RNA–Protein interactions for RNA: ENST00000641587.1

PHGDH-222, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 566 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-222ENST00000641587 SIAH1Q8IUQ4 282 aa12.09□□□□□ -0.47
PHGDH-222ENST00000641587 ARRDC4Q8NCT1 418 aa12.09□□□□□ -0.47
PHGDH-222ENST00000641587 MAFAQ8NHW3 353 aaPredicted RBP12.09□□□□□ -0.47
PHGDH-222ENST00000641587 LENG1Q96BZ8 264 aaPredicted RBP12.09□□□□□ -0.47
PHGDH-222ENST00000641587 MAML3Q96JK9 1138 aa12.09□□□□□ -0.47
PHGDH-222ENST00000641587 CRNKL1Q9BZJ0 848 aaKnown RBP12.09□□□□□ -0.47
PHGDH-222ENST00000641587 BCL11AQ9H165 835 aa12.09□□□□□ -0.47
PHGDH-222ENST00000641587 SEMA6BQ9H3T3 888 aa12.09□□□□□ -0.47
PHGDH-222ENST00000641587 RWDD1Q9H446 243 aaPredicted RBP12.09□□□□□ -0.47
PHGDH-222ENST00000641587 DCP1AQ9NPI6 582 aaPredicted RBP12.09□□□□□ -0.47
PHGDH-222ENST00000641587 CYP2D7A0A087X1C5 515 aa12.08□□□□□ -0.48
PHGDH-222ENST00000641587 TCRBV5S4A2TA0A5A2 114 aa12.08□□□□□ -0.48
PHGDH-222ENST00000641587 GOLIM4O00461 696 aa12.08□□□□□ -0.48
PHGDH-222ENST00000641587 PRKAB2O43741 272 aa12.08□□□□□ -0.48
PHGDH-222ENST00000641587 HMMRO75330 724 aa12.08□□□□□ -0.48
PHGDH-222ENST00000641587 CHGBP05060 677 aa12.08□□□□□ -0.48
PHGDH-222ENST00000641587 PGK2P07205 417 aa12.08□□□□□ -0.48
PHGDH-222ENST00000641587 EPHB4P54760 987 aa12.08□□□□□ -0.48
PHGDH-222ENST00000641587 TMEM179Q6ZVK1 233 aa12.08□□□□□ -0.48
PHGDH-222ENST00000641587 RPAP2Q8IXW5 612 aaPredicted RBP12.08□□□□□ -0.48
PHGDH-222ENST00000641587 SHCBP1Q8NEM2 672 aa12.08□□□□□ -0.48
PHGDH-222ENST00000641587 DNAJC2Q99543 621 aaKnown RBP12.08□□□□□ -0.48
PHGDH-222ENST00000641587 ARMT1Q9H993 441 aa12.08□□□□□ -0.48
PHGDH-222ENST00000641587 FBXO28Q9NVF7 368 aa12.08□□□□□ -0.48
PHGDH-222ENST00000641587 HOXC10Q9NYD6 342 aa12.08□□□□□ -0.48
PHGDH-222ENST00000641587 APBB1O00213 710 aa12.07□□□□□ -0.48
PHGDH-222ENST00000641587 STRNO43815 780 aa12.07□□□□□ -0.48
PHGDH-222ENST00000641587 PGK1P00558 417 aa12.07□□□□□ -0.48
PHGDH-222ENST00000641587 TAL1P17542 331 aaPredicted RBP12.07□□□□□ -0.48
PHGDH-222ENST00000641587 TLE2Q04725 743 aa12.07□□□□□ -0.48
PHGDH-222ENST00000641587 ICA1Q05084 483 aa12.07□□□□□ -0.48
PHGDH-222ENST00000641587 TMEM132BQ14DG7 1078 aa12.07□□□□□ -0.48
PHGDH-222ENST00000641587 VCPKMTQ9H867 229 aa12.07□□□□□ -0.48
PHGDH-222ENST00000641587 HDAC1Q13547 482 aaPredicted RBP12.06□□□□□ -0.48
PHGDH-222ENST00000641587 CENPQQ7L2Z9 268 aaPredicted RBP12.06□□□□□ -0.48
PHGDH-222ENST00000641587 MB21D1Q8N884 522 aa12.06□□□□□ -0.48
PHGDH-222ENST00000641587 RHPN1Q8TCX5 695 aa12.06□□□□□ -0.48
PHGDH-222ENST00000641587 MROH8Q9H579 483 aa12.06□□□□□ -0.48
PHGDH-222ENST00000641587 XPNPEP3Q9NQH7 507 aa12.06□□□□□ -0.48
PHGDH-222ENST00000641587 TMX2Q9Y320 296 aa12.06□□□□□ -0.48
PHGDH-222ENST00000641587 PQBP1O60828 265 aaKnown RBP12.05□□□□□ -0.48
PHGDH-222ENST00000641587 MBD4O95243 580 aa12.05□□□□□ -0.48
PHGDH-222ENST00000641587 IGHDP01880 384 aa12.05□□□□□ -0.48
PHGDH-222ENST00000641587 FCER1AP12319 257 aa12.05□□□□□ -0.48
PHGDH-222ENST00000641587 FOSL2P15408 326 aa12.05□□□□□ -0.48
PHGDH-222ENST00000641587 SMAD3P84022 425 aaKnown RBP12.05□□□□□ -0.48
PHGDH-222ENST00000641587 TTF1Q15361 905 aaPredicted RBP12.05□□□□□ -0.48
PHGDH-222ENST00000641587 ERC1Q8IUD2 1116 aa12.05□□□□□ -0.48
PHGDH-222ENST00000641587 SIRT2Q8IXJ6 389 aa12.05□□□□□ -0.48
PHGDH-222ENST00000641587 ABRAQ8N0Z2 381 aa12.05□□□□□ -0.48
PHGDH-222ENST00000641587 RNPC3Q96LT9 517 aaKnown RBP12.05□□□□□ -0.48
PHGDH-222ENST00000641587 MMP19Q99542 508 aa12.05□□□□□ -0.48
PHGDH-222ENST00000641587 ARHGEF10LQ9HCE6 1279 aa12.05□□□□□ -0.48
PHGDH-222ENST00000641587 PHF24Q9UPV7 400 aa12.05□□□□□ -0.48
PHGDH-222ENST00000641587 MYH7P12883 1935 aa12.04□□□□□ -0.48
PHGDH-222ENST00000641587 A0A1W2PQ45 241 aaPredicted RBP12.04□□□□□ -0.48
PHGDH-222ENST00000641587 A0A1W2PQY0 241 aa12.04□□□□□ -0.48
PHGDH-222ENST00000641587 WDR46O15213 610 aaKnown RBP12.04□□□□□ -0.48
PHGDH-222ENST00000641587 CLTBP09497 229 aa12.04□□□□□ -0.48
PHGDH-222ENST00000641587 RARBP10826 455 aa12.04□□□□□ -0.48
PHGDH-222ENST00000641587 EEF2P13639 858 aaKnown RBP12.04□□□□□ -0.48
PHGDH-222ENST00000641587 CDK8P49336 464 aa12.04□□□□□ -0.48
PHGDH-222ENST00000641587 IRX5P78411 483 aaPredicted RBP12.04□□□□□ -0.48
PHGDH-222ENST00000641587 C1orf53Q5VUE5 145 aa12.04□□□□□ -0.48
PHGDH-222ENST00000641587 TMED8Q6PL24 325 aaPredicted RBP12.04□□□□□ -0.48
PHGDH-222ENST00000641587 USP38Q8NB14 1042 aa12.04□□□□□ -0.48
PHGDH-222ENST00000641587 SLC5A4Q9NY91 659 aa12.04□□□□□ -0.48
PHGDH-222ENST00000641587 SWAP70Q9UH65 585 aa12.04□□□□□ -0.48
PHGDH-222ENST00000641587 MYADML2A6NDP7 307 aa12.03□□□□□ -0.48
PHGDH-222ENST00000641587 RAD21O60216 631 aa12.03□□□□□ -0.48
PHGDH-222ENST00000641587 ADAMTS4O75173 837 aa12.03□□□□□ -0.48
PHGDH-222ENST00000641587 ZNF865P0CJ78 1059 aaPredicted RBP12.03□□□□□ -0.48
PHGDH-222ENST00000641587 ADD2P35612 726 aa12.03□□□□□ -0.48
PHGDH-222ENST00000641587 ZNF792Q3KQV3 632 aa12.03□□□□□ -0.48
PHGDH-222ENST00000641587 FAM83BQ5T0W9 1011 aa12.03□□□□□ -0.48
PHGDH-222ENST00000641587 RIOX2Q8IUF8 465 aa12.03□□□□□ -0.48
PHGDH-222ENST00000641587 REPS2Q8NFH8 660 aa12.03□□□□□ -0.48
PHGDH-222ENST00000641587 NUP88Q99567 741 aaPredicted RBP12.03□□□□□ -0.48
PHGDH-222ENST00000641587 TINF2Q9BSI4 451 aa12.03□□□□□ -0.48
PHGDH-222ENST00000641587 BOLA2Q9H3K6 86 aa12.03□□□□□ -0.48
PHGDH-222ENST00000641587 ZBTB47Q9UFB7 747 aaPredicted RBP12.03□□□□□ -0.48
PHGDH-222ENST00000641587 ZNF214Q9UL59 606 aaPredicted RBP12.03□□□□□ -0.48
PHGDH-222ENST00000641587 ADAMTS5Q9UNA0 930 aa12.03□□□□□ -0.48
PHGDH-222ENST00000641587 TACC3Q9Y6A5 838 aa12.03□□□□□ -0.48
PHGDH-222ENST00000641587 MCM3APO60318 1980 aa12.03□□□□□ -0.48
PHGDH-222ENST00000641587 GREB1LQ9C091 1923 aaPredicted RBP12.02□□□□□ -0.49
PHGDH-222ENST00000641587 USP17L12C9JPN9 530 aa12.02□□□□□ -0.49
PHGDH-222ENST00000641587 USP17L21D6R901 530 aa12.02□□□□□ -0.49
PHGDH-222ENST00000641587 VWA5AO00534 786 aa12.02□□□□□ -0.49
PHGDH-222ENST00000641587 KIAA0355O15063 1070 aa12.02□□□□□ -0.49
PHGDH-222ENST00000641587 SLC25A27O95847 323 aa12.02□□□□□ -0.49
PHGDH-222ENST00000641587 RAG1P15918 1043 aa12.02□□□□□ -0.49
PHGDH-222ENST00000641587 GRIN2CQ14957 1233 aa12.02□□□□□ -0.49
PHGDH-222ENST00000641587 C12orf60Q5U649 245 aa12.02□□□□□ -0.49
PHGDH-222ENST00000641587 C16orf86Q6ZW13 317 aa12.02□□□□□ -0.49
PHGDH-222ENST00000641587 RNF180Q86T96 592 aa12.02□□□□□ -0.49
PHGDH-222ENST00000641587 CLASRPQ8N2M8 674 aaKnown RBP12.02□□□□□ -0.49
PHGDH-222ENST00000641587 PPIL4Q8WUA2 492 aaKnown RBP eCLIP12.02□□□□□ -0.49
PHGDH-222ENST00000641587 SH2D4AQ9H788 454 aa12.02□□□□□ -0.49
PHGDH-222ENST00000641587 PAG1Q9NWQ8 432 aa12.02□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms