RNA–Protein interactions for RNA: ENST00000638448.1

GYPB-216, Transcript of glycophorin B (MNS blood group), human

APPRIS P1 TSL 1 (best) BASIC

Gene GYPB, Length 363 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
GYPB-216	ENST00000638448	ARID1B	Q8NFD5	2236 aa	Predicted RBP	4.27	□□□□□ -1.73
GYPB-216	ENST00000638448	TMEM265	A0A087WTH1	108 aa		4.27	□□□□□ -1.73
GYPB-216	ENST00000638448	CCDC163	A0A0D9SF12	145 aa		4.27	□□□□□ -1.73
GYPB-216	ENST00000638448	IQCA1L	A6NCM1	817 aa		4.27	□□□□□ -1.73
GYPB-216	ENST00000638448	SLC22A31	A6NKX4	558 aa		4.27	□□□□□ -1.73
GYPB-216	ENST00000638448	UPK3BL1	B0FP48	263 aa		4.27	□□□□□ -1.73
GYPB-216	ENST00000638448	UPK3BL2	E5RIL1	263 aa		4.27	□□□□□ -1.73
GYPB-216	ENST00000638448	BIN1	O00499	593 aa		4.27	□□□□□ -1.73
GYPB-216	ENST00000638448	FANCG	O15287	622 aa		4.27	□□□□□ -1.73
GYPB-216	ENST00000638448	GRIN3B	O60391	1043 aa		4.27	□□□□□ -1.73
GYPB-216	ENST00000638448	GJB6	O95452	261 aa		4.27	□□□□□ -1.73
GYPB-216	ENST00000638448	C8A	P07357	584 aa		4.27	□□□□□ -1.73
GYPB-216	ENST00000638448	NME1	P15531	152 aa	Known RBP	4.27	□□□□□ -1.73
GYPB-216	ENST00000638448	BBS9	Q3SYG4	887 aa		4.27	□□□□□ -1.73
GYPB-216	ENST00000638448	ANGEL2	Q5VTE6	544 aa	Known RBP	4.27	□□□□□ -1.73
GYPB-216	ENST00000638448	OVOS1	Q6IE37	1185 aa		4.27	□□□□□ -1.73
GYPB-216	ENST00000638448	ARMCX6	Q7L4S7	300 aa		4.27	□□□□□ -1.73
GYPB-216	ENST00000638448	SPACA3	Q8IXA5	215 aa		4.27	□□□□□ -1.73
GYPB-216	ENST00000638448	FAM178B	Q8IXR5	827 aa		4.27	□□□□□ -1.73
GYPB-216	ENST00000638448	LILRB2	Q8N423	598 aa		4.27	□□□□□ -1.73
GYPB-216	ENST00000638448	PI4K2B	Q8TCG2	481 aa		4.27	□□□□□ -1.73
GYPB-216	ENST00000638448	ATG4C	Q96DT6	458 aa		4.27	□□□□□ -1.73
GYPB-216	ENST00000638448	SGSM3	Q96HU1	749 aa		4.27	□□□□□ -1.73
GYPB-216	ENST00000638448	PLAA	Q9Y263	795 aa		4.27	□□□□□ -1.73
GYPB-216	ENST00000638448	PRAMEF27	A3QJZ7	478 aa		4.26	□□□□□ -1.73
GYPB-216	ENST00000638448	PPP1R12A	O14974	1030 aa	Predicted RBP	4.26	□□□□□ -1.73
GYPB-216	ENST00000638448	DNAJC6	O75061	913 aa		4.26	□□□□□ -1.73
GYPB-216	ENST00000638448	VIL1	P09327	827 aa	Known RBP	4.26	□□□□□ -1.73
GYPB-216	ENST00000638448	NAT2	P11245	290 aa		4.26	□□□□□ -1.73
GYPB-216	ENST00000638448	YARS	P54577	528 aa	Known RBP	4.26	□□□□□ -1.73
GYPB-216	ENST00000638448	CHMP4BP1	P59074	171 aa		4.26	□□□□□ -1.73
GYPB-216	ENST00000638448	JAG1	P78504	1218 aa		4.26	□□□□□ -1.73
GYPB-216	ENST00000638448	IKZF1	Q13422	519 aa		4.26	□□□□□ -1.73
GYPB-216	ENST00000638448	INPP5A	Q14642	412 aa		4.26	□□□□□ -1.73
GYPB-216	ENST00000638448	TCEA2	Q15560	299 aa		4.26	□□□□□ -1.73
GYPB-216	ENST00000638448	TMEM67	Q5HYA8	995 aa		4.26	□□□□□ -1.73
GYPB-216	ENST00000638448	LARP1B	Q659C4	914 aa	Known RBP	4.26	□□□□□ -1.73
GYPB-216	ENST00000638448	ATG4D	Q86TL0	474 aa	Predicted RBP	4.26	□□□□□ -1.73
GYPB-216	ENST00000638448	MRPL41	Q8IXM3	137 aa	Known RBP	4.26	□□□□□ -1.73
GYPB-216	ENST00000638448	KCT2	Q8NC54	265 aa		4.26	□□□□□ -1.73
GYPB-216	ENST00000638448	ZSWIM2	Q8NEG5	633 aa		4.26	□□□□□ -1.73
GYPB-216	ENST00000638448	FAM168A	Q92567	244 aa		4.26	□□□□□ -1.73
GYPB-216	ENST00000638448	ELMO3	Q96BJ8	720 aa		4.26	□□□□□ -1.73
GYPB-216	ENST00000638448	DHRS1	Q96LJ7	313 aa		4.26	□□□□□ -1.73
GYPB-216	ENST00000638448	SLC26A8	Q96RN1	970 aa		4.26	□□□□□ -1.73
GYPB-216	ENST00000638448	WNT10A	Q9GZT5	417 aa		4.26	□□□□□ -1.73
GYPB-216	ENST00000638448	SPC25	Q9HBM1	224 aa		4.26	□□□□□ -1.73
GYPB-216	ENST00000638448	PRDM7	Q9NQW5	492 aa		4.26	□□□□□ -1.73
GYPB-216	ENST00000638448	FANCL	Q9NW38	375 aa		4.26	□□□□□ -1.73
GYPB-216	ENST00000638448	GTF2IRD1	Q9UHL9	959 aa		4.26	□□□□□ -1.73
GYPB-216	ENST00000638448	ZMYM5	Q9UJ78	669 aa		4.26	□□□□□ -1.73
GYPB-216	ENST00000638448	ZNF214	Q9UL59	606 aa	Predicted RBP	4.26	□□□□□ -1.73
GYPB-216	ENST00000638448	hCG_2014768	A0A024R1R8	64 aa		4.25	□□□□□ -1.73
GYPB-216	ENST00000638448	IGF2BP3	O00425	579 aa	Known RBP eCLIP	4.25	□□□□□ -1.73
GYPB-216	ENST00000638448	DDAH1	O94760	285 aa		4.25	□□□□□ -1.73
GYPB-216	ENST00000638448	EOMES	O95936	686 aa		4.25	□□□□□ -1.73
GYPB-216	ENST00000638448	ACR	P10323	421 aa		4.25	□□□□□ -1.73
GYPB-216	ENST00000638448	PLCG1	P19174	1290 aa		4.25	□□□□□ -1.73
GYPB-216	ENST00000638448	IGBP1	P78318	339 aa		4.25	□□□□□ -1.73
GYPB-216	ENST00000638448	FZD5	Q13467	585 aa		4.25	□□□□□ -1.73
GYPB-216	ENST00000638448	SQSTM1	Q13501	440 aa		4.25	□□□□□ -1.73
GYPB-216	ENST00000638448	PPP2R5E	Q16537	467 aa		4.25	□□□□□ -1.73
GYPB-216	ENST00000638448	NKPD1	Q17RQ9	610 aa		4.25	□□□□□ -1.73
GYPB-216	ENST00000638448	ZNF648	Q5T619	568 aa	Predicted RBP	4.25	□□□□□ -1.73
GYPB-216	ENST00000638448	SLC6A19	Q695T7	634 aa		4.25	□□□□□ -1.73
GYPB-216	ENST00000638448	C6orf15	Q6UXA7	325 aa	Predicted RBP	4.25	□□□□□ -1.73
GYPB-216	ENST00000638448	UNC5A	Q6ZN44	842 aa		4.25	□□□□□ -1.73
GYPB-216	ENST00000638448	MCAT	Q8IVS2	390 aa	Known RBP	4.25	□□□□□ -1.73
GYPB-216	ENST00000638448	LRRC47	Q8N1G4	583 aa	Known RBP	4.25	□□□□□ -1.73
GYPB-216	ENST00000638448	MICAL1	Q8TDZ2	1067 aa		4.25	□□□□□ -1.73
GYPB-216	ENST00000638448	SMARCC1	Q92922	1105 aa	Predicted RBP	4.25	□□□□□ -1.73
GYPB-216	ENST00000638448	GPATCH3	Q96I76	525 aa		4.25	□□□□□ -1.73
GYPB-216	ENST00000638448	FBRS	Q9HAH7	460 aa		4.25	□□□□□ -1.73
GYPB-216	ENST00000638448	METTL14	Q9HCE5	456 aa	Known RBP	4.25	□□□□□ -1.73
GYPB-216	ENST00000638448	PITPNM2	Q9BZ72	1349 aa		4.24	□□□□□ -1.73
GYPB-216	ENST00000638448	ESYT3	A0FGR9	886 aa		4.24	□□□□□ -1.73
GYPB-216	ENST00000638448	CCDC85C	A6NKD9	419 aa		4.24	□□□□□ -1.73
GYPB-216	ENST00000638448	GNAT3	A8MTJ3	354 aa		4.24	□□□□□ -1.73
GYPB-216	ENST00000638448	LRIG2	O94898	1065 aa		4.24	□□□□□ -1.73
GYPB-216	ENST00000638448	SLITRK5	O94991	958 aa		4.24	□□□□□ -1.73
GYPB-216	ENST00000638448	CDK8	P49336	464 aa		4.24	□□□□□ -1.73
GYPB-216	ENST00000638448	SSRP1	Q08945	709 aa	Known RBP	4.24	□□□□□ -1.73
GYPB-216	ENST00000638448	MRM1	Q6IN84	353 aa	Known RBP	4.24	□□□□□ -1.73
GYPB-216	ENST00000638448	SLC23A3	Q6PIS1	610 aa		4.24	□□□□□ -1.73
GYPB-216	ENST00000638448	VHLL	Q6RSH7	139 aa		4.24	□□□□□ -1.73
GYPB-216	ENST00000638448	RUFY4	Q6ZNE9	571 aa		4.24	□□□□□ -1.73
GYPB-216	ENST00000638448	CDC37L1	Q7L3B6	337 aa		4.24	□□□□□ -1.73
GYPB-216	ENST00000638448	ACSF2	Q96CM8	615 aa	Predicted RBP	4.24	□□□□□ -1.73
GYPB-216	ENST00000638448	SLC9A7	Q96T83	725 aa		4.24	□□□□□ -1.73
GYPB-216	ENST00000638448	ANTXR1	Q9H6X2	564 aa		4.24	□□□□□ -1.73
GYPB-216	ENST00000638448	PRDM5	Q9NQX1	630 aa	Predicted RBP	4.24	□□□□□ -1.73
GYPB-216	ENST00000638448	ST7	Q9NRC1	585 aa		4.24	□□□□□ -1.73
GYPB-216	ENST00000638448	TYW1	Q9NV66	732 aa	Known RBP	4.24	□□□□□ -1.73
GYPB-216	ENST00000638448	IFT57	Q9NWB7	429 aa		4.24	□□□□□ -1.73
GYPB-216	ENST00000638448	COL4A3BP	Q9Y5P4	624 aa		4.24	□□□□□ -1.73
GYPB-216	ENST00000638448	CORIN	Q9Y5Q5	1042 aa		4.24	□□□□□ -1.73
GYPB-216	ENST00000638448	SNX11	Q9Y5W9	270 aa		4.24	□□□□□ -1.73
GYPB-216	ENST00000638448	LTBP3	Q9NS15	1303 aa		4.23	□□□□□ -1.73
GYPB-216	ENST00000638448	PRR33	A8MZF0	331 aa		4.23	□□□□□ -1.73
GYPB-216	ENST00000638448	RGS13	O14921	159 aa		4.23	□□□□□ -1.73

Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms