX1-201ENST00000231656 F5H6K3 240 aa25.92■■□□□ 1.74
CDX1-201ENST00000231656 KLRC3Q07444 240 aa25.92■■□□□ 1.74
CDX1-201ENST00000231656 ZNF543Q08ER8 600 aa25.92■■□□□ 1.74
CDX1-201ENST00000231656 SLC35G1Q2M3R5 365 aa25.92■■□□□ 1.74
CDX1-201ENST00000231656 ANO6Q4KMQ2 910 aa25.92■■□□□ 1.74
CDX1-201ENST00000231656 CCDC84Q86UT8 332 aaPredicted RBP25.92■■□□□ 1.74
CDX1-201ENST00000231656 CYTH3O43739 400 aa25.91■■□□□ 1.74
CDX1-201ENST00000231656 RAD21O60216 631 aa25.91■■□□□ 1.74
CDX1-201ENST00000231656 KRT2P35908 639 aa25.91■■□□□ 1.74
CDX1-201ENST00000231656 PRKG1Q13976 671 aa25.91■■□□□ 1.74
CDX1-201ENST00000231656 NPY5RQ15761 445 aa25.91■■□□□ 1.74
CDX1-201ENST00000231656 SLFN13Q68D06 897 aa25.91■■□□□ 1.74
CDX1-201ENST00000231656 SCYL3Q8IZE3 742 aa25.91■■□□□ 1.74
CDX1-201ENST00000231656 ZKSCAN4Q969J2 545 aaPredicted RBP25.91■■□□□ 1.74
CDX1-201ENST00000231656 GLIS2Q9BZE0 524 aaPredicted RBP25.91■■□□□ 1.74
CDX1-201ENST00000231656 CLEC11AQ9Y240 323 aa25.91■■□□□ 1.74
CDX1-201ENST00000231656 FAM237AA0A1B0GTK4 181 aa25.9■■□□□ 1.74
CDX1-201ENST00000231656 USP2O75604 605 aaPredicted RBP25.9■■□□□ 1.74
CDX1-201ENST00000231656 SCG2P13521 617 aa25.9■■□□□ 1.74
CDX1-201ENST00000231656 PFKFB1P16118 471 aa25.9■■□□□ 1.74
CDX1-201ENST00000231656 PFKFB3Q16875 520 aaPredicted RBP25.9■■□□□ 1.74
CDX1-201ENST00000231656 DCAF4Q8WV16 495 aa25.9■■□□□ 1.74
CDX1-201ENST00000231656 CDCA5Q96FF9 252 aa25.9■■□□□ 1.74
CDX1-201ENST00000231656 SPZ1Q9BXG8 430 aa25.9■■□□□ 1.74
CDX1-201ENST00000231656 CPVLQ9H3G5 476 aa25.9■■□□□ 1.74
CDX1-201ENST00000231656 CUTAO60888 179 aa25.9■■□□□ 1.74
CDX1-201ENST00000231656 NDUFB10O96000 172 aa25.9■■□□□ 1.74
CDX1-201ENST00000231656 SMARCA1P28370 1054 aa25.9■■□□□ 1.74
CDX1-201ENST00000231656 GPATCH4Q5T3I0 446 aaKnown RBP25.9■■□□□ 1.74
CDX1-201ENST00000231656 SHC4Q6S5L8 630 aa25.9■■□□□ 1.74
CDX1-201ENST00000231656 USP25Q9UHP3 1055 aa25.9■■□□□ 1.74
CDX1-201ENST00000231656 HPSEQ9Y251 543 aa25.9■■□□□ 1.74
CDX1-201ENST00000231656 SLC1A4P43007 532 aa25.89■■□□□ 1.73
CDX1-201ENST00000231656 CCDC96Q2M329 555 aa25.89■■□□□ 1.73
CDX1-201ENST00000231656 KCTD1Q719H9 257 aa25.89■■□□□ 1.73
CDX1-201ENST00000231656 DDX55Q8NHQ9 600 aaKnown RBP eCLIP25.89■■□□□ 1.73
CDX1-201ENST00000231656 TNFRSF25Q93038 417 aa25.89■■□□□ 1.73
CDX1-201ENST00000231656 GMCL1Q96IK5 515 aa25.89■■□□□ 1.73
CDX1-201ENST00000231656 SH2D4AQ9H788 454 aa25.89■■□□□ 1.73
CDX1-201ENST00000231656 GPCPD1Q9NPB8 672 aa25.89■■□□□ 1.73
CDX1-201ENST00000231656 RRAGDQ9NQL2 400 aaPredicted RBP25.89■■□□□ 1.73
CDX1-201ENST00000231656 PPP1R12BO60237 982 aaPredicted RBP25.88■■□□□ 1.73
CDX1-201ENST00000231656 HS1BP3Q53T59 392 aa25.88■■□□□ 1.73
CDX1-201ENST00000231656 RESP18Q5W5W9 173 aa25.88■■□□□ 1.73
CDX1-201ENST00000231656 PIBF1Q8WXW3 757 aa25.88■■□□□ 1.73
CDX1-201ENST00000231656 UBA5Q9GZZ9 404 aa25.88■■□□□ 1.73
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms